BLASTX nr result

ID: Scutellaria22_contig00018946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00018946
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518953.1| ubiquitin-protein ligase, putative [Ricinus ...   126   2e-27
ref|XP_002317039.1| predicted protein [Populus trichocarpa] gi|1...   122   3e-26
ref|XP_002300525.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|NP_566045.1| RING/U-box domain-containing protein [Arabidops...   114   1e-23
gb|AAM64995.1| unknown [Arabidopsis thaliana]                         114   1e-23

>ref|XP_002518953.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223541940|gb|EEF43486.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 247

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/114 (56%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
 Frame = +2

Query: 2   QVAANVVSPDSQ--TNYWVWRVDPALRAQDRERGCFSPLWVAFXXXXXXXXXXXXXXVTL 175
           +VA NV  P+SQ  TNYWVWRVDP  R +D ERGCFSPLWVAF              +TL
Sbjct: 134 EVAVNVSPPESQPSTNYWVWRVDPTFRPRDPERGCFSPLWVAFSILIGGLLLDVLISITL 193

Query: 176 GVSALPVNXXXXXXXXXXXXTALRLGLEFCQEWNVRRVVQRVEASGSIGYHPAL 337
           GVSALPVN            TALRL LEFC EW+ RRVVQRV+++  +GYH AL
Sbjct: 194 GVSALPVNIIIGVIVVLGLGTALRLALEFCHEWSFRRVVQRVDSNVPLGYHAAL 247


>ref|XP_002317039.1| predicted protein [Populus trichocarpa] gi|118484049|gb|ABK93910.1|
           unknown [Populus trichocarpa]
           gi|222860104|gb|EEE97651.1| predicted protein [Populus
           trichocarpa]
          Length = 253

 Score =  122 bits (307), Expect = 3e-26
 Identities = 61/113 (53%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
 Frame = +2

Query: 5   VAANVVSPDSQ---TNYWVWRVDPALRAQDRERGCFSPLWVAFXXXXXXXXXXXXXXVTL 175
           VA NV  P+SQ    NYWVWR+DP  R +DR+RGCFSPLWVAF              +TL
Sbjct: 140 VAVNVSPPESQPIQANYWVWRIDPNFRPRDRDRGCFSPLWVAFSILIGGLLLDVLISITL 199

Query: 176 GVSALPVNXXXXXXXXXXXXTALRLGLEFCQEWNVRRVVQRVEASGSIGYHPA 334
           GVSALPVN            TALRL LEFC EW+ RR VQR +A+ + GYHPA
Sbjct: 200 GVSALPVNIIIGVIVVLGLGTALRLALEFCHEWSFRRAVQRADANENHGYHPA 252


>ref|XP_002300525.1| predicted protein [Populus trichocarpa] gi|222847783|gb|EEE85330.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/113 (53%), Positives = 71/113 (62%), Gaps = 2/113 (1%)
 Frame = +2

Query: 5   VAANVVSPDSQ--TNYWVWRVDPALRAQDRERGCFSPLWVAFXXXXXXXXXXXXXXVTLG 178
           VA NV  P+SQ  TNYWVWR+DP LR +D  RGCFSPLWVAF              +TLG
Sbjct: 75  VAVNVSPPESQPSTNYWVWRIDPNLRPRDHNRGCFSPLWVAFSILTGGLLLDVLISITLG 134

Query: 179 VSALPVNXXXXXXXXXXXXTALRLGLEFCQEWNVRRVVQRVEASGSIGYHPAL 337
           VSALPVN            TALRL L+FC +W+ RR VQR +A+ + GYHPAL
Sbjct: 135 VSALPVNIIIGVIVVLGLGTALRLALDFCIKWSFRRPVQRADANVNHGYHPAL 187


>ref|NP_566045.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|2979545|gb|AAC06154.1| expressed protein [Arabidopsis
           thaliana] gi|27311551|gb|AAO00741.1| Unknown protein
           [Arabidopsis thaliana] gi|30023706|gb|AAP13386.1|
           At2g45530 [Arabidopsis thaliana]
           gi|330255472|gb|AEC10566.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 240

 Score =  114 bits (285), Expect = 1e-23
 Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 8/119 (6%)
 Frame = +2

Query: 5   VAANVVSPDSQ--TNYWVWRVDPALRAQDRERGCFSPLWVAFXXXXXXXXXXXXXXVTLG 178
           VA NV  P++Q  TNYWVWR+DP+ R ++RERGCFSPLWVAF              +TLG
Sbjct: 122 VAVNVTPPETQPTTNYWVWRIDPSYRQEERERGCFSPLWVAFSILIGGLMLDVLISITLG 181

Query: 179 VSALPVNXXXXXXXXXXXXTALRLGLEFCQEWNVR----RVVQRVEAS--GSIGYHPAL 337
           VSALPVN            TALRL LEFC EW++R    R VQR EA+   +I Y PAL
Sbjct: 182 VSALPVNIIIGVIVVLGLGTALRLTLEFCYEWSLRRAVHRAVQRAEANNFSNIAYPPAL 240


>gb|AAM64995.1| unknown [Arabidopsis thaliana]
          Length = 240

 Score =  114 bits (285), Expect = 1e-23
 Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 8/119 (6%)
 Frame = +2

Query: 5   VAANVVSPDSQ--TNYWVWRVDPALRAQDRERGCFSPLWVAFXXXXXXXXXXXXXXVTLG 178
           VA NV  P++Q  TNYWVWR+DP+ R ++RERGCFSPLWVAF              +TLG
Sbjct: 122 VAVNVTPPETQPTTNYWVWRIDPSYRQEERERGCFSPLWVAFSILIGGLMLDVLISITLG 181

Query: 179 VSALPVNXXXXXXXXXXXXTALRLGLEFCQEWNVR----RVVQRVEAS--GSIGYHPAL 337
           VSALPVN            TALRL LEFC EW++R    R VQR EA+   +I Y PAL
Sbjct: 182 VSALPVNIIIGVIVVLGLGTALRLTLEFCYEWSLRRAVHRAVQRAEANNFSNIAYPPAL 240


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