BLASTX nr result
ID: Scutellaria22_contig00012553
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria22_contig00012553
(1173 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi... 426 e-117
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,... 409 e-112
ref|XP_002321560.1| predicted protein [Populus trichocarpa] gi|2... 408 e-111
sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-c... 394 e-107
ref|NP_177628.2| pentatricopeptide repeat-containing protein [Ar... 394 e-107
>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 426 bits (1096), Expect = e-117
Identities = 208/317 (65%), Positives = 258/317 (81%), Gaps = 2/317 (0%)
Frame = +3
Query: 228 STTIANLMLKSDNLELLSQTIHALS-DWTPHSVHTVLKNLWNHGPKALQFFKILEDHPSY 404
+T IA L+L+SD L ++H L +TP V VLK LW HGPKALQFFK LE HPSY
Sbjct: 50 ATDIATLVLESDPKSLRG-SLHGLQLQFTPELVDKVLKRLWFHGPKALQFFKHLEYHPSY 108
Query: 405 XXXXXXXXXXXXXXXRMRDYKTTWALVCKMRSRKLGPTPKTFSIITERYVSAGKADKAVK 584
RMRDYKT WALV +MR+R++GP+ KTF+II ER+V+AGK D+A+K
Sbjct: 109 AHSASSFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIK 168
Query: 585 IFLSMHEHGCQQDLNSFNAMLDVLCKSKRVEMAHR-LFKVFRGRFRADVVSYNIIANGFC 761
+FLSM EHGC QDL+SFN +LD+LCKSKRVEMA+ LFKV RG+F+ADVVSYNIIANG+C
Sbjct: 169 VFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWC 228
Query: 762 LRKQTPRALEVMREMVEMGLQPTLTTYNILLSSYFRAGQIREGWEFFLQMKKRKIEIDVV 941
L K+TP+ALEV++EMVE GL PT+TTYNILL YFRAGQ++E WEFFLQMK+R++EIDVV
Sbjct: 229 LIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVV 288
Query: 942 SYTTVIHGFGVAGEVEKSRKVFDEMVGAGVLPSVATYTALIQVLCKKDCVENAIVVFEDM 1121
+YTT++HGFGV GE++++RKVF+EMVG G+LPS ATY A+IQVLCKKD VENA+++FE+M
Sbjct: 289 TYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEM 348
Query: 1122 LGKGYVPNATTYNVLIR 1172
+ KGYVPN TTYNV+IR
Sbjct: 349 VKKGYVPNLTTYNVVIR 365
Score = 111 bits (277), Expect = 4e-22
Identities = 68/228 (29%), Positives = 116/228 (50%), Gaps = 4/228 (1%)
Frame = +3
Query: 489 KMRSRKLGPTPKTFSIITERYVSAGKADKAVKIFLSMHEHGCQQDLNSFNAMLDVLCKSK 668
+M R L PT T++I+ + Y AG+ +A + FL M E + D+ ++ M+
Sbjct: 242 EMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVG 301
Query: 669 RVEMAHRLFKVFRGR-FRADVVSYNIIANGFCLRKQTPRALEVMREMVEMGLQPTLTTYN 845
++ A ++F G +YN + C + A+ + EMV+ G P LTTYN
Sbjct: 302 EIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYN 361
Query: 846 ILLSSYFRAGQIREGWEFFLQMKKRKIEIDVVSYTTVIHGFGVAGEVEKSRKVFDEMVGA 1025
+++ F AG + + EF +MK E +V +Y I F AG+VEK +F++M G
Sbjct: 362 VVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKM-GQ 420
Query: 1026 GVLPSVATYTALIQVLCKKDCVENAIV---VFEDMLGKGYVPNATTYN 1160
G LP++ TY LI + + E+ +V + +M+ +G++P T+N
Sbjct: 421 GSLPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFN 468
>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 482
Score = 409 bits (1052), Expect = e-112
Identities = 193/316 (61%), Positives = 251/316 (79%), Gaps = 1/316 (0%)
Frame = +3
Query: 228 STTIANLMLKSDNLELLSQTIHALS-DWTPHSVHTVLKNLWNHGPKALQFFKILEDHPSY 404
