BLASTX nr result
ID: Scutellaria22_contig00011863
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria22_contig00011863
(883 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containi... 379 e-103
ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containi... 367 2e-99
emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera] 355 6e-96
ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containi... 332 5e-89
ref|NP_190543.1| pentatricopeptide repeat-containing protein [Ar... 307 2e-81
>ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49740-like
[Vitis vinifera]
Length = 729
Score = 379 bits (973), Expect = e-103
Identities = 186/283 (65%), Positives = 222/283 (78%)
Frame = +2
Query: 5 NLISWNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVH 184
NLISWN +ISGFL NG QGLEQF EL++ L+PN YTLS+VLSICASIS L HGK++H
Sbjct: 447 NLISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIH 506
Query: 185 AYILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVEKDTVSWNSIISAYAQHGEGK 364
YIL+ G F LGNALI Y+KCG L+WSLR+FN M +D VSWN++ISAYAQHG+GK
Sbjct: 507 GYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGK 566
Query: 365 EAIKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVKVYGIEPEMHHFSC 544
EA+ +F+AMQ S V PD+ATFTAVLSACSH+GLV DG +IF+SMV YG EP H SC
Sbjct: 567 EAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSC 626
Query: 545 IVDLLGRAGYLDIAERLIKDCGLYIDPNVWWTLLSSCVAHGHLELGSVIARFLLERGHDD 724
IVDLLGRAGYL+ AERLI L I ++WWTL S+C AHG+L LG ++A FLLE +D
Sbjct: 627 IVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEIEQND 686
Query: 725 PALYVLLSNLYANAGKWEEAANLRELMKKHRVIKEPGSSWITS 853
PA+YVLLSN+YA AG+WEEAAN R+LM+K RV K+PG SWI S
Sbjct: 687 PAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCSWIGS 729
Score = 88.6 bits (218), Expect = 2e-15
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 2/221 (0%)
Frame = +2
Query: 11 ISWNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVHAY 190
I++N MI G G + L F E+ LRP T V+S C+S + + H +VHA
Sbjct: 253 ITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSS-ARVSH--QVHAQ 309
Query: 191 ILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVEKDTVSWNSIISAYAQHGEGKEA 370
+K G+ + NA + YS CG L+ VF+ + EKD +SWN II YAQ + A
Sbjct: 310 AIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLA 369
Query: 371 IKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVKVYGIEPEMHHFSCIV 550
I F MQ + + PDE T ++L++ +V ++F ++V G+ ++ + +V
Sbjct: 370 ILAFLQMQR-AGIEPDEFTIGSLLASSESLEIV----KMFQALVSKNGLNSKIEVSNALV 424
Query: 551 DLLGRAGYLDIAERLIKDCGLYIDPNV--WWTLLSSCVAHG 667
+ G ++ A ++ + PN+ W T++S + +G
Sbjct: 425 SAFSKHGQIEQAYQVFNNMS---SPNLISWNTIISGFLFNG 462
Score = 80.9 bits (198), Expect = 4e-13
Identities = 71/270 (26%), Positives = 129/270 (47%), Gaps = 2/270 (0%)
Frame = +2
Query: 11 ISWNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVHAY 190
+ WNA+I+G N L F E+ LG+R + YT + VLS+C S+ L G+EVH
Sbjct: 151 VVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLC-SLELLDFGREVHTL 209
Query: 191 ILKFGYFFHILLGNALIAFYSKCGALNWSLRVFN--CMVEKDTVSWNSIISAYAQHGEGK 364
++K G+ + NAL+ Y G + + VF D +++N +I A G +
Sbjct: 210 VIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDE 269
Query: 365 EAIKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVKVYGIEPEMHHFSC 544
EA+ F+ MQ + + P E TF +V+S+CS + + Q+ + +K+ G E +
Sbjct: 270 EALIMFKEMQ-EACLRPTELTFVSVMSSCSSARV---SHQVHAQAIKM-GFEACTPVSNA 324
Query: 545 IVDLLGRAGYLDIAERLIKDCGLYIDPNVWWTLLSSCVAHGHLELGSVIARFLLERGHDD 724
+ + G L A ++ D L + W ++ A G+ +++A ++R +
Sbjct: 325 AMTMYSSCGNLH-AVHMVFD-RLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIE 382
Query: 725 PALYVLLSNLYANAGKWEEAANLRELMKKH 814
P + + +L A++ E + L+ K+
Sbjct: 383 PDEFT-IGSLLASSESLEIVKMFQALVSKN 411
Score = 74.3 bits (181), Expect = 3e-11
Identities = 57/221 (25%), Positives = 104/221 (47%)
Frame = +2
Query: 5 NLISWNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVH 184
+LISWN +I + + F ++ G+ P+ +T+ S+ AS L K
Sbjct: 349 DLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIG---SLLASSESLEIVKMFQ 405
Query: 185 AYILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVEKDTVSWNSIISAYAQHGEGK 364
A + K G I + NAL++ +SK G + + +VFN M + +SWN+IIS + +G
