BLASTX nr result

ID: Scutellaria22_contig00018418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00018418
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE06272.1| cyclin D [Scutellaria baicalensis]                    184   7e-45
gb|ACY82355.1| transcription factor cyclin D3b [Opithandra dingh...   164   7e-39
emb|CAB61223.1| cyclin D3b [Antirrhinum majus]                        150   1e-34
dbj|BAE80325.1| cyclin D3-2 [Camellia sinensis]                       120   9e-26
ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]           111   5e-23

>dbj|BAE06272.1| cyclin D [Scutellaria baicalensis]
          Length = 372

 Score =  184 bits (467), Expect = 7e-45
 Identities = 87/133 (65%), Positives = 103/133 (77%), Gaps = 1/133 (0%)
 Frame = -3

Query: 398 MVAHFLEQQSLLQNPVFDALYCDEQHFDDDLDG-GFALKGPPIQDFNEIHHNPFVFLSEH 222
           MV+ F E +SLLQNP+FDALYCDE+ FD+ + G G   K P I DFNEIH+NPF FL EH
Sbjct: 1   MVSEFQEHESLLQNPIFDALYCDEERFDECVGGAGSGFKEPEINDFNEIHNNPFAFLFEH 60

Query: 221 DLFWEDEEISTLLSKERKQVRLSSDFVNSNGSLKMERNEAIKWMLKVVAHYGFTSMTAVL 42
           DLFWE EE+  LL+KE+ Q  L+ D +NS+ SLK  RNEAI WMLKV+AHYGF ++TAVL
Sbjct: 61  DLFWESEELDALLTKEKTQTHLTFDEINSDASLKAMRNEAINWMLKVIAHYGFNALTAVL 120

Query: 41  AVNYYDRFIASPC 3
           AVNYYDRFI S C
Sbjct: 121 AVNYYDRFITSVC 133


>gb|ACY82355.1| transcription factor cyclin D3b [Opithandra dinghushanensis]
          Length = 163

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/125 (62%), Positives = 97/125 (77%)
 Frame = -3

Query: 380 EQQSLLQNPVFDALYCDEQHFDDDLDGGFALKGPPIQDFNEIHHNPFVFLSEHDLFWEDE 201
           EQ+SLLQN +FDALYC+E+  D+D   GF LK P I+DF EI  NP  FL E DLFWED+
Sbjct: 2   EQESLLQNSIFDALYCEEERIDEDSSTGFDLKKPEIEDFREICGNPPSFLFERDLFWEDD 61

Query: 200 EISTLLSKERKQVRLSSDFVNSNGSLKMERNEAIKWMLKVVAHYGFTSMTAVLAVNYYDR 21
           E+S+LLSKE+ Q RLS + +  +G LKM R+EAI W+LKV++HYGF ++TA LAVNYYDR
Sbjct: 62  EVSSLLSKEQTQARLSFEEIKVDGCLKMVRHEAIVWILKVISHYGFNALTAALAVNYYDR 121

Query: 20  FIASP 6
           FI SP
Sbjct: 122 FIVSP 126


>emb|CAB61223.1| cyclin D3b [Antirrhinum majus]
          Length = 361

 Score =  150 bits (378), Expect = 1e-34
 Identities = 78/133 (58%), Positives = 96/133 (72%), Gaps = 10/133 (7%)
 Frame = -3

Query: 377 QQSLLQNPVFDALYCDEQHFDDDLDGGFALKGPPIQDFNEIHHN-----PFV-FLSEHDL 216
           QQ+ LQNP+FDAL C+E+HFD+DLD G  LK P     N+IHHN     PF  FL EHDL
Sbjct: 7   QQTHLQNPIFDALLCNEEHFDEDLDLGSGLKDPGF--INQIHHNQKKEEPFTTFLFEHDL 64

Query: 215 FWEDEEISTLLSKERKQVRLS----SDFVNSNGSLKMERNEAIKWMLKVVAHYGFTSMTA 48
            WED+E+  LLSKE++Q + +     D ++S+G LK  RNE IKWMLKV+ HYGF +MTA
Sbjct: 65  LWEDDELVNLLSKEKEQEQQAHLGYDDVMDSDGFLKRVRNEGIKWMLKVIGHYGFNAMTA 124

Query: 47  VLAVNYYDRFIAS 9
           VLAVNYYDRFI +
Sbjct: 125 VLAVNYYDRFITN 137


>dbj|BAE80325.1| cyclin D3-2 [Camellia sinensis]
          Length = 372

 Score =  120 bits (302), Expect = 9e-26
 Identities = 66/133 (49%), Positives = 93/133 (69%), Gaps = 2/133 (1%)
 Frame = -3

Query: 401 KMVAHFLEQQSLLQNP--VFDALYCDEQHFDDDLDGGFALKGPPIQDFNEIHHNPFVFLS 228
           K ++ + EQ S LQNP  VFD LYC+E+HF+DDL G + L+     + +E    P VFL 
Sbjct: 2   KRMSPYPEQDSHLQNPMFVFDGLYCEEEHFEDDL-GEYGLEQGS-DNCDENVKGPLVFL- 58

Query: 227 EHDLFWEDEEISTLLSKERKQVRLSSDFVNSNGSLKMERNEAIKWMLKVVAHYGFTSMTA 48
           EHD  W+D+E+ +L+SKE K+  L    +NS+ SL + R E++ W+L+V+AHYGFT +T 
Sbjct: 59  EHDWDWDDDELVSLISKE-KETHLGLSVLNSDESLMVARRESVDWILRVIAHYGFTVLTT 117

Query: 47  VLAVNYYDRFIAS 9
           VLAVNY+DRFI+S
Sbjct: 118 VLAVNYFDRFISS 130


>ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]
          Length = 372

 Score =  111 bits (278), Expect = 5e-23
 Identities = 61/129 (47%), Positives = 85/129 (65%), Gaps = 3/129 (2%)
 Frame = -3

Query: 380 EQQSLLQNPVF--DALYCDEQHFDDDLDGGFALKGPPIQDFNEIHHNPF-VFLSEHDLFW 210
           EQ++L QN  F  D LYC+E+ F DD DG         +   E   + F + L EHDLFW
Sbjct: 5   EQETLSQNAPFFLDGLYCEEERFGDDDDGEVEEASEIEKCDREKKQSLFPLTLLEHDLFW 64

Query: 209 EDEEISTLLSKERKQVRLSSDFVNSNGSLKMERNEAIKWMLKVVAHYGFTSMTAVLAVNY 30
           ED+E+ +L+SKE +     S  + S+G L + R +A++WMLKV AHYGF+++TAVLAVNY
Sbjct: 65  EDDELCSLISKEEQAHHCYSGII-SDGFLTVARTKAVEWMLKVNAHYGFSALTAVLAVNY 123

Query: 29  YDRFIASPC 3
           +DRF++S C
Sbjct: 124 FDRFLSSSC 132


Top