BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00012206
         (3565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...  1448   0.0  
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...  1377   0.0  
ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1339   0.0  
ref|XP_004138117.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1338   0.0  
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]             1331   0.0  

>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score = 1448 bits (3749), Expect = 0.0
 Identities = 713/1107 (64%), Positives = 874/1107 (78%), Gaps = 4/1107 (0%)
 Frame = -3

Query: 3482 VRVTNIPETAIAADLLAFLEANLGKGTVFAVEIFSERQNWKSRGHGRAQFETPETKIKAL 3303
            VRV+NIP+TAIA  L  F E+++GKG+VFA +IFSE +NWKSRGHGR QFET ++K+++L
Sbjct: 11   VRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQFETSQSKLQSL 70

Query: 3302 SLSQRRKLIFKGFYLSITSSFEDIIIRPVEPRNRVGL-VLHAGVMVSGDSMGVLESWDGV 3126
            SLS++ KL+FKG  L +TSSF+DII RP+E   R    +LH G+++  D M VLE+W+ V
Sbjct: 71   SLSEQGKLVFKGHQLILTSSFDDIIARPIELNYRFQKGILHTGILLENDYMEVLETWENV 130

Query: 3125 KLWVMPERRKLELFVNHER-ESYKLEVHFADVLESRRCCVNGXXXXXXXXXXXLQHAPKI 2949
            K  +MPER+ LE +V+H + E Y+LEV F D++E+  C +              +HAPK+
Sbjct: 131  KTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCECSLEDEKTALLLKL---KHAPKL 187

Query: 2948 YRKISGPKIVSRFATDRYHICKEDFDFLWVRTTDFSSMKSIGFLSTLCWKIEEGFSSLDI 2769
            Y+++SGP + S+F++DRYH+C+ED +FLWVRTTDFS+MKSIG  S+ CW+IE+G  S D+
Sbjct: 188  YQRVSGPGVASKFSSDRYHVCEEDCEFLWVRTTDFSAMKSIGCSSSPCWEIEDGLLSSDL 247

Query: 2768 YTSLPCYTKDVMELVLEEGVKFEHASNLVPLVNHSSDFPVDYEVLFQLNSLVHTHKMSIT 2589
             + LP    DVM+LVL+E      AS LVPL +  SD  + YE+LFQLNSL+HTHK+S+ 
Sbjct: 248  LSGLPYCNNDVMDLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQLNSLIHTHKISLG 307

Query: 2588 AVDDNLFQTLSRLNMDVALLILKEMHKLHTTCYDPRSFIEDQSMVTTHIGKTFTEAASKR 2409
            AV  +L + LS+L +D A++IL++MHKL +TC++P  FI+ +  V     K    ++  R
Sbjct: 308  AVKTDLIEVLSKLELDTAMMILQKMHKLQSTCFEPVPFIKTRLHVLGKNSKNQPSSSYSR 367

Query: 2408 LIEQNVMSCHRVLVTPSKIYCLGPELESSNYIVKNFAAYASDFVRVTFVDEDWGRLSAGA 2229
            L+ QN+MS HRVLVTPSK+YCLGPELE+SNYIVKNFA +ASDF+RVTFV+EDWG+LS  A
Sbjct: 368  LVNQNMMSVHRVLVTPSKVYCLGPELETSNYIVKNFALHASDFLRVTFVEEDWGKLSPNA 427

Query: 2228 VSASITKGIFAKPQKTDIYRRILSVLRDGIVIGEKKFEFLAFSASQLRSNSVWMFASNDH 2049
            +S S+ +GIFAKP +T IY RILS+LRDG+VIG K+F FLAFSASQLRSNSVWMFASN+H
Sbjct: 428  ISMSVEQGIFAKPYRTKIYHRILSILRDGLVIGSKRFLFLAFSASQLRSNSVWMFASNEH 487

Query: 2048 VKAEDIRDWMGCFNKIRSISKCAARMGQLFSSSKQTLEVHPRDVDLIPDIEVVRDGVKHC 1869
            VKAEDIR+WMGCFNKIRS+SKCAARMGQLFS+S QT+EV    V+++PDIEV  DGV +C
Sbjct: 488  VKAEDIREWMGCFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEILPDIEVTSDGVSYC 547

Query: 1868 FSDGIGKISYLFAKDIVRKLGLTHIPSAFQIRYGGYKGVIVVDRHSFRKLALRNSMLKFE 1689
            FSDGIGKIS  FA  + +K GL++ PSAFQIRYGGYKGVI VDR+SFRKL+LR SMLKFE
Sbjct: 548  FSDGIGKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFE 607