+TT+A L+L S N + L++++H+ S WTP V+T+LK LWNHGPKAL FFKIL HPSY
Sbjct: 29 ATTLAALILNSTNSQTLAESLHSPSIQWTPQLVNTILKRLWNHGPKALHFFKILSHHPSY 88
Query: 405 XXXXXXXXXXXXXXXRMRDYKTTWALVCKMRSRKLGPTPKTFSIITERYVSAGKADKAVK 584
R+RD++T W LV +MRS +LGP+P+TF+II ERY + GK +AV
Sbjct: 89 CHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVT 148
Query: 585 IFLSMHEHGCQQDLNSFNAMLDVLCKSKRVEMAHRLFKVFRGRFRADVVSYNIIANGFCL 764
+F+SMHE+GC QDL+SFN +LDVLCKSKRVEMA+ LFK +G+F+AD VSYNII NG+CL
Sbjct: 149 VFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFKADCVSYNIIVNGWCL 208
Query: 765 RKQTPRALEVMREMVEMGLQPTLTTYNILLSSYFRAGQIREGWEFFLQMKKRKIEIDVVS 944
K+TP+ALE+++EMVE GL P LTTYNI+L+ YFRAGQ E W FFL+MKKRK +IDVV+
Sbjct: 209 IKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVT 268
Query: 945 YTTVIHGFGVAGEVEKSRKVFDEMVGAGVLPSVATYTALIQVLCKKDCVENAIVVFEDML 1124
YT+VIHG GV GE++++R VF++MV GVLPSVAT+ ALIQ+LCKKD VENAI++FE+M+
Sbjct: 269 YTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMV 328
Query: 1125 GKGYVPNATTYNVLIR 1172
+GYVPN+ TYN++IR
Sbjct: 329 KRGYVPNSITYNLVIR 344
Score = 97.1 bits (240), Expect = 8e-18
Identities = 58/228 (25%), Positives = 112/228 (49%), Gaps = 4/228 (1%)
Frame = +3
Query: 489 KMRSRKLGPTPKTFSIITERYVSAGKADKAVKIFLSMHEHGCQQDLNSFNAMLDVLCKSK 668
+M R L P T++I+ Y AG+ ++A FL M + C D+ ++ +++ L
Sbjct: 221 EMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVG 280
Query: 669 RVEMAHRLF-KVFRGRFRADVVSYNIIANGFCLRKQTPRALEVMREMVEMGLQPTLTTYN 845
++ A +F ++ + V ++N + C + A+ + EMV+ G P TYN
Sbjct: 281 EIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYN 340
Query: 846 ILLSSYFRAGQIREGWEFFLQMKKRKIEIDVVSYTTVIHGFGVAGEVEKSRKVFDEMVGA 1025
+++ G+++ E +M+ E +V +Y +I F AGE+EK +F +M
Sbjct: 341 LVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNG 400
Query: 1026 GVLPSVATYTALIQVLCKKDCVENAIV---VFEDMLGKGYVPNATTYN 1160
LP++ TY LI + + +N +V + +M+ +G++P T+N
Sbjct: 401 DCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFN 448
>ref|XP_002321560.1| predicted protein [Populus trichocarpa] gi|222868556|gb|EEF05687.1|
predicted protein [Populus trichocarpa]
Length = 491
Score = 408 bits (1048), Expect = e-111
Identities = 198/325 (60%), Positives = 250/325 (76%), Gaps = 1/325 (0%)
Frame = +3
Query: 201 PNKASKGIHSTTIANLMLKSDNLELLSQTIHALS-DWTPHSVHTVLKNLWNHGPKALQFF 377
P + + + +A L+L S N + L+QT+H+ + WTP V+T+LK LWN GPKALQFF
Sbjct: 29 PPPPQQPLEAAALATLILTSSNPQALAQTLHSPTIQWTPQLVNTILKRLWNDGPKALQFF 88
Query: 378 KILEDHPSYXXXXXXXXXXXXXXXRMRDYKTTWALVCKMRSRKLGPTPKTFSIITERYVS 557
+L HPSY R+RD + +LV +MRS +LGPTPKTF+II ERY S
Sbjct: 89 NLLSHHPSYSHHPSSYDHAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYAS 148
Query: 558 AGKADKAVKIFLSMHEHGCQQDLNSFNAMLDVLCKSKRVEMAHRLFKVFRGRFRADVVSY 737
AGK +AVK+FLSMH+ GC QDL SFN +LDVLCKSKRVEMA+ LFKVF+G+FRAD VSY
Sbjct: 149 AGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCVSY 208
Query: 738 NIIANGFCLRKQTPRALEVMREMVEMGLQPTLTTYNILLSSYFRAGQIREGWEFFLQMKK 917
