BLASTX nr result

ID: Scutellaria22_contig00018779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00018779
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280902.1| PREDICTED: uncharacterized WD repeat-contain...    65   6e-09
ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798...    59   3e-07
ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotei...    56   4e-06

>ref|XP_002280902.1| PREDICTED: uncharacterized WD repeat-containing protein alr3466
           [Vitis vinifera] gi|297734510|emb|CBI15757.3| unnamed
           protein product [Vitis vinifera]
          Length = 526

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 19/116 (16%)
 Frame = -3

Query: 291 SGDNLNVSRTPSSPLSKY-----EDSSPKQTQSRPQLLIPALTSNISRPMKTKDSGS--- 136
           S DNL  SR+P    +K        +SP Q QSRP+LLIPA+   IS+P+K  D+G+   
Sbjct: 76  SKDNLVSSRSPLDNGTKKVKVERRSTSPLQLQSRPELLIPAVNPKISQPVKLADAGTRAR 135

Query: 135 -----------KSKGEKASRITSEPETMDDQPKRNKRKLEETIHKDVIKLIGKSSS 1
                      K K EK+   +SE E ++ Q K  KRK E   HK++I  I  SSS
Sbjct: 136 SPTPNHAHSVGKVKWEKSHGSSSEREMVEVQDKGTKRKFEPKEHKELITSIATSSS 191


>ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798141 [Glycine max]
          Length = 1494

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 26/128 (20%)
 Frame = -3

Query: 306 NTVKPSGDNLNVSRTPSSPLSKYEDSSPKQTQSRPQLLIPALTSNISRPMKTKDSGSK-- 133
           +T+    + L      SSP+ + E S+  Q QS+P+LLIP+L   IS+P+    S SK  
Sbjct: 71  STLDDGIETLKTKSRSSSPIDRNEVSTKSQHQSKPELLIPSLNPKISQPVLLPKSSSKAS 130

Query: 132 --------------------SKGE----KASRITSEPETMDDQPKRNKRKLEETIHKDVI 25
                               S+G+    +++R++SE +  + + K  KRK E+  HK++I
Sbjct: 131 ITSSSEATPGVHNSPITGGSSRGKSDKSQSNRLSSEQQKTEVKEKGTKRKFEQKGHKELI 190

Query: 24  KLIGKSSS 1
            L+ KSSS
Sbjct: 191 PLVRKSSS 198


>ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
           [Glycine max]
          Length = 533

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 26/119 (21%)
 Frame = -3

Query: 279 LNVSRTPSSPLSKYEDSSPKQTQSRPQLLIPALTSNISRPMKTKDS-------------- 142
           L   R  +SP+ + E S+  + QS+P+LLIP+    IS+P+    S              
Sbjct: 80  LKTERRSNSPIDRNEGSTKNRHQSKPELLIPSANPKISQPVLLPKSFSKASITSSSEATP 139

Query: 141 --------GSKSKGEK----ASRITSEPETMDDQPKRNKRKLEETIHKDVIKLIGKSSS 1
                   G  S+G+     ++R++SE +  + + K  KRK E+  HK++I LI KSSS
Sbjct: 140 GVHSSPITGGSSRGKSDKSHSNRLSSEQQKTEVKEKGTKRKFEQKEHKELIPLIRKSSS 198


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