BLASTX nr result

ID: Scutellaria22_contig00018560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00018560
         (1212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151183.1| PREDICTED: translation initiation factor IF-...   144   6e-32
emb|CAN76368.1| hypothetical protein VITISV_024584 [Vitis vinifera]   140   6e-31
ref|XP_003634785.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   139   2e-30
ref|XP_002317604.1| predicted protein [Populus trichocarpa] gi|2...   118   3e-24
ref|XP_003531521.1| PREDICTED: translation initiation factor IF-...   115   3e-23

>ref|XP_004151183.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
            [Cucumis sativus] gi|449528237|ref|XP_004171112.1|
            PREDICTED: translation initiation factor IF-2,
            chloroplastic-like [Cucumis sativus]
          Length = 1023

 Score =  144 bits (362), Expect = 6e-32
 Identities = 113/316 (35%), Positives = 157/316 (49%), Gaps = 17/316 (5%)
 Frame = +3

Query: 315  TLNMVSLASQMNLGGVNKISFCNFHGSVFRDKRVSSYRNGSSFSMFWSGKRWKYVDV--- 485
            T  M S+AS  NL GV  +       S FR   +S  R G     F    RW YV     
Sbjct: 11   TGTMASVASLFNLSGVGVVGSSEKPRSQFRGVCLS--RRG-----FKGSNRWYYVSFPLC 63

Query: 486  RRRYATTNFVAEQGTFVSLDS-TYRCSKDYDDADAFLTAPLKPVLMSGSKVDPILSM--- 653
            +    TT+FVA+QG  +S+DS +YR SK+ D+ D  L    KPVL +     P++ +   
Sbjct: 64   KYSATTTDFVADQGNAISVDSNSYRRSKEDDNTDFLLKPAPKPVLKAAES-KPLVGLNKV 122

Query: 654  AWDERKFSG-SLDDEEMSDGEMERSKVFESIGKVLEKVEKLET----SEKVNDPVSKPLV 818
             W+  K +G S  + ++ D E ERSK+ ES+G+VLEK EKLET    + K    V  P  
Sbjct: 123  TWESPKTNGDSNSNRKLLDDEEERSKMIESLGEVLEKAEKLETPKLGNRKPGRGVDTPTT 182

Query: 819  NKIVEQKNGEPVDSVGKSNRKYKTLKSVWRKGNPVATVQKVVNKSRKQESWTDERVDGSK 998
            + +    N +PV+S+  +NRKYKTLKSVWRKG+ VA+VQK+V +  K +   + +  G+ 
Sbjct: 183  SSL--GSNSKPVNSM--ANRKYKTLKSVWRKGDTVASVQKIVAEPSKPKDEVEAKPRGTS 238

Query: 999  SVAP-----LRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAVAKSSAGSDTDLEAK 1163
             V P      +                                   A  +A  +T+  AK
Sbjct: 239  KVEPQSRAAFQPPQPPVKPQPKLQEKPLAATPPILKKPVVLKDVGAATMTADDETNTAAK 298

Query: 1164 TTERKPILVDKFASKK 1211
            T ERKPIL+DK+ASKK
Sbjct: 299  TKERKPILIDKYASKK 314


>emb|CAN76368.1| hypothetical protein VITISV_024584 [Vitis vinifera]
          Length = 1005

 Score =  140 bits (353), Expect = 6e-31
 Identities = 118/310 (38%), Positives = 154/310 (49%), Gaps = 14/310 (4%)
 Frame = +3

Query: 324  MVSLASQMNLGGVNKISFCNFHGSVFRDKRVSSYRNGSSFSMFWSGKRWKYVDVRRRYAT 503
            M SLAS ++LG     S  +F GS+   +RVS  R       F  GKRW  V V +   T
Sbjct: 1    MASLASLVSLGSAGASSSGHFEGSLLLQRRVSLLRRN-----FGGGKRWGLVSVCKYSGT 55

Query: 504  -TNFVAEQGTFVSLDS-TYRCS-KDYDDADAFLTAPLKPVLMSGSKVDPILSMAWDE-RK 671
             TN +AE+G  VS+DS TYR   KD D+      AP KPVL   + V     ++WD   K
Sbjct: 56   MTNVIAEEGNAVSVDSSTYRGGGKDEDNGLVLKPAP-KPVLKPVNSV-----VSWDAGSK 109