N++ NG+CL K+T +ALE+++EMV+ GL P LT+YN +L YFRAGQI E W+FFL+MKK
Sbjct: 209 NVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKK 268
Query: 918 RKIEIDVVSYTTVIHGFGVAGEVEKSRKVFDEMVGAGVLPSVATYTALIQVLCKKDCVEN 1097
R EIDV++YTTVIHGFGVAGE++++RKVFD MV GVLPSVATY A IQVLCKKD V+N
Sbjct: 269 RDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDN 328
Query: 1098 AIVVFEDMLGKGYVPNATTYNVLIR 1172
AIV+FE+M+ KGYVPN+ TYN++IR
Sbjct: 329 AIVIFEEMVVKGYVPNSITYNLVIR 353
Score = 95.5 bits (236), Expect = 2e-17
Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 4/228 (1%)
Frame = +3
Query: 489 KMRSRKLGPTPKTFSIITERYVSAGKADKAVKIFLSMHEHGCQQDLNSFNAMLDVLCKSK 668
+M R L P +++ + + Y AG+ ++A FL M + C+ D+ ++ ++ +
Sbjct: 230 EMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAG 289
Query: 669 RVEMAHRLFKVF-RGRFRADVVSYNIIANGFCLRKQTPRALEVMREMVEMGLQPTLTTYN 845
++ A ++F + V +YN C + A+ + EMV G P TYN
Sbjct: 290 EIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYN 349
Query: 846 ILLSSYFRAGQIREGWEFFLQMKKRKIEIDVVSYTTVIHGFGVAGEVEKSRKVFDEMVGA 1025
+++ G++ EF +MK E +V +Y VI F GE++K+ +F +M
Sbjct: 350 LVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSG 409
Query: 1026 GVLPSVATYTALIQVLCKKDCVENAIV---VFEDMLGKGYVPNATTYN 1160
LP++ TY LI + + ++ +V + +M+ +G+VP T+N
Sbjct: 410 DCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFN 457
>sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial; AltName: Full=Protein ORGANELLE TRANSCRIPT
PROCESSING DEFECT 43; Flags: Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535
DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical
protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 394 bits (1013), Expect = e-107
Identities = 194/321 (60%), Positives = 241/321 (75%), Gaps = 6/321 (1%)
Frame = +3
Query: 228 STTIANLMLKSDNL-----ELLSQTIHALSDWTPHSVHTVLKNLWNHGPKALQFFKILED 392
S IA L+L S N + L T + WTP+ V++VLK LWNHGPKALQFF L++
Sbjct: 25 SAAIAKLILSSPNTTHQDDQFLLST--KTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDN 82
Query: 393 HP-SYXXXXXXXXXXXXXXXRMRDYKTTWALVCKMRSRKLGPTPKTFSIITERYVSAGKA 569
H Y R+ + T W+L+ +MRS ++GP+PKTF+I+ ERY SAGK
Sbjct: 83 HHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKP 142
Query: 570 DKAVKIFLSMHEHGCQQDLNSFNAMLDVLCKSKRVEMAHRLFKVFRGRFRADVVSYNIIA 749
DKAVK+FL+MHEHGC QDL SFN +LDVLCKSKRVE A+ LF+ RGRF D V+YN+I
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVIL 202
Query: 750 NGFCLRKQTPRALEVMREMVEMGLQPTLTTYNILLSSYFRAGQIREGWEFFLQMKKRKIE 929
NG+CL K+TP+ALEV++EMVE G+ P LTTYN +L +FRAGQIR WEFFL+MKKR E
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 930 IDVVSYTTVIHGFGVAGEVEKSRKVFDEMVGAGVLPSVATYTALIQVLCKKDCVENAIVV 1109
IDVV+YTTV+HGFGVAGE++++R VFDEM+ GVLPSVATY A+IQVLCKKD VENA+V+
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 1110 FEDMLGKGYVPNATTYNVLIR 1172
FE+M+ +GY PN TTYNVLIR
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIR 343
Score = 101 bits (252), Expect = 3e-19
Identities = 58/228 (25%), Positives = 113/228 (49%), Gaps = 4/228 (1%)
