BLASTX nr result

ID: Scutellaria22_contig00012035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00012035
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872026.1| SNF7 family protein [Arabidopsis lyrata subs...    57   2e-06
gb|AAN60307.1| unknown [Arabidopsis thaliana]                          57   2e-06
ref|NP_197686.1| vacuolar protein sorting-associated protein 24-...    57   2e-06
ref|XP_004163684.1| PREDICTED: vacuolar protein sorting-associat...    55   8e-06
ref|XP_004147294.1| PREDICTED: vacuolar protein sorting-associat...    55   8e-06

>ref|XP_002872026.1| SNF7 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317863|gb|EFH48285.1| SNF7 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 229

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 45/106 (42%), Positives = 52/106 (49%), Gaps = 38/106 (35%)
 Frame = -3

Query: 443 NVQKAI*EAVKRNDMVSAKLL-------------------------------LALCDICP 357
           NVQKAI EA KRNDMVSAK L                               +A+     
Sbjct: 45  NVQKAIKEAAKRNDMVSAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVG 104

Query: 356 KVLKS*-------SLSIAPQLAATMLECSKEMTKAGVIEETVNDAV 240
            + KS        +L  APQ+AATM E SKEMTKAGVIEE VN+A+
Sbjct: 105 HLSKSAEVMKLVNNLMKAPQMAATMQEFSKEMTKAGVIEEFVNEAI 150


>gb|AAN60307.1| unknown [Arabidopsis thaliana]
          Length = 225

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 45/106 (42%), Positives = 52/106 (49%), Gaps = 38/106 (35%)
 Frame = -3

Query: 443 NVQKAI*EAVKRNDMVSAKLL-------------------------------LALCDICP 357
           NVQKAI EA KRNDMVSAK L                               +A+     
Sbjct: 41  NVQKAIKEAAKRNDMVSAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVG 100

Query: 356 KVLKS*-------SLSIAPQLAATMLECSKEMTKAGVIEETVNDAV 240
            + KS        +L  APQ+AATM E SKEMTKAGVIEE VN+A+
Sbjct: 101 HLSKSAEVMKLVNNLMKAPQMAATMQEFSKEMTKAGVIEEFVNEAI 146


>ref|NP_197686.1| vacuolar protein sorting-associated protein 24-1 [Arabidopsis
           thaliana] gi|75170194|sp|Q9FFB3.1|VP241_ARATH RecName:
           Full=Vacuolar protein sorting-associated protein 24
           homolog 1; Short=AtVPS24-1; AltName: Full=Charged
           multivesicular body protein 3 homolog 1; AltName:
           Full=ESCRT-III complex subunit VPS24 homolog 1
           gi|10177242|dbj|BAB10616.1| unnamed protein product
           [Arabidopsis thaliana] gi|15451068|gb|AAK96805.1|
           Unknown protein [Arabidopsis thaliana]
           gi|22136128|gb|AAM91142.1| unknown protein [Arabidopsis
           thaliana] gi|332005717|gb|AED93100.1| vacuolar protein
           sorting-associated protein 24-1 [Arabidopsis thaliana]
          Length = 229

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 45/106 (42%), Positives = 52/106 (49%), Gaps = 38/106 (35%)
 Frame = -3

Query: 443 NVQKAI*EAVKRNDMVSAKLL-------------------------------LALCDICP 357
           NVQKAI EA KRNDMVSAK L                               +A+     
Sbjct: 45  NVQKAIKEAAKRNDMVSAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVG 104

Query: 356 KVLKS*-------SLSIAPQLAATMLECSKEMTKAGVIEETVNDAV 240
            + KS        +L  APQ+AATM E SKEMTKAGVIEE VN+A+
Sbjct: 105 HLSKSAEVMKLVNNLMKAPQMAATMQEFSKEMTKAGVIEEFVNEAI 150


>ref|XP_004163684.1| PREDICTED: vacuolar protein sorting-associated protein 24 homolog
           1-like [Cucumis sativus]
          Length = 228

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 44/106 (41%), Positives = 51/106 (48%), Gaps = 38/106 (35%)
 Frame = -3

Query: 443 NVQKAI*EAVKRNDMVSAKLL-------------------------------LALCDICP 357
           NVQKAI +A KRNDMVSAK L                               +A+     
Sbjct: 45  NVQKAIRDAAKRNDMVSAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVG 104

Query: 356 KVLKS*-------SLSIAPQLAATMLECSKEMTKAGVIEETVNDAV 240
            + KS        +L  AP++A TM E SKEMTKAGVIEE VNDAV
Sbjct: 105 HLSKSAEVMKLVNNLMKAPEMAKTMQEFSKEMTKAGVIEEFVNDAV 150


>ref|XP_004147294.1| PREDICTED: vacuolar protein sorting-associated protein 24 homolog
           1-like [Cucumis sativus]
          Length = 228

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 44/106 (41%), Positives = 51/106 (48%), Gaps = 38/106 (35%)
 Frame = -3

Query: 443 NVQKAI*EAVKRNDMVSAKLL-------------------------------LALCDICP 357
           NVQKAI +A KRNDMVSAK L                               +A+     
Sbjct: 45  NVQKAIRDAAKRNDMVSAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVG 104

Query: 356 KVLKS*-------SLSIAPQLAATMLECSKEMTKAGVIEETVNDAV 240
            + KS        +L  AP++A TM E SKEMTKAGVIEE VNDAV
Sbjct: 105 HLSKSAEVMKLVNNLMKAPEMAKTMQEFSKEMTKAGVIEEFVNDAV 150


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