BLASTX nr result

ID: Scutellaria22_contig00016057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00016057
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281073.1| PREDICTED: histone H3-like centromeric prote...    88   6e-33
dbj|BAH03515.1| centromere specific histone H3 variant [Nicotian...    84   2e-32
dbj|BAH03514.1| centromere specific histone H3 variant [Nicotian...    84   2e-32
dbj|BAL42672.1| centromere specific histone H3 variant [Astragal...    89   2e-30
gb|AFK37617.1| unknown [Lotus japonicus]                               80   6e-30

>ref|XP_002281073.1| PREDICTED: histone H3-like centromeric protein HTR12 [Vitis
           vinifera] gi|297745416|emb|CBI40496.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score = 88.2 bits (217), Expect(2) = 6e-33
 Identities = 43/47 (91%), Positives = 44/47 (93%)
 Frame = -3

Query: 443 ALQEAAEDYLVKLFEGAMLCAIHAKRVTLMKKDFELARRIGGIGQPW 303
           ALQEAAEDYLV LFE AMLCAIHAKRVTLMKKD+ELARRIGG GQPW
Sbjct: 110 ALQEAAEDYLVHLFEDAMLCAIHAKRVTLMKKDWELARRIGGKGQPW 156



 Score = 78.6 bits (192), Expect(2) = 6e-33
 Identities = 39/55 (70%), Positives = 44/55 (80%)
 Frame = -1

Query: 622 KKRRNRPGMVALREIRRFQKTSSLLIPAAPFIRLVREIASLYSPNVHRWQAEALV 458
           K  R RPG VALREIRRFQKT+ LLIPAAPFIR VREI+  ++P + RW AEALV
Sbjct: 55  KPFRYRPGTVALREIRRFQKTTHLLIPAAPFIRTVREISYFFAPEISRWTAEALV 109


>dbj|BAH03515.1| centromere specific histone H3 variant [Nicotiana tabacum]
           gi|218744596|dbj|BAH03516.1| centromere specific histone
           H3 variant [Nicotiana sylvestris]
          Length = 157

 Score = 83.6 bits (205), Expect(2) = 2e-32
 Identities = 41/55 (74%), Positives = 47/55 (85%)
 Frame = -1

Query: 622 KKRRNRPGMVALREIRRFQKTSSLLIPAAPFIRLVREIASLYSPNVHRWQAEALV 458
           KK R RPG VALREIRRFQKT +LLIPAAPFIRLV+EI+  ++P V RWQAEAL+
Sbjct: 56  KKTRYRPGTVALREIRRFQKTWNLLIPAAPFIRLVKEISYFFAPEVTRWQAEALI 110



 Score = 81.6 bits (200), Expect(2) = 2e-32
 Identities = 38/47 (80%), Positives = 43/47 (91%)
 Frame = -3

Query: 443 ALQEAAEDYLVKLFEGAMLCAIHAKRVTLMKKDFELARRIGGIGQPW 303
           ALQEAAED+LV LF+ +MLCAIHAKRVTLMKKDFELARR+GG  +PW
Sbjct: 111 ALQEAAEDFLVHLFDDSMLCAIHAKRVTLMKKDFELARRLGGKARPW 157


>dbj|BAH03514.1| centromere specific histone H3 variant [Nicotiana tabacum]
           gi|218744598|dbj|BAH03517.1| centromere specific histone
           H3 variant [Nicotiana tomentosiformis]
          Length = 156

 Score = 83.6 bits (205), Expect(2) = 2e-32
 Identities = 41/55 (74%), Positives = 46/55 (83%)
 Frame = -1

Query: 622 KKRRNRPGMVALREIRRFQKTSSLLIPAAPFIRLVREIASLYSPNVHRWQAEALV 458
           KK R RPG VALREIRRFQKT  LLIPAAPFIRLV+EI+  ++P V RWQAEAL+
Sbjct: 55  KKTRYRPGTVALREIRRFQKTWDLLIPAAPFIRLVKEISHFFAPEVTRWQAEALI 109



 Score = 81.6 bits (200), Expect(2) = 2e-32
 Identities = 38/47 (80%), Positives = 43/47 (91%)
 Frame = -3

Query: 443 ALQEAAEDYLVKLFEGAMLCAIHAKRVTLMKKDFELARRIGGIGQPW 303
           ALQEAAED+LV LF+ +MLCAIHAKRVTLMKKDFELARR+GG  +PW
Sbjct: 110 ALQEAAEDFLVHLFDDSMLCAIHAKRVTLMKKDFELARRLGGKARPW 156


>dbj|BAL42672.1| centromere specific histone H3 variant [Astragalus sinicus]
          Length = 122

 Score = 89.0 bits (219), Expect(2) = 2e-30
 Identities = 41/47 (87%), Positives = 45/47 (95%)
 Frame = -3

Query: 443 ALQEAAEDYLVKLFEGAMLCAIHAKRVTLMKKDFELARRIGGIGQPW 303
           ALQEAAEDYLVKLFE  MLCAIHA+RVTL+KKDFELARR+GGIG+PW
Sbjct: 76  ALQEAAEDYLVKLFEDGMLCAIHARRVTLLKKDFELARRLGGIGRPW 122



 Score = 69.3 bits (168), Expect(2) = 2e-30
 Identities = 33/55 (60%), Positives = 43/55 (78%)
 Frame = -1

Query: 622 KKRRNRPGMVALREIRRFQKTSSLLIPAAPFIRLVREIASLYSPNVHRWQAEALV 458
           KKRR +PG VALREIR FQK+ +LLIPAAPFIR V++I + +S  V RW  +A++
Sbjct: 21  KKRRYKPGTVALREIRHFQKSVNLLIPAAPFIRCVKQITNNFSTEVSRWTPDAVL 75


>gb|AFK37617.1| unknown [Lotus japonicus]
          Length = 159

 Score = 80.1 bits (196), Expect(2) = 6e-30
 Identities = 38/47 (80%), Positives = 41/47 (87%)
 Frame = -3

Query: 443 ALQEAAEDYLVKLFEGAMLCAIHAKRVTLMKKDFELARRIGGIGQPW 303
           A QEAAEDYLV +FE  MLCAIHAKRVTLMKKD ELARR+ GIG+PW
Sbjct: 113 APQEAAEDYLVTMFEDGMLCAIHAKRVTLMKKDIELARRLRGIGRPW 159



 Score = 76.6 bits (187), Expect(2) = 6e-30
 Identities = 39/55 (70%), Positives = 43/55 (78%)
 Frame = -1

Query: 622 KKRRNRPGMVALREIRRFQKTSSLLIPAAPFIRLVREIASLYSPNVHRWQAEALV 458
           KKRRNRPG VALREIRR+QK+  LLIPAAPF+RLVRE     S  V RW AEA+V
Sbjct: 58  KKRRNRPGTVALREIRRYQKSVDLLIPAAPFLRLVRETTRQLSFEVSRWTAEAVV 112


Top