Query: 1688 STNCMLNITKWSESQPCYLNREIITLLSTLGVEDGVFLAMQEEQLRLLGSMLTNTEAALK 1509
            S N MLNITKWS++ PCYLNREI+ LLSTLGVED VF  + +  L LLG MLT  EAAL 
Sbjct: 608  SKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKVFEDLLDNHLHLLGKMLTTNEAALD 667

Query: 1508 VLESSGGNEMKSIIAKMLLQGYEPRKEPYLLTMLQSHLENQISDLRSRCRIFVPKGRVLV 1329
            VLES GG ++K I+ +ML QGY P  EPYL  MLQSH ENQ+SDLRSRCRIF+ KGRVLV
Sbjct: 668  VLESIGGGDVKKILMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRSRCRIFIHKGRVLV 727

Query: 1328 GCLDETATLEYGQVYARVTMTKYEVDSIANHTYFQRXXXXXXXXXXXXXXXKNPCLHPGD 1149
            GCLDET  L YGQVYAR+TMTK E+ S A  ++FQ+               KNPCLHPGD
Sbjct: 728  GCLDETGILNYGQVYARITMTKAELQS-AQQSFFQKVDETTAVVRGNVVVTKNPCLHPGD 786

Query: 1148 VRVLEAVCDVKLEEENLIDCLVFPQKGERPHPNECSGGDLDGDLYFISWDENLIPPRTVT 969
            VRVLEAV +V LEE+  +DC++FPQKGERPHPNECSGGDLDGDLYFISWDENLIP +TVT
Sbjct: 787  VRVLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFISWDENLIPRQTVT 846

Query: 968  PMDYTGRRPRIMDHEVTLEEIQTFFVDYMISDTLGAISNAHLVLADRDPDKALSSKCLEL 789
            PMDYTGRR RIMDHEVTL+EIQ FFVDYMISDTLGAIS AHLV ADR+PDKAL+ KCL+L
Sbjct: 847  PMDYTGRRTRIMDHEVTLQEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPKCLQL 906

Query: 788  ANLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYISQGALGKLYRATVHFIHQM 609
            A LHSMAVDFAKTGA AEMPR LKPREFPDF+ERW+KPMYIS+G LGKLYRA V+    +
Sbjct: 907  ATLHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLYRAIVN--SSV 964

Query: 608  KPNTDLSNEIS--PDAFDLDLIVDGFESFLKTAEGHKEHYLDKMRTLFNYYGAQSEVEIL 435
            + N+D    +    DA+D  L+ DG+E+F++TA+ HKE YLD+M +L NYYGA+ EVEIL
Sbjct: 965  RSNSDDLGSVRAIQDAYDHALLFDGYEAFIETAKNHKETYLDRMNSLLNYYGAEKEVEIL 1024

Query: 434  TGNLQRKSSYLQWDNRRYGEVRERILVSVKSLMREVKGWFKNSCGENEHQKMASAWYYVT 255
            TGNL++KS YLQ DNRRY E+++RILVS KSL +EVKGWF   C E+EH+K+ASAWY+VT
Sbjct: 1025 TGNLRQKSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEHKKLASAWYHVT 1084

Query: 254  YHPSYTHGSQNCLGFPWAVGDILLEIK 174
            YHPSY  GS NCLGFPW VGDILL+IK
Sbjct: 1085 YHPSYCEGSANCLGFPWVVGDILLDIK 1111


>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
            gi|297733815|emb|CBI15062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1127

 Score = 1377 bits (3565), Expect = 0.0
 Identities = 696/1105 (62%), Positives = 851/1105 (77%), Gaps = 1/1105 (0%)
 Frame = -3

Query: 3482 VRVTNIPETAIAADLLAFLEANLGKGTVFAVEIFSERQNWKSRGHGRAQFETPETKIKAL 3303
            V+V+NIP+TAIA +L +FLE+ LG  T++A+EI +E +NWKSRG GR QFET + K  A 
Sbjct: 9    VKVSNIPKTAIAKELWSFLESKLGPNTIYALEIATEHKNWKSRGFGRVQFETLQAKRAAD 68

Query: 3302 SLSQRRKLIFKGFYLSITSSFEDIIIRPVEPRNRVGL-VLHAGVMVSGDSMGVLESWDGV 3126
             LS +  L+F+G  LSI+++F+DII+RPVEPRN+V   VLH G +V  D M VLESW+GV
Sbjct: 69   LLSLQGDLVFRGSSLSISATFDDIIVRPVEPRNQVDSGVLHVGFLVEDDCMLVLESWEGV 128

Query: 3125 KLWVMPERRKLELFVNHERESYKLEVHFADVLESRRCCVNGXXXXXXXXXXXLQHAPKIY 2946
            K  VMPER ++E +V+ + E YKLEV F DVLES  CC+ G            ++APKI+
Sbjct: 129  KTLVMPERNRVEFWVDKDGERYKLEVPFDDVLESSACCLGGGKVNALLLKL--KYAPKIF 186