Frame = +3
Query: 489 KMRSRKLGPTPKTFSIITERYVSAGKADKAVKIFLSMHEHGCQQDLNSFNAMLDVLCKSK 668
+M R + P T++ + + + AG+ A + FL M + C+ D+ ++ ++ +
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279
Query: 669 RVEMAHRLF-KVFRGRFRADVVSYNIIANGFCLRKQTPRALEVMREMVEMGLQPTLTTYN 845
++ A +F ++ R V +YN + C + A+ + EMV G +P +TTYN
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339
Query: 846 ILLSSYFRAGQIREGWEFFLQMKKRKIEIDVVSYTTVIHGFGVAGEVEKSRKVFDEMVGA 1025
+L+ F AG+ G E +M+ E + +Y +I + EVEK+ +F++M
Sbjct: 340 VLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSG 399
Query: 1026 GVLPSVATYTALIQVLCKKDCVENAIV---VFEDMLGKGYVPNATTYN 1160
LP++ TY LI + + E+ +V + +M+ +G++P T+N
Sbjct: 400 DCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFN 447
>ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis
thaliana] gi|332197524|gb|AEE35645.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 394 bits (1013), Expect = e-107
Identities = 194/321 (60%), Positives = 241/321 (75%), Gaps = 6/321 (1%)
Frame = +3
Query: 228 STTIANLMLKSDNL-----ELLSQTIHALSDWTPHSVHTVLKNLWNHGPKALQFFKILED 392
S IA L+L S N + L T + WTP+ V++VLK LWNHGPKALQFF L++
Sbjct: 25 SAAIAKLILSSPNTTHQDDQFLLST--KTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDN 82
Query: 393 HP-SYXXXXXXXXXXXXXXXRMRDYKTTWALVCKMRSRKLGPTPKTFSIITERYVSAGKA 569
H Y R+ + T W+L+ +MRS ++GP+PKTF+I+ ERY SAGK
Sbjct: 83 HHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKP 142
Query: 570 DKAVKIFLSMHEHGCQQDLNSFNAMLDVLCKSKRVEMAHRLFKVFRGRFRADVVSYNIIA 749
DKAVK+FL+MHEHGC QDL SFN +LDVLCKSKRVE A+ LF+ RGRF D V+YN+I
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVIL 202
Query: 750 NGFCLRKQTPRALEVMREMVEMGLQPTLTTYNILLSSYFRAGQIREGWEFFLQMKKRKIE 929
NG+CL K+TP+ALEV++EMVE G+ P LTTYN +L +FRAGQIR WEFFL+MKKR E
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 930 IDVVSYTTVIHGFGVAGEVEKSRKVFDEMVGAGVLPSVATYTALIQVLCKKDCVENAIVV 1109
IDVV+YTTV+HGFGVAGE++++R VFDEM+ GVLPSVATY A+IQVLCKKD VENA+V+
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 1110 FEDMLGKGYVPNATTYNVLIR 1172
FE+M+ +GY PN TTYNVLIR
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIR 343
Score = 93.6 bits (231), Expect = 9e-17
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Frame = +3
Query: 489 KMRSRKLGPTPKTFSIITERYVSAGKADKAVKIFLSMHEHGCQQDLNSFNAMLDVLCKSK 668
+M R + P T++ + + + AG+ A + FL M + C+ D+ ++ ++ +
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAG 279
Query: 669 RVEMAHRLF-KVFRGRFRADVVSYNIIANGFCLRKQTPRALEVMREMVEMGLQPTLTTYN 845
++ A +F ++ R V +YN + C + A+ + EMV G +P +TTYN
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339
Query: 846 ILLSSYFRAGQIREGWEFFLQMKKRKIEIDVVSYTTVIHGFGVAGEVEKSRKVFDEMVGA 1025
+L+ F AG+ G E +M+ E + +Y +I + EVEK+ +F++M
Sbjct: 340 VLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSG 399
Query: 1026 GVLPSVATYTALIQVLCKKDCVENAIVVFEDMLGK 1130
LP++ TY LI + + E+ +V K
Sbjct: 400 DCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAK 434