BLASTX nr result

ID: Scutellaria22_contig00013723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00013723
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525067.1| PREDICTED: probable ribosome biogenesis prot...   339   8e-91
ref|XP_003531368.1| PREDICTED: probable ribosome biogenesis prot...   337   2e-90
gb|ACU23167.1| unknown [Glycine max]                                  337   2e-90
ref|XP_002276760.2| PREDICTED: probable ribosome biogenesis prot...   336   5e-90
ref|XP_002528990.1| conserved hypothetical protein [Ricinus comm...   336   7e-90

>ref|XP_003525067.1| PREDICTED: probable ribosome biogenesis protein C16orf42 homolog
           [Glycine max]
          Length = 271

 Score =  339 bits (869), Expect = 8e-91
 Identities = 172/274 (62%), Positives = 200/274 (72%), Gaps = 2/274 (0%)
 Frame = +3

Query: 42  MGHNNNQKQRRFKKDNHRHVPAQQLHRDEDGGSLPTDPAANEEEEQRV--PSIQLAMWDF 215
           MG+N  ++ R  +  + RH   Q L  D+   SLP +    EEEE+ +  P I+LAMWDF
Sbjct: 1   MGNNRQRRFRAHRAQSSRHHQQQLLLEDDSQSSLPAENVEGEEEEEELTEPKIKLAMWDF 60

Query: 216 GQCDAKRCTGRKLARFGLLKELRVSSGFGGVVLSPTGTQCVSQEDLELIKRRGLAVVDCS 395
           GQCDAKRCTGRKL+R G+LKELRVS+GFGGVVLSP G QCVS+ED  LI+++GLAVVDCS
Sbjct: 61  GQCDAKRCTGRKLSRLGMLKELRVSNGFGGVVLSPAGNQCVSREDYSLIQKKGLAVVDCS 120

Query: 396 WARLDDVPFTKLRCTAPRLLPWLVAANPVNYGRPSQLSCVEALAAALIICGEEETGNLLL 575
           WARLDDVPF +LRC APRLLPWLVAANPVNYGRP QLSCVEAL+AAL ICGEE+T NLLL
Sbjct: 121 WARLDDVPFMRLRCAAPRLLPWLVAANPVNYGRPCQLSCVEALSAALTICGEEKTANLLL 180

Query: 576 SKFKWGHAFLSLNRELLKAYSKCQTGADMIVVQNEWLSQPSTRTLNDPTERKGEHXXXXX 755
            KFKWGHAF+SLN ELL+AYSKCQ  A++I VQN WLSQ S +    PT+   E      
Sbjct: 181 DKFKWGHAFMSLNGELLRAYSKCQNSAEIISVQNAWLSQES-QIPRAPTD--SEVTTPES 237

Query: 756 XXXXXXXXXXXXXLPPLERNMNHLQLEESDEEGE 857
                        LPPLE+NMNHL +  SDEE E
Sbjct: 238 EDKIQNSSDSEDGLPPLEKNMNHLSIANSDEESE 271


>ref|XP_003531368.1| PREDICTED: probable ribosome biogenesis protein C16orf42 homolog
           [Glycine max]
          Length = 270

 Score =  337 bits (865), Expect = 2e-90
 Identities = 171/273 (62%), Positives = 200/273 (73%), Gaps = 1/273 (0%)
 Frame = +3

Query: 42  MGHNNNQKQRRFKKDNHRHVPAQQLHRDEDGGSLPTDPAANEEEEQRV-PSIQLAMWDFG 218
           MG+N  ++ R  +  + RH   Q L  D+   SLP +    EEEE+   P I+LAMWDFG
Sbjct: 1   MGNNRQRRFRTHRAQSSRHHHQQLLLEDDSQSSLPENGEGEEEEEELTEPKIKLAMWDFG 60

Query: 219 QCDAKRCTGRKLARFGLLKELRVSSGFGGVVLSPTGTQCVSQEDLELIKRRGLAVVDCSW 398
           QCDAK+CTGRKL+R G+LKELRVS+GFGG+VLSP G QCVS+ED  LI+++GLAVVDCSW
Sbjct: 61  QCDAKKCTGRKLSRLGMLKELRVSNGFGGIVLSPAGNQCVSREDYSLIQKKGLAVVDCSW 120