Query: 2945 RKISGPKIVSRFATDRYHICKEDFDFLWVRTTDFSSMKSIGFLSTLCWKIEEGFSSLDIY 2766
            +K +GP I S+F+ DRYHI KED +FLW+RTTDFSS+KS+G  ++ CW+I+EGF +LDI+
Sbjct: 187  QKFAGPNIASKFSADRYHISKEDAEFLWLRTTDFSSIKSLGQSTSFCWEIKEGFPALDIF 246

Query: 2765 TSLPCYTKDVMELVLEEGVKFEHASNLVPLVNHSSDFPVDYEVLFQLNSLVHTHKMSITA 2586
             S P Y KD+ EL LE+G  F   S LVPLV   S   + YE+LFQLNSLVH  K+S+ A
Sbjct: 247  ASFPYY-KDLTELTLEQGEGFCSDSGLVPLVKCESGPKLAYEILFQLNSLVHAQKISLAA 305

Query: 2585 VDDNLFQTLSRLNMDVALLILKEMHKLHTTCYDPRSFIEDQSMVTTHIGKTFTEAASKRL 2406
            VD +L + LS L +D A++IL+++HK  +T YDP SFI+ Q+ +     K    ++  RL
Sbjct: 306  VDTDLIEILSNLPVDTAIMILQKLHKRKSTRYDPISFIKAQAHIINMNIKNLPPSSHSRL 365

Query: 2405 IEQNVMSCHRVLVTPSKIYCLGPELESSNYIVKNFAAYASDFVRVTFVDEDWGRLSAGAV 2226
               NVMSCHRVLVTPSKIYCLGPELESSNY+VK++AAYASDFVRV+FV+EDW +L + A+
Sbjct: 366  TNNNVMSCHRVLVTPSKIYCLGPELESSNYVVKHYAAYASDFVRVSFVEEDWSKLPSNAL 425

Query: 2225 SASITKGIFAKPQKTDIYRRILSVLRDGIVIGEKKFEFLAFSASQLRSNSVWMFASNDHV 2046
            S SI K  FA P +T+IY RILS+LR+GIVIG K+F+FLAFSASQLRSNSVWMFASND V
Sbjct: 426  SMSIRKAFFADPFRTEIYHRILSILREGIVIGAKRFQFLAFSASQLRSNSVWMFASNDKV 485

Query: 2045 KAEDIRDWMGCFNKIRSISKCAARMGQLFSSSKQTLEVHPRDVDLIPDIEVVRDGVKHCF 1866
            + +DIR+WMGCF KIRS+SKCAARMGQLFSSS QTL V  +DV++IPDIEV  DG  +CF
Sbjct: 486  RVDDIREWMGCFKKIRSVSKCAARMGQLFSSSVQTLPVPVQDVEVIPDIEVTSDGFGYCF 545

Query: 1865 SDGIGKISYLFAKDIVRKLGLTHIPSAFQIRYGGYKGVIVVDRHSFRKLALRNSMLKFES 1686
            SDGIGKIS  FAK + +K GL   PSAFQIRYGGYKGVI VDR+SFRKL+LR+SMLKFES
Sbjct: 546  SDGIGKISLSFAKQVAQKCGLHQTPSAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLKFES 605

Query: 1685 TNCMLNITKWSESQPCYLNREIITLLSTLGVEDGVFLAMQEEQLRLLGSMLTNTEAALKV 1506
             N MLN+TKWSES PCYLNREI++LLSTLGVED  F A+  EQ+ LL  MLTN +AAL V
Sbjct: 606  QNRMLNVTKWSESTPCYLNREIVSLLSTLGVEDENFEALLNEQMHLLDKMLTNRQAALDV 665

Query: 1505 LESSGGNEMKSIIAKMLLQGYEPRKEPYLLTMLQSHLENQISDLRSRCRIFVPKGRVLVG 1326
            LES GG + K+I+AKMLLQGYEP  EPYL  MLQ++ E+Q+SD+R+RCRIFVPK RVL+G
Sbjct: 666  LESMGGIDNKNILAKMLLQGYEPNVEPYLSMMLQAYRESQLSDIRTRCRIFVPKARVLIG 725

Query: 1325 CLDETATLEYGQVYARVTMTKYEVDSIANHTYFQRXXXXXXXXXXXXXXXKNPCLHPGDV 1146
            CLDET  L YGQVY RVTMTK E     N ++FQ+               KNPCLHPGD+
Sbjct: 726  CLDETGILNYGQVYVRVTMTKAE-HKCRNQSFFQKVDDTTSVVIGKVIVTKNPCLHPGDI 784

