BLASTX nr result

ID: Scutellaria22_contig00018868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00018868
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_003520114.1| PREDICTED: pentatricopeptide repeat-containi...    86   2e-15
ref|XP_002512079.1| pentatricopeptide repeat-containing protein,...    86   4e-15
emb|CBI27289.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15

>ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|222851159|gb|EEE88706.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 57/121 (47%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
 Frame = -1

Query: 353 SFLQPSIFA----PNRTTQSRETIKPKFPDIRTSNPVQQDQKSDLESTLQRSLLNNNTDE 186
           SFLQP+IFA    P  TT    T   + P I T     QD  ++LESTL +SL+ NNT+E
Sbjct: 25  SFLQPTIFALKKTPPSTTNPATTTNRQTPKILT-----QDHITNLESTLHKSLITNNTNE 79

Query: 185 AWXXXXXXXXXXXXXXXXXXXPLTNSLITHLSSFSDTLNLKRAYASVVFVLEKNPSLLEY 6
           AW                    LTNSLITHLSS +DT+NLKRA+AS+V+V+EKNP  L++
Sbjct: 80  AWASFKSLTSNSAFPSKS----LTNSLITHLSSLNDTINLKRAFASIVYVIEKNPKSLDF 135

Query: 5   Q 3
           +
Sbjct: 136 E 136


>ref|XP_003520114.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g69290-like [Glycine max]
          Length = 624

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/117 (44%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 SFLQPSIFA-PNRTTQSRETIKPKFPDIRTSNPVQQDQKSDLESTLQRSLLNNNTDEAWX 177
           SFLQPS+FA   +  Q      PK P + +S+     Q S L++TLQ SL  +NTDEAW 
Sbjct: 27  SFLQPSVFALTKKQHQPNSEPSPKSPTLLSSS-----QLSTLQTTLQNSLTRSNTDEAWK 81

Query: 176 XXXXXXXXXXXXXXXXXXPLTNSLITHLSSFSDTLNLKRAYASVVFVLEKNPSLLEY 6
                              LTNSL+ HLSS  DTLNLKRA+AS +F++EKNP L+++
Sbjct: 82  SFKTLTTHHSFPPKT----LTNSLLIHLSSLGDTLNLKRAFASTLFLMEKNPMLIDH 134


>ref|XP_002512079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549259|gb|EEF50748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 650

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 53/118 (44%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
 Frame = -1

Query: 353 SFLQPSIFAPNR-TTQSRETIKPKFPDIRTSNPVQQDQKSDLESTLQRSLLNNNTDEAWX 177
           SFLQP+IF   + TT    T  P  P +++ N    D  + LEST+  SLL N+TD+AW 
Sbjct: 22  SFLQPTIFTLKKPTTDPTNTTPP--PTLQSLN---LDHVATLESTIHNSLLTNDTDQAWK 76

Query: 176 XXXXXXXXXXXXXXXXXXPLTNSLITHLSSFSDTLNLKRAYASVVFVLEKNPSLLEYQ 3
                              L NSLITHLSS  DTLNLKRA+ASV+F +EKNP  L+++
Sbjct: 77  SFKFLTSNSSYFPSKS---LANSLITHLSSLQDTLNLKRAFASVIFFMEKNPQSLDFE 131


>emb|CBI27289.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 51/116 (43%), Positives = 62/116 (53%)
 Frame = -1

Query: 353 SFLQPSIFAPNRTTQSRETIKPKFPDIRTSNPVQQDQKSDLESTLQRSLLNNNTDEAWXX 174
           SFLQPS+F+      +     P+ P   +  P+Q     DLES L  SL  NNTDEAW  
Sbjct: 29  SFLQPSLFSLKPIPSA-----PRSPHPTSPKPLQSPAPEDLESALHTSLSTNNTDEAWKS 83

Query: 173 XXXXXXXXXXXXXXXXXPLTNSLITHLSSFSDTLNLKRAYASVVFVLEKNPSLLEY 6
                             L NSLI HL+S  D  NLKRA+AS VF+LEKNPSLL++
Sbjct: 84  FKALTTNSTFPSKS----LANSLIAHLASLHDLYNLKRAFASAVFLLEKNPSLLDF 135


>ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290
           [Vitis vinifera]
          Length = 655

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 51/116 (43%), Positives = 62/116 (53%)
 Frame = -1

Query: 353 SFLQPSIFAPNRTTQSRETIKPKFPDIRTSNPVQQDQKSDLESTLQRSLLNNNTDEAWXX 174
           SFLQPS+F+      +     P+ P   +  P+Q     DLES L  SL  NNTDEAW  
Sbjct: 29  SFLQPSLFSLKPIPSA-----PRSPHPTSPKPLQSPAPEDLESALHTSLSTNNTDEAWKS 83

Query: 173 XXXXXXXXXXXXXXXXXPLTNSLITHLSSFSDTLNLKRAYASVVFVLEKNPSLLEY 6
                             L NSLI HL+S  D  NLKRA+AS VF+LEKNPSLL++
Sbjct: 84  FKALTTNSTFPSKS----LANSLIAHLASLHDLYNLKRAFASAVFLLEKNPSLLDF 135


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