BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00015797
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD93758.1| RNA polymerase beta chain [Lamium sp. Qiu 95019]        94   1e-17
ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum in...    94   2e-17
ref|YP_007317238.1| RNA polymerase beta'' subunit (chloroplast) ...    93   3e-17
gb|ADD31149.1| RNA polymerase beta'' subunit protein [Antirrhinu...    93   3e-17
gb|ABD93754.1| RNA polymerase beta chain [Camellia japonica]           93   3e-17

>gb|ABD93758.1| RNA polymerase beta chain [Lamium sp. Qiu 95019]
          Length = 866

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/72 (66%), Positives = 58/72 (80%), Gaps = 4/72 (5%)
 Frame = -2

Query: 252 LEVRSIDSISMNLENRIEGWNERIPRILGMPWAFLIAAELTIVQSVSLWLIKIRKIYQTQ 73
           LEVRSIDSISMNLE RIEGWNERI RILGMPWAFLI AELTIVQS    + KI+K+Y++Q
Sbjct: 706 LEVRSIDSISMNLEKRIEGWNERITRILGMPWAFLIGAELTIVQSRISLVNKIQKVYRSQ 765

Query: 72  ----RHKHYKVV 49
                ++H +++
Sbjct: 766 GVHIHNRHIEII 777


>ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum indicum]
            gi|378747302|gb|AEO92696.2| RNA polymerase beta'' subunit
            (chloroplast) [Sesamum indicum]
          Length = 1390

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 47/72 (65%), Positives = 58/72 (80%), Gaps = 4/72 (5%)
 Frame = -2

Query: 252  LEVRSIDSISMNLENRIEGWNERIPRILGMPWAFLIAAELTIVQSVSLWLIKIRKIYQTQ 73
            LEVRSIDSISMNLE R+EGWNERI RILGMPWAFLI AELTIVQS    + KI+K+Y++Q
Sbjct: 1155 LEVRSIDSISMNLEKRVEGWNERITRILGMPWAFLIGAELTIVQSRISLVNKIQKVYRSQ 1214

Query: 72   ----RHKHYKVV 49
                 ++H +++
Sbjct: 1215 GVQIHNRHIEII 1226


>ref|YP_007317238.1| RNA polymerase beta'' subunit (chloroplast) [Camellia sinensis]
            gi|430728262|gb|AGA55586.1| RNA polymerase beta'' subunit
            (chloroplast) [Camellia sinensis]
          Length = 1378

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/72 (63%), Positives = 58/72 (80%), Gaps = 4/72 (5%)
 Frame = -2

Query: 252  LEVRSIDSISMNLENRIEGWNERIPRILGMPWAFLIAAELTIVQSVSLWLIKIRKIYQTQ 73
            LEVRSIDSISMNLENR+EGWNERI RILG+PW FLI AELTIVQS    + KI+K+Y++Q
Sbjct: 1152 LEVRSIDSISMNLENRVEGWNERITRILGIPWVFLIGAELTIVQSRISLVNKIQKVYRSQ 1211

Query: 72   ----RHKHYKVV 49
                 ++H +++
Sbjct: 1212 GVQIHNRHIEII 1223


>gb|ADD31149.1| RNA polymerase beta'' subunit protein [Antirrhinum majus]
          Length = 1361

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/72 (62%), Positives = 59/72 (81%), Gaps = 4/72 (5%)
 Frame = -2

Query: 252  LEVRSIDSISMNLENRIEGWNERIPRILGMPWAFLIAAELTIVQSVSLWLIKIRKIYQTQ 73
            LEVRS+D+ISMNLE R+EGWN RIPRILGMPWAFLI+AELTIVQS    + KI+K+Y++Q
Sbjct: 1141 LEVRSVDAISMNLEKRVEGWNGRIPRILGMPWAFLISAELTIVQSRISLVNKIQKVYRSQ 1200

Query: 72   ----RHKHYKVV 49
                 ++H +++
Sbjct: 1201 GVQIHNRHIEII 1212


>gb|ABD93754.1| RNA polymerase beta chain [Camellia japonica]
          Length = 863

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/72 (63%), Positives = 58/72 (80%), Gaps = 4/72 (5%)
 Frame = -2

Query: 252 LEVRSIDSISMNLENRIEGWNERIPRILGMPWAFLIAAELTIVQSVSLWLIKIRKIYQTQ 73
           LEVRSIDSISMNLENR+EGWNERI RILG+PW FLI AELTIVQS    + KI+K+Y++Q
Sbjct: 703 LEVRSIDSISMNLENRVEGWNERITRILGIPWVFLIGAELTIVQSRISLVNKIQKVYRSQ 762

Query: 72  ----RHKHYKVV 49
                ++H +++
Sbjct: 763 GVQIHNRHIEII 774