Query: 399 ARLDDVPFTKLRCTAPRLLPWLVAANPVNYGRPSQLSCVEALAAALIICGEEETGNLLLS 578
           ARLDDVPF +LRCTAPRLLPWLVAANPVNYGRP QLSCVEAL+AAL ICGEE+T NLLL 
Sbjct: 121 ARLDDVPFVRLRCTAPRLLPWLVAANPVNYGRPCQLSCVEALSAALTICGEEKTANLLLD 180

Query: 579 KFKWGHAFLSLNRELLKAYSKCQTGADMIVVQNEWLSQPSTRTLNDPTERKGEHXXXXXX 758
           KFKWGHAF+SLN ELL+AYSKCQ  A++I VQN WLSQ S +    PT+   E       
Sbjct: 181 KFKWGHAFMSLNGELLRAYSKCQNSAEIISVQNAWLSQES-QIPRAPTD--SEVTTPESE 237

Query: 759 XXXXXXXXXXXXLPPLERNMNHLQLEESDEEGE 857
                       LPPLE+NMNHL +  SDEE E
Sbjct: 238 DKIQNSSDSEDGLPPLEKNMNHLSIVNSDEESE 270


>gb|ACU23167.1| unknown [Glycine max]
          Length = 270

 Score =  337 bits (865), Expect = 2e-90
 Identities = 171/273 (62%), Positives = 200/273 (73%), Gaps = 1/273 (0%)
 Frame = +3

Query: 42  MGHNNNQKQRRFKKDNHRHVPAQQLHRDEDGGSLPTDPAANEEEEQRV-PSIQLAMWDFG 218
           MG+N  ++ R  +  + RH   Q L  D+   SLP +    EEEE+   P I+LAMWDFG
Sbjct: 1   MGNNGQRRFRTHRAQSSRHHHQQLLLEDDSQSSLPENGEGEEEEEELTEPKIKLAMWDFG 60

Query: 219 QCDAKRCTGRKLARFGLLKELRVSSGFGGVVLSPTGTQCVSQEDLELIKRRGLAVVDCSW 398
           QCDAK+CTGRKL+R G+LKELRVS+GFGG+VLSP G QCVS+ED  LI+++GLAVVDCSW
Sbjct: 61  QCDAKKCTGRKLSRLGMLKELRVSNGFGGIVLSPAGNQCVSREDYSLIQKKGLAVVDCSW 120

Query: 399 ARLDDVPFTKLRCTAPRLLPWLVAANPVNYGRPSQLSCVEALAAALIICGEEETGNLLLS 578
           ARLDDVPF +LRCTAPRLLPWLVAANPVNYGRP QLSCVEAL+AAL ICGEE+T NLLL 
Sbjct: 121 ARLDDVPFVRLRCTAPRLLPWLVAANPVNYGRPCQLSCVEALSAALTICGEEKTANLLLD 180

Query: 579 KFKWGHAFLSLNRELLKAYSKCQTGADMIVVQNEWLSQPSTRTLNDPTERKGEHXXXXXX 758
           KFKWGHAF+SLN ELL+AYSKCQ  A++I VQN WLSQ S +    PT+   E       
Sbjct: 181 KFKWGHAFMSLNGELLRAYSKCQNSAEIISVQNAWLSQES-QIPRAPTD--SEVTTPESE 237

Query: 759 XXXXXXXXXXXXLPPLERNMNHLQLEESDEEGE 857
                       LPPLE+NMNHL +  SDEE E
Sbjct: 238 DKIQNSSDSEDGLPPLEKNMNHLSIVNSDEESE 270


>ref|XP_002276760.2| PREDICTED: probable ribosome biogenesis protein C16orf42 homolog
           [Vitis vinifera]
          Length = 302

 Score =  336 bits (862), Expect = 5e-90
 Identities = 182/285 (63%), Positives = 201/285 (70%), Gaps = 15/285 (5%)
 Frame = +3

Query: 42  MGHNNNQKQRRFK-KDNHRHVPAQQLHRDEDGGSLPTDPAAN---------EEEEQRVPS 191
           MGHN   K RRFK   +HR   ++      +  SLPTD  A          EEEE  VP 
Sbjct: 1   MGHN---KARRFKGHQSHRGQSSRFQEPLREYDSLPTDQVAMGFNFCAVAAEEEELSVPK 57