Query: 672  FSGSLDDEEMSDGEMERSKVFESIGKVLEKVEKLET-------SEKVNDPVSKPLVNKIV 830
             SG  DD+E  +   ER+KV ES+G+VLEK EKLET       S++ +  V K       
Sbjct: 110  ISGDSDDDEKLENVDERNKVIESLGEVLEKAEKLETGRLGELGSKRESGSVDKSPPGTND 169

Query: 831  EQKNGEPVDSVGKSNRKYKTLKSVWRKGNPVATVQKVVNKSRKQESWTDE---RVDGSKS 1001
                G  V++   +++K KTLKSVWRKGNPVATV+KVV  +    + T+     +    +
Sbjct: 170  NSTVGRTVNN-SNASKKSKTLKSVWRKGNPVATVEKVVKDASNNITNTEREGPEIPLRPT 228

Query: 1002 VAPLRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAVAKSSAGSDTDLEAKTTERKP 1181
              PLR+                                A  KSS   +TD   KT ERKP
Sbjct: 229  QPPLRA-----QPKLQAKPSVAPPPPVLKKPVILKDVGAAPKSSGIDETD-SGKTRERKP 282

Query: 1182 ILVDKFASKK 1211
            IL+DKFASK+
Sbjct: 283  ILIDKFASKR 292


>ref|XP_003634785.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor IF-2,
            chloroplastic-like [Vitis vinifera]
          Length = 1047

 Score =  139 bits (349), Expect = 2e-30
 Identities = 122/322 (37%), Positives = 156/322 (48%), Gaps = 26/322 (8%)
 Frame = +3

Query: 324  MVSLASQMNLGGVNKISFCNFHGSVFRDKRVSSYRNGSSFSMFWSGKRWKYVDVRRRYAT 503
            M SLAS ++LG     S  +F GS+   +RVS  R       F  GKRW  V V +   T
Sbjct: 1    MASLASLVSLGSAGASSSGHFEGSLLLQRRVSLSRRN-----FGGGKRWGLVSVCKYSGT 55

Query: 504  -TNFVAEQGTFVSLDS-TYRCS-KDYDDADAFLTAPLKPVLMSGSKVDPILSMAWDE-RK 671
             TN +AE+G  VS+DS TYR   KD D+      AP KPVL   + V     ++WD   K
Sbjct: 56   MTNVIAEEGNAVSVDSSTYRGGGKDEDNGLVLKPAP-KPVLKPVNSV-----VSWDAGSK 109

Query: 672  FSGSLDDEEMSDGEMERSKVFESIGKVLEKVEKLET-------SEKVNDPVSKPLVNKIV 830
             SG  DD+E  +   ER+KV ES+G+VLEK EKLET       S++ +  V K       
Sbjct: 110  ISGDSDDDEKLENVDERNKVIESLGEVLEKAEKLETGRLGELGSKRESGSVDKSPPGTND 169

Query: 831  EQKNGEPVDSVGKSNRKYKTLKSVWRKGNPVATVQKVVNKS---------------RKQE 965
                G  V++   +++K KTLKSVWRKGNPVATV+KVV  +               RK E
Sbjct: 170  NSTVGRTVNN-SNASKKSKTLKSVWRKGNPVATVEKVVKDASNNITNTEREGPEVGRKVE 228

Query: 966  SWTDERVDGSKSVAPLRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAVAKSSAGSD 1145
              T  R+    +  PLR+                                A  KSS   +
Sbjct: 229  --TQPRIPLRPTQPPLRA-----QPKLQAKPSVAPPPPVLKKPVILKDVGAAPKSSGIDE 281

Query: 1146 TDLEAKTTERKPILVDKFASKK 1211
            TD   KT ERKPIL+DKFASK+
Sbjct: 282  TD-SGKTRERKPILIDKFASKR 302


>ref|XP_002317604.1| predicted protein [Populus trichocarpa] gi|222860669|gb|EEE98216.1|
            predicted protein [Populus trichocarpa]
          Length = 1031

 Score =  118 bits (295), Expect = 3e-24
 Identities = 117/325 (36%), Positives = 147/325 (45%), Gaps = 29/325 (8%)
 Frame = +3

Query: 324  MVSLASQMNLGGVN---KISFCNFHGSVFRDKRVSSYRNGSSFSMFWSGKRWKYVDVRRR 494
            M SLAS M+LG ++     S C    S    KRVS  +           KRW  V  +  
Sbjct: 1    MPSLASLMSLGSLSVSTASSSCVESSSYSVLKRVSLSKRSLR-----KAKRWDCV-CKYS 54