Query: 1145 RVLEAVCDVKLEEENLIDCLVFPQKGERPHPNECSGGDLDGDLYFISWDENLIPPRTVTP 966
            RVL+AV +V+LEE+ L+DC++FPQKGERPHPNECSGGDLDGD +FI WDE LIP +T  P
Sbjct: 785  RVLDAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDGDQFFICWDEGLIPSQTEAP 844

Query: 965  MDYTGRRPRIMDHEVTLEEIQTFFVDYMISDTLGAISNAHLVLADRDPDKALSSKCLELA 786
            MDYT RRPRIMDH+VTLEEIQ FFVDYMI+DTLG IS AHLV ADR+P+KA S KCLELA
Sbjct: 845  MDYTSRRPRIMDHDVTLEEIQKFFVDYMINDTLGVISTAHLVHADREPEKARSKKCLELA 904

Query: 785  NLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYISQGALGKLYRATVHFIHQMK 606
             LHSMAVDFAKTGAPAEMPR LKP+EFPDFMER +KPMYIS GALGKLYRAT+      K
Sbjct: 905  TLHSMAVDFAKTGAPAEMPRVLKPKEFPDFMERVDKPMYISNGALGKLYRATIASRVNEK 964

Query: 605  PNTDLSNEISPDAFDLDLIVDGFESFLKTAEGHKEHYLDKMRTLFNYYGAQSEVEILTGN 426
             +   S  I   A+D DL VDGFE+FL+ A+ HKE Y +KM TL N+YGA+SE E+LTGN
Sbjct: 965  SSFVWSGTIPGAAYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYGAESEDEMLTGN 1024

Query: 425  LQRKSSYLQWDNRRYGEVRERILVSVKSLMREVKGWFKNSCGENEHQKMASAWYYVTYHP 246
            L+ K  YLQ DNRR+ E+++RIL+SVKSL +E K W   SC  ++HQKMASAWY+VTYH 
Sbjct: 1025 LRNKLMYLQRDNRRFTEMKDRILISVKSLQKEAKEWLYGSCKPHQHQKMASAWYHVTYHS 1084

Query: 245  SYTHGSQNCLGFPWAVGDILLEIKA 171
            +++  + N L FPW VG++LL IK+
Sbjct: 1085 TFSSQTPNFLSFPWIVGEVLLVIKS 1109


>ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cucumis sativus]
          Length = 1117

 Score = 1339 bits (3465), Expect = 0.0
 Identities = 672/1105 (60%), Positives = 834/1105 (75%), Gaps = 1/1105 (0%)
 Frame = -3

Query: 3482 VRVTNIPETAIAADLLAFLEANLGKGTVFAVEIFSERQNWKSRGHGRAQFETPETKIKAL 3303
            +RV+N+PE+AIA DLL FL + LG  +VFA+EIF+ER+NWKSRG GR QF T E K KA+
Sbjct: 9    LRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKAKAM 68

Query: 3302 SLSQRRKLIFKGFYLSITSSFEDIIIRPVEPRNRV-GLVLHAGVMVSGDSMGVLESWDGV 3126
            SLS +  L+F    L  +   +DI++RPV   NR    VLH G M+  + M VLESW+GV
Sbjct: 69   SLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMSVLESWEGV 128

Query: 3125 KLWVMPERRKLELFVNHERESYKLEVHFADVLESRRCCVNGXXXXXXXXXXXLQHAPKIY 2946
            K W+MPERR++E ++ HE+E YKLEV F ++LE+   C+             L++AP+IY
Sbjct: 129  KAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLG--EEKLNALLLKLKYAPRIY 186

Query: 2945 RKISGPKIVSRFATDRYHICKEDFDFLWVRTTDFSSMKSIGFLSTLCWKIEEGFSSLDIY 2766
            +KISG  + SRF++ RY +C ED+D+LWVRTT+FS M+S+G  ++ CW++EE   + DI+
Sbjct: 187  KKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQASDIF 246

Query: 2765 TSLPCYTKDVMELVLEEGVKFEHASNLVPLVNHSSDFPVDYEVLFQLNSLVHTHKMSITA 2586
            +  P Y +   ++VLE+G +F   S +VPL+       + YEV +QLNSLVH  K+S++A
Sbjct: 247  SCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQKISLSA 306

Query: 2585 VDDNLFQTLSRLNMDVALLILKEMHKLHTTCYDPRSFIEDQSMVTTHIGKTFTEAASKRL 2406
             + +L   L  L++D AL +L+ +H+L   CYDP SF++ Q  V     K+   ++ KRL
Sbjct: 307  ANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPPSSQKRL 366

Query: 2405 IEQNVMSCHRVLVTPSKIYCLGPELESSNYIVKNFAAYASDFVRVTFVDEDWGRLSAGAV 2226
               NVM+C+RVLVTPS+IYCLGPELE+SNY+VKNF++YASDF+RVTFV+EDW +L AGAV
Sbjct: 367  -SNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAGAV 425

