BLASTX nr result

ID: Scutellaria22_contig00019122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00019122
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-l...    72   5e-11
ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-l...    66   3e-09
ref|NP_566515.1| transducin/WD40 domain-containing protein [Arab...    62   6e-08
emb|CBI20340.3| unnamed protein product [Vitis vinifera]               62   8e-08
ref|XP_002885089.1| WD-40 repeat family protein [Arabidopsis lyr...    59   4e-07

>ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-like [Cucumis sativus]
           gi|449498657|ref|XP_004160597.1| PREDICTED: WD
           repeat-containing protein 44-like [Cucumis sativus]
          Length = 918

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 51/141 (36%), Positives = 68/141 (48%), Gaps = 4/141 (2%)
 Frame = -1

Query: 562 PNTNSNDS--LPKFPVCVSQNYDVWMSQPSSVEERRIRLLCQMGLARDPSILRHRPSLSL 389
           PN +S     +PKFP+ VS NYD+W+S+P+SV ERR RLL +MGL+ DPS+ R   +L L
Sbjct: 44  PNYDSEHPFPIPKFPMAVS-NYDIWISEPASVLERRSRLLREMGLSGDPSLSRANTALEL 102

Query: 388 SISSNTFDSLGETSCCDTLNSIDNTSDYVNAYDSCNSNYGASLMVRSKSDG--DCNSHKS 215
                     G +   D L S                      ++RSKSDG  DCN + S
Sbjct: 103 DHKEKGVGDFGRSVSSDYLTS---------------QQQQPPAIIRSKSDGSADCNRNMS 147

Query: 214 SEGYSNNSETGGNDNESDIQS 152
           S   S +      +  S I S
Sbjct: 148 SSQASGSDTNNQCNYSSSISS 168


>ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 880

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
 Frame = -1

Query: 538 LPKFPVCVSQNYDVWMSQPSSVEERRIRLLCQMGLARDPSILRHRPS-------LSLSIS 380
           +PKFP+  S+ YD+W+S+PSS+EERR RLL +MGL+ DPS+ R +P+       +  S+S
Sbjct: 53  IPKFPIGASK-YDIWISEPSSIEERRSRLLREMGLSNDPSLSRVKPTADRSNGDIGRSVS 111

Query: 379 SNTFDSLGETSCCDTLNSIDNTSDYVNA------YDSCNSNYGASLMVRSKSDGDCNS 224
           S+     GE       +  D   D  N+        S  S    S +V S+S G   S
Sbjct: 112 SDRLAGQGEAGVVICRSKSDGAKDQCNSSVCSPPILSICSVVNNSKLVNSRSSGSNGS 169


>ref|NP_566515.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|13937211|gb|AAK50098.1|AF372960_1 AT3g15470/MJK13_13
           [Arabidopsis thaliana] gi|7021732|gb|AAF35413.1| unknown
           protein [Arabidopsis thaliana]
           gi|15795112|dbj|BAB02376.1| WD-40 repeat protein-like
           [Arabidopsis thaliana] gi|19548013|gb|AAL87370.1|
           AT3g15470/MJK13_13 [Arabidopsis thaliana]
           gi|332642159|gb|AEE75680.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 883

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
 Frame = -1

Query: 538 LPKFPVCVSQNYDVWMSQPSSVEERRIRLLCQMGLARDPSILRHRPSLSLSISSNTFDSL 359
           +P+FP+  S+ +DVW S+P+SV ERR +LL +MGL+RDP + R +P    S S +T  + 
Sbjct: 72  VPRFPMGASK-FDVWTSEPASVSERRSKLLNEMGLSRDPVLSRLKPVSDSSSSKDTGAAG 130

Query: 358 GETSCCDTLNSIDNTSDYVNAYDSCNSNYG--ASLMVRSKSD 239
            E S   + N +         +  C+ + G  AS +VRSKSD
Sbjct: 131 FEISRSISCNQLARRD-----HGECSESVGGCASCIVRSKSD 167


>emb|CBI20340.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score = 61.6 bits (148), Expect = 8e-08
 Identities = 28/51 (54%), Positives = 40/51 (78%)
 Frame = -1

Query: 538 LPKFPVCVSQNYDVWMSQPSSVEERRIRLLCQMGLARDPSILRHRPSLSLS 386
           +PKFP+  S+ YD+W+S+PSS+EERR RLL +MGL+ DPS+ R +P+   S
Sbjct: 53  IPKFPIGASK-YDIWISEPSSIEERRSRLLREMGLSNDPSLSRVKPTADRS 102


>ref|XP_002885089.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330929|gb|EFH61348.1| WD-40 repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 885

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
 Frame = -1

Query: 538 LPKFPVCVSQNYDVWMSQPSSVEERRIRLLCQMGLARDPSILRHRPSLSLSISSNTFDSL 359
           +P+FP+  S+ +DVW+S+P+SV ERR +LL +MGL+RDP + R +P   +S SS+     
Sbjct: 71  VPRFPMGASK-FDVWISEPASVSERRSKLLNEMGLSRDPVLSRLKP---VSDSSSKETGA 126

Query: 358 GETSCCDTLNSIDNTSDYVNAYDSCNSNYG--ASLMVRSKSD 239
           G +   D   SI         +  C    G  AS +VRSKSD
Sbjct: 127 GSS---DISRSISCNQLARRDHGECFETVGGCASCIVRSKSD 165


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