BLASTX nr result
ID: Scutellaria22_contig00012501
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria22_contig00012501
(1909 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ... 685 0.0
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,... 648 0.0
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,... 647 0.0
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [... 645 0.0
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-... 635 e-180
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|302143685|emb|CBI22546.3| unnamed protein product
[Vitis vinifera]
Length = 518
Score = 685 bits (1768), Expect = 0.0
Identities = 357/519 (68%), Positives = 423/519 (81%), Gaps = 3/519 (0%)
Frame = -2
Query: 1764 MGVVIVSSSAA--RTPLGLNARYLTRVSSLRRPVILSFKKDTVKKIALIAPIESVALPLE 1591
MGVV VSSSA+ RTP GLNA++ + LRRP++L+FK D K IAL+ P E + LP+E
Sbjct: 1 MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60
Query: 1590 ANKENQKRLRXXXXXXXXXXXVLTDEASPSTLDLDYNEAAAKLEYIFKQSPEKAVS-VDE 1414
+K+++KRLR V TDE SP +++LDYNEAAAKLE I+K SP VS ++
Sbjct: 61 TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAED 120
Query: 1413 VKDXXXXXXXXXXXRTVVIEEAEKETAENVVRSERKKDRRLNLEKRIALRMNKEGEFLAS 1234
++ T+ ++AEKE ++NVVR KK +RL+LEKRIAL K+ + +AS
Sbjct: 121 LERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVAS 180
Query: 1233 SQKRRHSGNDEDEKTDRLVRNYSASTDLVSVDWKKMKIPPVLPSSEHTWLFELMQPMKAI 1054
QK+R S N EDE D LVR YSASTDLVS+DWKKMKIPPVLP SEH WLF+LMQPMK +
Sbjct: 181 IQKKRDSKN-EDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGL 239
Query: 1053 IRVKESIQNDLGRELTDNELAEAIKMDVVQLRKQLKVGQAARNKMIKHNLRLVLFVMNKY 874
+ VK+++Q DLGRE TD ELAEA+ M VQ+R+ ++VGQAARNK+IKHNLRLVLFV+NKY
Sbjct: 240 LEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKY 299
Query: 873 FQDFANGTRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAVVRSMTLSSFTKV 694
FQ+FANG +FQDLCQAGVKGLITAIDRFEPKR FRLSTYGLFWIRHA++RSMTLSSFT+V
Sbjct: 300 FQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRV 359
Query: 693 SFGLESVRMEIQKAKLELLFELHRLPTDEEITERVGISLERYNEVMRVSKPILSLHAKHA 514
SFGLESVR+EIQ+AKLELLF+L RLPT+EEI E+VGIS ERY+EVMR SK +LSLHA+HA
Sbjct: 360 SFGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHA 419
Query: 513 VTQEEFINVITDVDGVDGDKRRQPTLLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 334
TQEE+IN ITDV+GV GD+ RQ LLRLALDDVLDSLKPKESLV+RQRYGLDGKGDRTL
Sbjct: 420 TTQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTL 479
Query: 333 GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIF 217
GEIAGNL+ISREMVRKHEVKALMKLKHPARVDYLR+YIF
Sbjct: 480 GEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRQYIF 518
>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 514
Score = 648 bits (1671), Expect = 0.0
Identities = 338/519 (65%), Positives = 408/519 (78%), Gaps = 4/519 (0%)
Frame = -2
Query: 1764 MGVVIVSSSAARTPLGLNARYLTRVSSLRRPVILSFKKDTVKKIALIAPIESVALPLEAN 1585
MGVV VSS+AARTP L ++ S+L+RP I++FK D L++P E V LP+E+N
Sbjct: 1 MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60
Query: 1584 KENQKRLRXXXXXXXXXXXVLTDEASPSTLDLDYNEAAAKLEYIFKQSPEKAVSVDEVKD 1405
+KR VL DEA+P +LDLDYNEAAAKLE IFK SP S E KD
Sbjct: 61 NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120
Query: 1404 XXXXXXXXXXXRTVVIEEAEKETAENVVRSERKKDRRLNLEKRIALRMNKEGEFLASSQK 1225
+++ + +VR++ K+ +RL+L+KRIAL+ KEG+ +A +K
Sbjct: 121 GRSKRGQKRS------KKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRK 174
Query: 1224 RRHSGNDEDE----KTDRLVRNYSASTDLVSVDWKKMKIPPVLPSSEHTWLFELMQPMKA 1057
++ + N+ DE + DRLVR+YSASTDLVS+DWKKMKIPPVLPSSEHT LF+L+QPMKA
Sbjct: 175 QKDTKNEADEIDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKA 234
