BLASTX nr result

ID: Scutellaria22_contig00012774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00012774
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like...   160   3e-37
ref|XP_002524078.1| ring finger protein, putative [Ricinus commu...   156   5e-36
ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A...   150   3e-34
ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|2...   148   1e-33
emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera]   148   1e-33

>ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like [Vitis vinifera]
          Length = 169

 Score =  160 bits (404), Expect = 3e-37
 Identities = 78/129 (60%), Positives = 92/129 (71%), Gaps = 3/129 (2%)
 Frame = -2

Query: 567 ASYYCTRNT---APVLXXXXXXXXXXPRTEDHAVEIGVDEATLTSYPKVLFSDAKVSYKD 397
           ASY+CTR     A             P  E+  V++G+DEAT+ SYPK+++S+AK+ +KD
Sbjct: 39  ASYFCTRPQQVPAAAYGGGGGLREQQPVVEEFVVDVGLDEATILSYPKMVYSEAKLQHKD 98

Query: 396 STATCCSICLADYKGSDMLRVLPECGHLFHLKCVDPWLRRHPTCPVCRXXXXXXXXXXXL 217
           STA CCSICLADYKGSDMLR+LP+CGHLFHLKCVDPWLR HPTCPVCR           L
Sbjct: 99  STAACCSICLADYKGSDMLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPMPTPLSTPL 158

Query: 216 AEVVPLATR 190
           AEVVPLATR
Sbjct: 159 AEVVPLATR 167


>ref|XP_002524078.1| ring finger protein, putative [Ricinus communis]
           gi|223536646|gb|EEF38288.1| ring finger protein,
           putative [Ricinus communis]
          Length = 172

 Score =  156 bits (394), Expect = 5e-36
 Identities = 76/132 (57%), Positives = 90/132 (68%), Gaps = 6/132 (4%)
 Frame = -2

Query: 567 ASYYCTRN------TAPVLXXXXXXXXXXPRTEDHAVEIGVDEATLTSYPKVLFSDAKVS 406
           ASY+CTRN      +               R +D  VE+G+DEATL +YPK+L+S AK+ 
Sbjct: 39  ASYFCTRNHQQQQQSMQTRRRNRSEEPPDDRLQDIVVEVGIDEATLKNYPKLLYSQAKLH 98

Query: 405 YKDSTATCCSICLADYKGSDMLRVLPECGHLFHLKCVDPWLRRHPTCPVCRXXXXXXXXX 226
             D+TATCCSICLADYK +DMLR+LP+CGHLFHLKCVDPWLR HPTCPVCR         
Sbjct: 99  NTDTTATCCSICLADYKSTDMLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRNSPLPTPLS 158

Query: 225 XXLAEVVPLATR 190
             LAEVVPLA+R
Sbjct: 159 TPLAEVVPLASR 170


>ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis
           sativus]
          Length = 172

 Score =  150 bits (378), Expect = 3e-34
 Identities = 82/163 (50%), Positives = 96/163 (58%), Gaps = 8/163 (4%)
 Frame = -2

Query: 654 FLSSDNXXXXXXXXXXXXXXXXXXXXXXLASYYCTRNTAPVLXXXXXXXXXXPRTEDHAV 475
           FLSS N                      LASYYCTRN    L           R+   AV
Sbjct: 11  FLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNG---LSSSVVQRTPPNRSPPQAV 67

Query: 474 --------EIGVDEATLTSYPKVLFSDAKVSYKDSTATCCSICLADYKGSDMLRVLPECG 319
                   +IG+D+ T+TSYPK+L+S+AK+   DSTA+CCSICLADYK SD+LR+LP+CG
Sbjct: 68  GEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCG 127

Query: 318 HLFHLKCVDPWLRRHPTCPVCRXXXXXXXXXXXLAEVVPLATR 190
           HLFHLKCVDPWLR HPTCPVCR           LAE VPLA+R
Sbjct: 128 HLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASR 170


>ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|222868003|gb|EEF05134.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  148 bits (373), Expect = 1e-33
 Identities = 73/125 (58%), Positives = 84/125 (67%), Gaps = 1/125 (0%)
 Frame = -2

Query: 567 ASYYCTRNT-APVLXXXXXXXXXXPRTEDHAVEIGVDEATLTSYPKVLFSDAKVSYKDST 391
           ASY+C RN    V              +   VEIG+DEATL SYP +L+S+AK+   DST
Sbjct: 30  ASYFCARNQQTSVPSQGRNSADQQLNLQSFVVEIGLDEATLKSYPTLLYSEAKLHKTDST 89

Query: 390 ATCCSICLADYKGSDMLRVLPECGHLFHLKCVDPWLRRHPTCPVCRXXXXXXXXXXXLAE 211
           +TCCSICLADYK +D LR+LP+CGHLFHLKCVDPWLR HPTCPVCR           LAE
Sbjct: 90  STCCSICLADYKSTDKLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPLPTPLATPLAE 149

Query: 210 VVPLA 196
           VVPLA
Sbjct: 150 VVPLA 154


>emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera]
          Length = 275

 Score =  148 bits (373), Expect = 1e-33
 Identities = 67/107 (62%), Positives = 81/107 (75%), Gaps = 2/107 (1%)
 Frame = -2

Query: 567 ASYYCTR--NTAPVLXXXXXXXXXXPRTEDHAVEIGVDEATLTSYPKVLFSDAKVSYKDS 394
           ASY+CTR                  P  E+  V++G+DEAT+ SYPK+++S+AK+ +KDS
Sbjct: 39  ASYFCTRPQQVPAAAYGGGGLRLQQPVVEEFVVDVGLDEATILSYPKMVYSEAKLQHKDS 98

Query: 393 TATCCSICLADYKGSDMLRVLPECGHLFHLKCVDPWLRRHPTCPVCR 253
           TA CCSICLADYKGSDMLR+LP+CGHLFHLKCVDPWLR HPTCPVCR
Sbjct: 99  TAACCSICLADYKGSDMLRLLPDCGHLFHLKCVDPWLRLHPTCPVCR 145


Top