Query: 2225 SASITKGIFAKPQKTDIYRRILSVLRDGIVIGEKKFEFLAFSASQLRSNSVWMFASNDHV 2046
            + SI +GI +KP +T+IY RI++VLRDGIVIG K+FEFLAFSASQLRSNSVWMFAS+D++
Sbjct: 426  TTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFASSDNL 485

Query: 2045 KAEDIRDWMGCFNKIRSISKCAARMGQLFSSSKQTLEVHPRDVDLIPDIEVVRDGVKHCF 1866
            KAE+IR WMGCF KIRSISKCAARMGQLFSSS QTL V  RDV++IPDIEV  DG+ +CF
Sbjct: 486  KAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDGIDYCF 545

Query: 1865 SDGIGKISYLFAKDIVRKLGLTHIPSAFQIRYGGYKGVIVVDRHSFRKLALRNSMLKFES 1686
            SDGIGKIS  FA+ +  K G+ HIPSAFQIRYGGYKGVI VDR+SFRKL+LR+SMLKFES
Sbjct: 546  SDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKFES 605

Query: 1685 TNCMLNITKWSESQPCYLNREIITLLSTLGVEDGVFLAMQEEQLRLLGSMLTNTEAALKV 1506
             N MLN+TK  +S PCYLNREI TLLSTLGV+D  F A+Q+EQL LL  MLT+ + AL V
Sbjct: 606  KNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKDVALNV 665

Query: 1505 LESSGGNEMKSIIAKMLLQGYEPRKEPYLLTMLQSHLENQISDLRSRCRIFVPKGRVLVG 1326
            LE+  G +  +I+ +ML  GYEP  EPYL  MLQ+H  N  SDLRSRCRIFVPKGR+L+G
Sbjct: 666  LENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLG 725

Query: 1325 CLDETATLEYGQVYARVTMTKYEVDSIANHTYFQRXXXXXXXXXXXXXXXKNPCLHPGDV 1146
            CLDET  L YGQVYA +T+TK E+ +  N  YF                 KNPCLHPGDV
Sbjct: 726  CLDETGILNYGQVYACITLTKSELQN-RNQNYFHTIDETKSILLGKVVVTKNPCLHPGDV 784

Query: 1145 RVLEAVCDVKLEEENLIDCLVFPQKGERPHPNECSGGDLDGDLYFISWDENLIPPRTVTP 966
            RVLEA+  V+LEE+ L+DCL+FPQKG RPH NECSGGDLDGDLYFISWDENLIPP+T  P
Sbjct: 785  RVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPKTEAP 844

Query: 965  MDYTGRRPRIMDHEVTLEEIQTFFVDYMISDTLGAISNAHLVLADRDPDKALSSKCLELA 786
            MDYTGRRPRIMDH+V LEEIQ FFVDYMI+DTLGAIS AHLV ADR+P KALS+KCLELA
Sbjct: 845  MDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKCLELA 904

Query: 785  NLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYISQGALGKLYRATVHFIHQMK 606
             LHSMAVDFAKTGAPAEMPR LKPREFPDFMER++KPMYIS   LGKLYRA V  I Q +
Sbjct: 905  ALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSIEQER 964

Query: 605  PNTDLSNEISPDAFDLDLIVDGFESFLKTAEGHKEHYLDKMRTLFNYYGAQSEVEILTGN 426
                 S E +   +D DL VDGFE+FL+ AE +KE Y++KM  L NYYGA+ E EIL G+
Sbjct: 965  SRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEILMGD 1024

Query: 425  LQRKSSYLQWDNRRYGEVRERILVSVKSLMREVKGWFKNSCGENEHQKMASAWYYVTYHP 246
            L+ ++SYLQ DNR+YG++++RIL+SVK+L +EVK WF+NSC     + MASAWY+VTYHP
Sbjct: 1025 LRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHVTYHP 1084

Query: 245  SYTHGSQNCLGFPWAVGDILLEIKA 171
            SY       L FPWAV D+LL IKA
Sbjct: 1085 SYFKEDMFYLSFPWAVSDVLLNIKA 1109


>ref|XP_004138117.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cucumis sativus]
            gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
            2 [Cucumis sativus]
          Length = 1117

 Score = 1338 bits (3464), Expect = 0.0
 Identities = 672/1105 (60%), Positives = 833/1105 (75%), Gaps = 1/1105 (0%)
 Frame = -3

Query: 3482 VRVTNIPETAIAADLLAFLEANLGKGTVFAVEIFSERQNWKSRGHGRAQFETPETKIKAL 3303
            +RV+N+PE+AIA DLL FL + LG  +VFA+EIF+ER+NWKSRG GR QF T E K KA+
Sbjct: 9    LRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKAKAM 68