Query: 192 IQLAMWDFGQCDAKRCTGRKLARFGLLKE----LRVSSGFGGVVLSPTGTQCVSQEDLEL 359
           +QLAMWDFGQCDAKRCTGRKL+RFGLLKE    LRV+SGFGG+ LSP G QCVS+ED  L
Sbjct: 58  VQLAMWDFGQCDAKRCTGRKLSRFGLLKESIRLLRVTSGFGGIALSPVGNQCVSKEDYIL 117

Query: 360 IKRRGLAVVDCSWARLDDVPFTKLRCTAPRLLPWLVAANPVNYGRPSQLSCVEALAAALI 539
           IKR+GLAVVDCSWARL DVPFTKLRC APRLLPWLVAANPVNYGRP +LSCVEAL+AAL 
Sbjct: 118 IKRKGLAVVDCSWARLSDVPFTKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALSAALF 177

Query: 540 ICGEEETGNLLLSKFKWGHAFLSLNRELLKAYSKCQTGADMIVVQNEWLSQPSTRTLND- 716
           ICGEEET NLLL KFKWGHAFLSLNRELLKAYSKC+ GA++I VQN WLSQ   +     
Sbjct: 178 ICGEEETANLLLGKFKWGHAFLSLNRELLKAYSKCENGAEIISVQNAWLSQQRLQVQKAL 237

Query: 717 PTERKGEHXXXXXXXXXXXXXXXXXXLPPLERNMNHLQLEESDEE 851
           P +  G                    LPPLE+N+NHL LEESD E
Sbjct: 238 PDDEAG---VSSQNDDEGSCDDSEDGLPPLEKNLNHLNLEESDSE 279


>ref|XP_002528990.1| conserved hypothetical protein [Ricinus communis]
           gi|223531580|gb|EEF33409.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score =  336 bits (861), Expect = 7e-90
 Identities = 170/270 (62%), Positives = 198/270 (73%)
 Frame = +3

Query: 42  MGHNNNQKQRRFKKDNHRHVPAQQLHRDEDGGSLPTDPAANEEEEQRVPSIQLAMWDFGQ 221
           MGHN  ++ +    +  +      L R+++  SLP+D    EE+    P +QLAMWDFGQ
Sbjct: 1   MGHNKPRRSKSHHSNRGQSSRTNLLEREDE--SLPSDQVP-EEDTNSTPRVQLAMWDFGQ 57

Query: 222 CDAKRCTGRKLARFGLLKELRVSSGFGGVVLSPTGTQCVSQEDLELIKRRGLAVVDCSWA 401
           CDAKRCTGRKL RFGLLKELRV+ GFGG+VLSP G+QCVS++D  LIKR+GLAVVDCSWA
Sbjct: 58  CDAKRCTGRKLGRFGLLKELRVNCGFGGIVLSPVGSQCVSKQDHSLIKRKGLAVVDCSWA 117

Query: 402 RLDDVPFTKLRCTAPRLLPWLVAANPVNYGRPSQLSCVEALAAALIICGEEETGNLLLSK 581
           RL+DVPF KLRC APRLLPWLVAANPVNYGRP +LSCVEAL+AALIICGEEET +LLL+K
Sbjct: 118 RLNDVPFVKLRCAAPRLLPWLVAANPVNYGRPCELSCVEALSAALIICGEEETADLLLNK 177

Query: 582 FKWGHAFLSLNRELLKAYSKCQTGADMIVVQNEWLSQPSTRTLNDPTERKGEHXXXXXXX 761
           FKWGHAFLSLNRELLKAYS+C+  AD+I VQN WLSQ S      P   + E        
Sbjct: 178 FKWGHAFLSLNRELLKAYSECENSADIISVQNGWLSQQSKVPKAVPDSEEAE-----TSK 232

Query: 762 XXXXXXXXXXXLPPLERNMNHLQLEESDEE 851
                      LPPLERNMNHL  E+SDE+
Sbjct: 233 DEGSCSDSEDGLPPLERNMNHLNFEDSDED 262


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