BLASTX nr result

ID: Scutellaria22_contig00012064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00012064
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139635.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...    61   1e-07
gb|AAM64697.1| PRT1 [Arabidopsis thaliana]                             61   1e-07
ref|NP_189124.1| E3 ubiquitin-protein ligase PRT1 [Arabidopsis t...    61   1e-07
ref|XP_002883562.1| hypothetical protein ARALYDRAFT_479998 [Arab...    61   1e-07
emb|CBI37313.3| unnamed protein product [Vitis vinifera]               60   2e-07

>ref|XP_004139635.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Cucumis sativus]
          Length = 359

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
 Frame = -2

Query: 302 IDASNFV----LAFTHFPCFAACGHISCFWCVFKAMDTFQESHCPVCRNLY 162
           +DA  F+    L   + P    CGHISCFWCV K M+ F+ESHCP+CR  Y
Sbjct: 10  VDADAFLCCVCLDLLYKPIVLPCGHISCFWCVHKCMNGFRESHCPICRRSY 60


>gb|AAM64697.1| PRT1 [Arabidopsis thaliana]
          Length = 401

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 22/41 (53%), Positives = 31/41 (75%)
 Frame = -2

Query: 281 LAFTHFPCFAACGHISCFWCVFKAMDTFQESHCPVCRNLYM 159
           L   + P   +CGH+SCFWCV K+M+ F+ESHCP+CR+ Y+
Sbjct: 21  LELLYKPIVLSCGHLSCFWCVHKSMNGFRESHCPICRDPYV 61


>ref|NP_189124.1| E3 ubiquitin-protein ligase PRT1 [Arabidopsis thaliana]
           gi|62900696|sp|Q8LBL5.2|PRT1_ARATH RecName: Full=E3
           ubiquitin-protein ligase PRT1; AltName: Full=Proteolysis
           1 protein gi|3319884|emb|CAA11891.1| PRT1 [Arabidopsis
           thaliana] gi|3319886|emb|CAA11892.1| PRT1 [Arabidopsis
           thaliana] gi|11994662|dbj|BAB02890.1| PRT1 protein
           [Arabidopsis thaliana] gi|19424005|gb|AAL87280.1|
           putative PRT1 protein [Arabidopsis thaliana]
           gi|21280981|gb|AAM45125.1| putative PRT1 protein
           [Arabidopsis thaliana] gi|332643427|gb|AEE76948.1| E3
           ubiquitin-protein ligase PRT1 [Arabidopsis thaliana]
          Length = 410

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 22/41 (53%), Positives = 31/41 (75%)
 Frame = -2

Query: 281 LAFTHFPCFAACGHISCFWCVFKAMDTFQESHCPVCRNLYM 159
           L   + P   +CGH+SCFWCV K+M+ F+ESHCP+CR+ Y+
Sbjct: 30  LELLYKPIVLSCGHLSCFWCVHKSMNGFRESHCPICRDPYV 70


>ref|XP_002883562.1| hypothetical protein ARALYDRAFT_479998 [Arabidopsis lyrata subsp.
           lyrata] gi|297329402|gb|EFH59821.1| hypothetical protein
           ARALYDRAFT_479998 [Arabidopsis lyrata subsp. lyrata]
          Length = 417

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 22/41 (53%), Positives = 31/41 (75%)
 Frame = -2

Query: 281 LAFTHFPCFAACGHISCFWCVFKAMDTFQESHCPVCRNLYM 159
           L   + P   +CGH+SCFWCV K+M+ F+ESHCP+CR+ Y+
Sbjct: 30  LELLYKPIVLSCGHLSCFWCVHKSMNGFRESHCPICRDPYV 70


>emb|CBI37313.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 23/34 (67%), Positives = 25/34 (73%)
 Frame = -2

Query: 263 PCFAACGHISCFWCVFKAMDTFQESHCPVCRNLY 162
           P   ACGHISCFWCV  +MD   ESHCP+CRN Y
Sbjct: 15  PIVLACGHISCFWCVHYSMDGAHESHCPICRNPY 48


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