Query: 3302 SLSQRRKLIFKGFYLSITSSFEDIIIRPVEPRNRV-GLVLHAGVMVSGDSMGVLESWDGV 3126
            SLS +  L+F    L  +   +DI++RPV   NR    VLH G M+  + M VLESW+GV
Sbjct: 69   SLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMSVLESWEGV 128

Query: 3125 KLWVMPERRKLELFVNHERESYKLEVHFADVLESRRCCVNGXXXXXXXXXXXLQHAPKIY 2946
            K W+MPERR++E ++ HE+E YKLEV F ++LE+   C+             L++AP+IY
Sbjct: 129  KAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLG--EEKLNALLLKLKYAPRIY 186

Query: 2945 RKISGPKIVSRFATDRYHICKEDFDFLWVRTTDFSSMKSIGFLSTLCWKIEEGFSSLDIY 2766
            +KISG  + SRF++ RY +C ED+D+LWVRTT+FS M+S+G  ++ CW++EE   + DI+
Sbjct: 187  KKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQASDIF 246

Query: 2765 TSLPCYTKDVMELVLEEGVKFEHASNLVPLVNHSSDFPVDYEVLFQLNSLVHTHKMSITA 2586
            +  P Y +   ++VLE+G +F   S +VPL+       + YEV +QLNSLVH  K+S++A
Sbjct: 247  SCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQKISLSA 306

Query: 2585 VDDNLFQTLSRLNMDVALLILKEMHKLHTTCYDPRSFIEDQSMVTTHIGKTFTEAASKRL 2406
             + +L   L  L++D AL +L+ +H+L   CYDP SF++ Q  V     K+   ++ KRL
Sbjct: 307  ANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPPSSQKRL 366

Query: 2405 IEQNVMSCHRVLVTPSKIYCLGPELESSNYIVKNFAAYASDFVRVTFVDEDWGRLSAGAV 2226
               NVM+C+RVLVTPS+IYCLGPELE+SNY+VKNF++YASDF+RVTFV+EDW +L AGAV
Sbjct: 367  -SNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAGAV 425

Query: 2225 SASITKGIFAKPQKTDIYRRILSVLRDGIVIGEKKFEFLAFSASQLRSNSVWMFASNDHV 2046
            + SI +GI +KP +T+IY RI++VLRDGIVIG K+FEFLAFSASQLRSNSVWMFAS+D++
Sbjct: 426  TTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFASSDNL 485

Query: 2045 KAEDIRDWMGCFNKIRSISKCAARMGQLFSSSKQTLEVHPRDVDLIPDIEVVRDGVKHCF 1866
            KAE+IR WMGCF KIRSISKCAARMGQLFSSS QTL V  RDV++IPDIEV  DG+ +CF
Sbjct: 486  KAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDGIDYCF 545

Query: 1865 SDGIGKISYLFAKDIVRKLGLTHIPSAFQIRYGGYKGVIVVDRHSFRKLALRNSMLKFES 1686
            SDGIGKIS  FA+ +  K G+ HIPSAFQIRYGGYKGVI VDR+SFRKL+LR+SMLKFES
Sbjct: 546  SDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKFES 605

Query: 1685 TNCMLNITKWSESQPCYLNREIITLLSTLGVEDGVFLAMQEEQLRLLGSMLTNTEAALKV 1506
             N MLN+TK  +S PCYLNREI TLLSTLGV+D  F A+Q+EQL LL  MLT+ + AL V
Sbjct: 606  KNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKDVALNV 665

Query: 1505 LESSGGNEMKSIIAKMLLQGYEPRKEPYLLTMLQSHLENQISDLRSRCRIFVPKGRVLVG 1326
            LE+  G +  +I+ +ML  GYEP  EPYL  MLQ+H  N  SDLRSRCRIFVPKGR+L+G
Sbjct: 666  LENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLG 725

Query: 1325 CLDETATLEYGQVYARVTMTKYEVDSIANHTYFQRXXXXXXXXXXXXXXXKNPCLHPGDV 1146
            CLDET  L YGQVYA +T+TK E+ S  N  YF                 KNPCLHPGDV
Sbjct: 726  CLDETGILNYGQVYACITLTKSELQS-RNQNYFHTIDETKSILLGKVVVTKNPCLHPGDV 784

Query: 1145 RVLEAVCDVKLEEENLIDCLVFPQKGERPHPNECSGGDLDGDLYFISWDENLIPPRTVTP 966
            RVLEA+  V+LEE+ L+DCL+FPQKG RPH NECSGGDLDGDLYFISWDENLIPP+T  P
Sbjct: 785  RVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPKTEAP 844