Query: 1056 IIRVKESIQNDLGRELTDNELAEAIKMDVVQLRKQLKVGQAARNKMIKHNLRLVLFVMNK 877
++ V+E +Q LGRE T+ ELA A M+V+Q+R+QL+VG+AARNK+IKHNLRLVLFV+NK
Sbjct: 235 LVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINK 294
Query: 876 YFQDFANGTRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAVVRSMTLSSFTK 697
YF+DFA+G +FQDLCQAGVKGLITAIDRFEPKRKFRLSTY LFWIRHA++RSMTLSSFT+
Sbjct: 295 YFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTR 354
Query: 696 VSFGLESVRMEIQKAKLELLFELHRLPTDEEITERVGISLERYNEVMRVSKPILSLHAKH 517
VSFGL+SVR+EIQ+AKLELL ELHRLPT+ EIT +VGIS ERY EVMR +KP+ SLH++H
Sbjct: 355 VSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRH 414
Query: 516 AVTQEEFINVITDVDGVDGDKRRQPTLLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 337
+ T EE IN ITDV+G GD RRQP LLRLALDDVLDSLKPKESLVIRQRYGLDGKG+RT
Sbjct: 415 STTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRT 474
Query: 336 LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 475 LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 513
>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 515
Score = 647 bits (1668), Expect = 0.0
Identities = 339/521 (65%), Positives = 409/521 (78%), Gaps = 6/521 (1%)
Frame = -2
Query: 1764 MGVVIVSSSAARTPLGLNARYLTRVSSLRRPVILSFKKDTVKKIALIAPIESVALPLEAN 1585
MGVV VSS+AARTP L ++ S+L+RP I++FK D L++P E V LP+E+N
Sbjct: 1 MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60
Query: 1584 KENQKRLRXXXXXXXXXXXVLTDEASPSTLDLDYNEAAAKLEYIFKQSPEKAVSVDEVKD 1405
+KR VL DEA+P +LDLDYNEAAAKLE IFK SP S E KD
Sbjct: 61 NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120
Query: 1404 XXXXXXXXXXXRTVVIEEAEKETAENVVRSERKKDRRLNLEKRIALR------MNKEGEF 1243
+++ + +VR++ K+ +RL+L+KRIAL+ NKEG+
Sbjct: 121 GRSKRGQKRS------KKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKA 174
Query: 1242 LASSQKRRHSGNDEDEKTDRLVRNYSASTDLVSVDWKKMKIPPVLPSSEHTWLFELMQPM 1063
+ S +K++ + N++DE DRLVR+YSASTDLVS+DWKKMKIPPVLPSSEHT LF+L+QPM
Sbjct: 175 VPSLRKQKETKNEDDE-IDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPM 233
Query: 1062 KAIIRVKESIQNDLGRELTDNELAEAIKMDVVQLRKQLKVGQAARNKMIKHNLRLVLFVM 883
KA++ V+E +Q LGRE T+ ELA A M+V+Q+R+QL+VG+AARNK+IKHNLRLVLFV+
Sbjct: 234 KALVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVI 293
Query: 882 NKYFQDFANGTRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAVVRSMTLSSF 703
NKYF+DFA+G +FQDLCQAGVKGLITAIDRFEPKRKFRLSTY LFWIRHA++RSMTLSSF
Sbjct: 294 NKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSF 353
Query: 702 TKVSFGLESVRMEIQKAKLELLFELHRLPTDEEITERVGISLERYNEVMRVSKPILSLHA 523
T+VSFGL+SVR+EIQ+AKLELL ELHRLPT+ EIT +VGIS ERY EVMR +KP+ SLH+
Sbjct: 354 TRVSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHS 413
Query: 522 KHAVTQEEFINVITDVDGVDGDKRRQPTLLRLALDDVLDSLKPKESLVIRQRYGLDGKGD 343
+H+ T EE IN ITDV+G GD RRQP LLRLALDDVLDSLKPKESLVIRQRYGLDGKG+
Sbjct: 414 RHSTTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGN 473
Query: 342 RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 474 RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 514
>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 501
Score = 645 bits (1664), Expect = 0.0
Identities = 337/515 (65%), Positives = 405/515 (78%)
Frame = -2
Query: 1764 MGVVIVSSSAARTPLGLNARYLTRVSSLRRPVILSFKKDTVKKIALIAPIESVALPLEAN 1585
MGVV SSSAARTPLGL+ ++ T S+++R ++++FK+D I L+ P E LP+E +
Sbjct: 1 MGVVTASSSAARTPLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETS 60
Query: 1584 KENQKRLRXXXXXXXXXXXVLTDEASPSTLDLDYNEAAAKLEYIFKQSPEKAVSVDEVKD 1405
K ++R + E S TL++DYNEAAAKLE I+K SP S ++
Sbjct: 61 KGKKRRGKTNR------------EVSSGTLEVDYNEAAAKLENIYKLSPATDTSDVDING 108