Query: 495  YATTNFVAEQGTFVSLDS---TYRCSKDYDDADAFLTAPLKPVLMS--GSKVDPILSM-- 653
              TT+F+AEQG  VSLDS   T R   D D       AP KPVL S  GSK +  LSM  
Sbjct: 55   VTTTDFIAEQGNAVSLDSSSSTIRGGSDGDSEVVLKPAP-KPVLKSPAGSKDETPLSMNS 113

Query: 654  -AWDERKFSGSLDDEEMSDGEMERSKVFESIGKVLEKVEKLETSE--KVNDPVS-----K 809
              W      G  D E   + E ER+KV ES+G+VLEK EKLETS+  +V    S      
Sbjct: 114  VGWGSSSAGGDSDGERSDEEEGERNKVIESLGEVLEKAEKLETSKLSQVGGSASSNRKQN 173

Query: 810  PLVNKIVEQKNGEPVDSVGKS--NRKYKTLKSVWRKGNPVATVQKVVNK----SRKQESW 971
             +VNK++    G    +V  S  N K KTLKSVWRKG+ VA + KVV +    S +    
Sbjct: 174  GVVNKMISPNVGNDSRNVNSSAANMKTKTLKSVWRKGDSVAALPKVVKEVPKASNRVIKG 233

Query: 972  TDERVDGSK----SVAPLR-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAVAKSSA 1136
              + V+G+K    S  PL+                                  A  KS  
Sbjct: 234  EPKTVEGAKLESQSTVPLKPPQPPLRPQPKLQGKPSVAPPPMIKKPVILKDVGAAPKSPV 293

Query: 1137 GSDTDLEAKTTERKPILVDKFASKK 1211
              +T   A  ++ +PILVDKFA KK
Sbjct: 294  KDETGSRAPQSKGQPILVDKFARKK 318


>ref|XP_003531521.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
            [Glycine max]
          Length = 1010

 Score =  115 bits (287), Expect = 3e-23
 Identities = 110/317 (34%), Positives = 149/317 (47%), Gaps = 15/317 (4%)
 Frame = +3

Query: 306  GYITLNMVSLASQMNLGGVNKISFCNFHGSVFRDKRVSSYRNGSSFSMFWSGKRWKYVDV 485
            G +   M S AS ++LG +  +S      SV R  RVS  R           KRW  V +
Sbjct: 6    GNVQGTMTSFASPVSLGNLMGVSSSGRSHSVVR--RVSLSRGNCR-----GRKRWHCVSL 58

Query: 486  ---RRRYATTNFVAEQGTFVSLDSTYRCSKDYDDADAF-LTAPLKPVLMSG-SKVDPILS 650
               R    TT+FVA+QG  VSLDS    SK  DD   F L  P KPVL S  +K DPIL 
Sbjct: 59   SVCRYSVTTTDFVADQGNSVSLDSNSSRSKGGDDGAGFVLKPPPKPVLKSPENKSDPILG 118

Query: 651  MAWDERKFSGSLDDEEMSDGEMERSKVFESIGKVLEKVEKLETS----EKVNDPVSKPL- 815
             +    + +G ++         ER+KV ES+G+VLEK EKL +S    ++ N  V+KP+ 
Sbjct: 119  PS----RTTGDVE---------ERNKVIESLGEVLEKAEKLGSSKVNGDRNNGSVNKPVR 165

Query: 816  VNKIVEQKNGEPVDSVGKSNRKYKTLKSVWRKGNPVATVQKVVNK-----SRKQESWTDE 980
             N     K  +PV+S     +K KTLKSVWRKG+ VA+VQKVV +     + K E    +
Sbjct: 166  SNANASPKADKPVNSAAP--QKSKTLKSVWRKGDTVASVQKVVKEVPKPINDKNEGERTQ 223

Query: 981  RVDGSKSVAPLRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAVAKSSAGSDTDLEA 1160
               G K V+   +                                 +    A   T +++
Sbjct: 224  TRGGEKVVSQTHAPQPSLKPQPPSQPQPMLLSKPSIAPPPAKKPVVLKDRGAAETTSVKS 283

Query: 1161 KTTERKPILVDKFASKK 1211
            K  ++ PIL+DKFASKK
Sbjct: 284  K-EKKSPILIDKFASKK 299


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