Query: 965  MDYTGRRPRIMDHEVTLEEIQTFFVDYMISDTLGAISNAHLVLADRDPDKALSSKCLELA 786
            MDYTGRRPRIMDH+V LEEIQ FFVDYMI+DTLGAIS AHLV ADR+P KALS+KCLELA
Sbjct: 845  MDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKCLELA 904

Query: 785  NLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYISQGALGKLYRATVHFIHQMK 606
             LHSMAVDFAKTGAPAEMPR LKPREFPDFMER++KPMYIS   LGKLYRA V  I Q +
Sbjct: 905  ALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSIEQER 964

Query: 605  PNTDLSNEISPDAFDLDLIVDGFESFLKTAEGHKEHYLDKMRTLFNYYGAQSEVEILTGN 426
                 S E +   +D DL VDGFE+FL+ AE +KE Y++KM  L NYYGA+ E EIL G+
Sbjct: 965  SRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEILMGD 1024

Query: 425  LQRKSSYLQWDNRRYGEVRERILVSVKSLMREVKGWFKNSCGENEHQKMASAWYYVTYHP 246
            L+ ++SYLQ DNR+YG++++RIL+SVK+L +EVK WF+NSC     + MASAWY+VTYHP
Sbjct: 1025 LRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHVTYHP 1084

Query: 245  SYTHGSQNCLGFPWAVGDILLEIKA 171
            SY         FPWAV D+LL IKA
Sbjct: 1085 SYFKEDMFYFSFPWAVSDVLLNIKA 1109


>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score = 1331 bits (3445), Expect = 0.0
 Identities = 669/1111 (60%), Positives = 830/1111 (74%), Gaps = 2/1111 (0%)
 Frame = -3

Query: 3482 VRVTNIPETAIAADLLAFLEANLGKGTVFAVEIFSERQNWKSRGHGRAQFETPETKIKAL 3303
            +R+T+IP+TA+A DLL F E+ LG  +VFA+EI ++R NWKSRG GR QF  P+ K  AL
Sbjct: 11   LRLTHIPQTAVAKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAPQAKSDAL 70

Query: 3302 SLSQRRKLIFKGFYLSITSSFEDIIIRPVEPRNRV-GLVLHAGVMVSGDSMGVLESWDGV 3126
             LS+   L+FK   L ++ +++DII RP+   +R+ G VLHAG M S D + VLE W+GV
Sbjct: 71   RLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGGVLHAGFMSSDDCLRVLERWEGV 130

Query: 3125 KLWVMPERRKLELFVNHERESYKLEVHFADVLESRRCCVNGXXXXXXXXXXXLQHAPKIY 2946
            + W+MPERR+LE +V  + E YKL+  F D+ E+  CC +G            ++AP+IY
Sbjct: 131  RGWIMPERRRLEFWVWTDGECYKLDFLFDDIFETVGCCFDGSACNALLLRV--RYAPRIY 188

Query: 2945 RKISGPKIVSRFATDRYHICKEDFDFLWVRTTDFSSMKSIGFLSTLCWKIEEGFSSLDIY 2766
            +K+SGP + S+F+TDRYHICKE FDFLWVRTTDFS +KSIG  ++  W+   GFS  D+ 
Sbjct: 189  QKVSGPNVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWEFNAGFSISDMS 248

Query: 2765 TSLPCYTKDVMELVLEEGVKFEHASNLVPLVNHSSDFPVDYEVLFQLNSLVHTHKMSITA 2586
            T LPCY +D+    LE   +F   S +VPLV   SD  + YE+LFQLN+LVHT K+SI A
Sbjct: 249  TYLPCYREDIQSPSLEARREFSSPSEIVPLVKFPSDSKLAYEILFQLNALVHTQKISIAA 308

Query: 2585 VDDNLFQTLSRLNMDVALLILKEMHKLHTTCYDPRSFIEDQSMVTTHIGKTFTEAASKRL 2406
            VD +L   LS L ++ A++IL+++  L + CY+P SF++  + + T        + S+RL
Sbjct: 309  VDTDLIGILSGLPVETAVMILQKLRLLQSPCYNPVSFVK--AKLPTGKNYRIPLSVSERL 366

Query: 2405 IEQNVMSCHRVLVTPSKIYCLGPELESSNYIVKNFAAYASDFVRVTFVDEDWGRLSAGAV 2226
               NVMSC R L+TP+KIYCLGPELE++NY+VKNF  YASDF+RVTFV+EDW +LSA A+
Sbjct: 367  KNHNVMSCRRALITPTKIYCLGPELETANYVVKNFVEYASDFMRVTFVEEDWSKLSANAI 426

Query: 2225 SASITKGIFAKPQKTDIYRRILSVLRDGIVIGEKKFEFLAFSASQLRSNSVWMFASNDHV 2046
            S  +  G+F++P KT IY RIL VL++GIVIG+K+FEFLAFSASQLRSNSVWMFASND V
Sbjct: 427  STGVHLGVFSRPFKTKIYDRILYVLQNGIVIGDKRFEFLAFSASQLRSNSVWMFASNDEV 486