Query: 1404 XXXXXXXXXXXRTVVIEEAEKETAENVVRSERKKDRRLNLEKRIALRMNKEGEFLASSQK 1225
E+AE T+ +VR+ KK +RL+L+KRIAL+ N+E E + +K
Sbjct: 109 LIRKGRQRKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIRK 168
Query: 1224 RRHSGNDEDEKTDRLVRNYSASTDLVSVDWKKMKIPPVLPSSEHTWLFELMQPMKAIIRV 1045
++ S D++EK + LVR YSAST+LVS+DW+KMKIPPVLPS+EH WLF+LMQPMK ++ V
Sbjct: 169 KKDS-KDDNEKIEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPV 227
Query: 1044 KESIQNDLGRELTDNELAEAIKMDVVQLRKQLKVGQAARNKMIKHNLRLVLFVMNKYFQD 865
K +Q +LGR+ TD ELAEA M+V ++RKQL+VG+AARNK+IKHNLRLV+FVMNKYFQD
Sbjct: 228 KADLQKNLGRDPTDGELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQD 287
Query: 864 FANGTRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAVVRSMTLSSFTKVSFG 685
FANG RFQDLCQAGVKGLITAIDRFEP+R+F+LSTY LFWIRHA++RSMTLSSFTKVSFG
Sbjct: 288 FANGPRFQDLCQAGVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFG 347
Query: 684 LESVRMEIQKAKLELLFELHRLPTDEEITERVGISLERYNEVMRVSKPILSLHAKHAVTQ 505
LESVR EIQKAKLELL EL R PT+EEI ERVGIS ERY+EV+R +KP LSLHA+HAVTQ
Sbjct: 348 LESVRTEIQKAKLELLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVTQ 407
Query: 504 EEFINVITDVDGVDGDKRRQPTLLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 325
EEFIN ITD+DG GD RRQP LLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
Sbjct: 408 EEFINGITDIDG--GDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 465
Query: 324 AGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
AGNLNISREMVRK+EVKALMKLKHPARVDYLRRY+
Sbjct: 466 AGNLNISREMVRKYEVKALMKLKHPARVDYLRRYV 500
>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
Length = 512
Score = 635 bits (1639), Expect = e-180
Identities = 329/515 (63%), Positives = 406/515 (78%)
Frame = -2
Query: 1764 MGVVIVSSSAARTPLGLNARYLTRVSSLRRPVILSFKKDTVKKIALIAPIESVALPLEAN 1585
MGV+ VS+SAARTPL LN R ++ +RP+IL+FK + K L++P E + LPLE
Sbjct: 1 MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA 60
Query: 1584 KENQKRLRXXXXXXXXXXXVLTDEASPSTLDLDYNEAAAKLEYIFKQSPEKAVSVDEVKD 1405
K++QKR+ V T E SP TLD+DYNEAAAKLE I+K SP V+D
Sbjct: 61 KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTC--NVED 118
Query: 1404 XXXXXXXXXXXRTVVIEEAEKETAENVVRSERKKDRRLNLEKRIALRMNKEGEFLASSQK 1225
R V EE + +NVVR++ KK +RL+L+KRIAL+ N + E + +QK
Sbjct: 119 IDSKIERVLRRRKKVSEERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQK 178
Query: 1224 RRHSGNDEDEKTDRLVRNYSASTDLVSVDWKKMKIPPVLPSSEHTWLFELMQPMKAIIRV 1045
+R+ N + D L+R+YSASTDLVS+DWKKMKIPPVLPSSEH WLF+LMQPMKA+++
Sbjct: 179 KRNVKN-RVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQA 237
Query: 1044 KESIQNDLGRELTDNELAEAIKMDVVQLRKQLKVGQAARNKMIKHNLRLVLFVMNKYFQD 865
KE ++ ++ +E+T ELA+A M ++Q+RK ++VG+AARNK+IKHNLRLVLFV+NKYFQD
Sbjct: 238 KEDLK-EVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQD 296
Query: 864 FANGTRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAVVRSMTLSSFTKVSFG 685
FA+G RFQDLCQAGVKGLITAIDRFEPKR+ +LSTY LFWIRH++VRS+TLSSFT+V FG
Sbjct: 297 FASGPRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFG 356
Query: 684 LESVRMEIQKAKLELLFELHRLPTDEEITERVGISLERYNEVMRVSKPILSLHAKHAVTQ 505
LE VR++IQ+ KL+L FEL R PT+EE+ ER+GISLERY+EVM+ SKPILSLH++H TQ
Sbjct: 357 LERVRVDIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITTQ 416
Query: 504 EEFINVITDVDGVDGDKRRQPTLLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 325
EE+IN ITDVDGV+GD RRQ +LRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
Sbjct: 417 EEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 476
Query: 324 AGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 220
AGNLNISRE+VRKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 477 AGNLNISREIVRKHEVKALMKLKHPARLDYLRRYV 511