BLASTX nr result

ID: Scutellaria22_contig00018112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00018112
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|NP_177599.1| pentatricopeptide repeat-containing protein [Ar...    75   4e-12
tpg|DAA64067.1| TPA: putative pentatricopeptide repeat family pr...    75   7e-12
emb|CBI29241.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12

>ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
            chloroplastic [Vitis vinifera]
            gi|297733984|emb|CBI15231.3| unnamed protein product
            [Vitis vinifera]
          Length = 893

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/69 (57%), Positives = 50/69 (72%)
 Frame = -2

Query: 294  LAASKTHGNHELGKRAVGKIMELHPSDAGAYVSVSNIYAEAGDWERVLKIRGSMEEMGVR 115
            LAA K HG+ ELG+ A  +++EL P +AGAYV++SNI A+ G WE V+KIR  ME  GV 
Sbjct: 826  LAACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGV- 884

Query: 114  KKEAGWSYV 88
            KKE GWS V
Sbjct: 885  KKEPGWSSV 893


>ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g74600, chloroplastic; Flags: Precursor
            gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical
            protein; 84160-81473 [Arabidopsis thaliana]
            gi|332197493|gb|AEE35614.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/69 (57%), Positives = 48/69 (69%)
 Frame = -2

Query: 294  LAASKTHGNHELGKRAVGKIMELHPSDAGAYVSVSNIYAEAGDWERVLKIRGSMEEMGVR 115
            LAA K HG  ELGK A  K +EL PSDAGAY+S+SNI AE G+W+ V + R  M+  GV 
Sbjct: 828  LAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGV- 886

Query: 114  KKEAGWSYV 88
            +KE GWS V
Sbjct: 887  QKEPGWSSV 895


>tpg|DAA64067.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 754

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/69 (50%), Positives = 49/69 (71%)
 Frame = -2

Query: 294 LAASKTHGNHELGKRAVGKIMELHPSDAGAYVSVSNIYAEAGDWERVLKIRGSMEEMGVR 115
           L A + HGN ++G+R  G ++E  P+++GAYV +SNIYAE GDW  V ++R  M  MGV 
Sbjct: 634 LGACRIHGNTDVGERVAGVLLETEPTESGAYVLLSNIYAEKGDWGAVARVRRKMRGMGV- 692

Query: 114 KKEAGWSYV 88
           KKE G+S+V
Sbjct: 693 KKEVGFSWV 701


>emb|CBI29241.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/69 (53%), Positives = 49/69 (71%)
 Frame = -2

Query: 294 LAASKTHGNHELGKRAVGKIMELHPSDAGAYVSVSNIYAEAGDWERVLKIRGSMEEMGVR 115
           L A K HGN E+GKR    +MEL P D+G+YV++SNIYA  G+WE V K+R  M+EM VR
Sbjct: 318 LGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVR 377

Query: 114 KKEAGWSYV 88
            K+ G S++
Sbjct: 378 -KDPGCSWI 385


>ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/69 (53%), Positives = 49/69 (71%)
 Frame = -2

Query: 294 LAASKTHGNHELGKRAVGKIMELHPSDAGAYVSVSNIYAEAGDWERVLKIRGSMEEMGVR 115
           L A K HGN E+GKR    +MEL P D+G+YV++SNIYA  G+WE V K+R  M+EM VR
Sbjct: 435 LGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVR 494

Query: 114 KKEAGWSYV 88
            K+ G S++
Sbjct: 495 -KDPGCSWI 502


Top