Query: 2045 KAEDIRDWMGCFNKIRSISKCAARMGQLFSSSKQTLEVHPRDVDLIPDIEVVRDGVKHCF 1866
            KAEDIR+WMGCF KIRSISKCA+RMGQLFSSS  TL V  +DV++I DIEV  DG+ +CF
Sbjct: 487  KAEDIREWMGCFKKIRSISKCASRMGQLFSSSMPTLVVPVQDVEIIDDIEVKTDGINYCF 546

Query: 1865 SDGIGKISYLFAKDIVRKLGLTHIPSAFQIRYGGYKGVIVVDRHSFRKLALRNSMLKFES 1686
            SDGIGKIS  FA+ +  K GL HIPSAFQIRYGGYKGV+ VDR+SF K++LR+SMLKFES
Sbjct: 547  SDGIGKISLPFARQVAEKCGLNHIPSAFQIRYGGYKGVVAVDRNSFWKMSLRDSMLKFES 606

Query: 1685 TNCMLNITKWSESQPCYLNREIITLLSTLGVEDGVFLAMQEEQLRLLGSMLTNTEAALKV 1506
               MLN+TKWSES PC+LNREI+TL STLG++D VF  MQEEQL LLG MLTN EAAL  
Sbjct: 607  KVRMLNVTKWSESMPCFLNREIVTLFSTLGIKDEVFERMQEEQLCLLGKMLTNREAALDT 666

Query: 1505 LESSGGNEMKSIIAKMLLQGYEPRKEPYLLTMLQSHLENQISDLRSRCRIFVPKGRVLVG 1326
            L+S GG   K+I+ +M LQ YEP  +PYL  MLQ+H EN +SDL+SRCRIFVPKGR+L+G
Sbjct: 667  LQSLGGVNSKNILVEM-LQFYEPNVQPYLSMMLQAHYENLLSDLKSRCRIFVPKGRILIG 725

Query: 1325 CLDETATLEYGQVYARVTMTKYEVDSIANHTYFQRXXXXXXXXXXXXXXXKNPCLHPGDV 1146
            CLDET TL YGQVY  + M K E++  A+ +YF++               KNPCLHPGDV
Sbjct: 726  CLDETGTLNYGQVYLCIKMKKAELE-CADQSYFRKVDEETAIVIGKVVVTKNPCLHPGDV 784

Query: 1145 RVLEAVCDVKLEEENLIDCLVFPQKGERPHPNECSGGDLDGDLYFISWDENLIPPRTVTP 966
            RVLEAV + +LEE+ L+DCLVFPQKGERPHPNECSGGDLDGD +FISWD++LIP +T  P
Sbjct: 785  RVLEAVYEPQLEEKGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWDKDLIPCQTEPP 844

Query: 965  MDYTGRRPRIMDHEVTLEEIQTFFVDYMISDTLGAISNAHLVLADRDPDKALSSKCLELA 786
            MDYTGRRPRIMDHEVTLEEIQ FFVDYMI+DTLGAIS AHLV ADR+PDKA S  CL LA
Sbjct: 845  MDYTGRRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPDKACSENCLALA 904

Query: 785  NLHSMAVDFAKTGAPAEMPRALKPREFPDFMERWEKPMYISQGALGKLYRATVHFIHQMK 606
             LHSMAVDFAKTGAPAEMPRALKPREFPDFM+R  KPMY S G LGKLYRAT++   Q +
Sbjct: 905  TLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRATINSTVQTR 964

Query: 605  PNTDLSNEISPDAFDLDLIVDGFESFLKTAEGHKEHYLDKMRTLFNYYGAQSEVEILTGN 426
                 + E++   +D DL V+GFES +  AE HKE Y ++M  L +YY  + E EILTGN
Sbjct: 965  SKFVWTKEMAELVYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEYEDEILTGN 1024

Query: 425  LQRKSSYLQWDNRRYGEVRERILVSVKSLMREVKGWFKNSCGE-NEHQKMASAWYYVTYH 249
            +  K+ +L  DNRRYGE++ERI++SVK L RE K WFK+SC + +EHQK+ASAWYYVTYH
Sbjct: 1025 IYNKAQFLLRDNRRYGEMKERIVLSVKDLQREAKEWFKSSCSKADEHQKLASAWYYVTYH 1084

Query: 248  PSYTHGSQNCLGFPWAVGDILLEIKAEKNMM 156
            P+Y     N L FPW VGDILL +K+    +
Sbjct: 1085 PNYFQERMNSLSFPWIVGDILLRVKSRNKFL 1115