Sbjct: 406 ALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTL 465
Query: 365 EAIKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVKVYGIEPEMHHFSC 544
+ ++ F + S + P+ T + VLS C+ + G QI +++ G+ +
Sbjct: 466 QGLEQFYELL-MSTLKPNAYTLSIVLSICASISALRHGKQIHGYILR-SGVFSVTSLGNA 523
Query: 545 IVDLLGRAGYLDIAERLIKDCGLYIDPNVWWTLLSSCVAHG 667
++ + + G LD + R+ D W ++S+ HG
Sbjct: 524 LITMYAKCGDLDWSLRIFNVMN-GRDIVSWNAMISAYAQHG 563
Score = 73.9 bits (180), Expect = 4e-11
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 3/231 (1%)
Frame = +2
Query: 101 LRPNHYTLSLVLSICASISDLLHGKEVHAYILKFGYFFHILLGNALIAFYSKCGALNWSL 280
L+P+H+TLS L+ CA++ G ++HAY ++ G + +GN L++FY+K L
Sbjct: 49 LKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQ 108
Query: 281 RVFNCMVEKDTVSWNSIISAYAQHGEGKEAIKWFEAMQHSSAVSPDEATFTAVLSACSHS 460
RVFN + D SW +++SA + G+ A F V + A+++ C+ +
Sbjct: 109 RVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPV-----VWNAIITGCAEN 163
Query: 461 GLVADGIQIFSSMVKVYGIEPEMHHFSCIVDLLGRAGYLDIAER---LIKDCGLYIDPNV 631
+ +F M ++ G+ + + F+ ++ L LD L+ G + +V
Sbjct: 164 KHTEIALNLFREMHQL-GVRHDKYTFASVLSLCS-LELLDFGREVHTLVIKTGFLVRASV 221
Query: 632 WWTLLSSCVAHGHLELGSVIARFLLERGHDDPALYVLLSNLYANAGKWEEA 784
LL+ G + + HDD V++ L A+ G+ EEA
Sbjct: 222 INALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGL-ASVGRDEEA 271
>ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49740-like
[Glycine max]
Length = 722
Score = 367 bits (942), Expect = 2e-99
Identities = 174/281 (61%), Positives = 226/281 (80%)
Frame = +2
Query: 5 NLISWNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVH 184
+LISWN++ISGFL+NG P QGLEQFS L+ ++PN Y+LSLVLSIC+S+S + HGK+VH
Sbjct: 440 SLISWNSIISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVH 499
Query: 185 AYILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVEKDTVSWNSIISAYAQHGEGK 364
YIL+ G+ + LGNAL+ Y+KCG+L+ +LRVF+ MVE+DT++WN+IISAYAQHG G+
Sbjct: 500 GYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGE 559
Query: 365 EAIKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVKVYGIEPEMHHFSC 544
EA+ FEAMQ S + PD+ATFT+VLSACSH+GLV DGI+IF +MVKVYG P + HFSC
Sbjct: 560 EAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSC 619
Query: 545 IVDLLGRAGYLDIAERLIKDCGLYIDPNVWWTLLSSCVAHGHLELGSVIARFLLERGHDD 724
IVDLLGR+GYLD AER+IK N+ W+L S+C AHG+L LG +AR +LER H++
Sbjct: 620 IVDLLGRSGYLDEAERVIKSGYFGAHSNICWSLFSACAAHGNLGLGRTVARLILERDHNN 679
Query: 725 PALYVLLSNLYANAGKWEEAANLRELMKKHRVIKEPGSSWI 847
P++YVLLSN+ A AG+WEEAANLRE+M++ IK+PG SWI
Sbjct: 680 PSVYVLLSNICAAAGQWEEAANLREMMREFGTIKQPGCSWI 720
Score = 91.7 bits (226), Expect = 2e-16
Identities = 60/224 (26%), Positives = 116/224 (51%)
Frame = +2
Query: 5 NLISWNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVH 184
+++SWN M+S FL L + + + ++ G+ P+ +T S+ A+ L + +H
Sbjct: 343 DVVSWNIMVSMFLQENLEEEAMLSYLKMRREGIEPDEFTYG---SLLAATDSLQVVEMIH 399
Query: 185 AYILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVEKDTVSWNSIISAYAQHGEGK 364
+ + K G I + NAL++ Y + G + + ++F+ + K +SWNSIIS + +G
Sbjct: 400 SLLCKSG-LVKIEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPL 458
Query: 365 EAIKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVKVYGIEPEMHHFSC 544
+ ++ F A+ S+ V P+ + + VLS CS ++ G Q+ +++ +G E+ +
Sbjct: 459 QGLEQFSALL-STQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILR-HGFSSEVSLGNA 516
Query: 545 IVDLLGRAGYLDIAERLIKDCGLYIDPNVWWTLLSSCVAHGHLE 676
+V + + G LD A R+ D + D W ++S+ HG E
Sbjct: 517 LVTMYAKCGSLDKALRVF-DAMVERDTITWNAIISAYAQHGRGE 559
Score = 77.4 bits (189), Expect = 4e-12
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Frame = +2
Query: 17 WNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVHAYIL 196
WNA+I+G G F ++ +G++ + YT + +LS+C S+ +G+ VH+ ++
Sbjct: 146 WNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFATMLSLC-SLELFDYGRHVHSVVI 204
Query: 197 KFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVE---KDTVSWNSIISAYAQHGEGKE 367
K G+ + N+LI Y KCG + + VF E +D VS+N++I +A ++
Sbjct: 205 KSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNAMIDGFASVERSED 264
Query: 368 AIKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVKV 508
A F MQ P E TF +V+S+CS + G Q S +K+
Sbjct: 265 AFLIFRDMQ-KGCFDPTEVTFVSVMSSCSS---LRAGCQAQSQAIKM 307
Score = 67.4 bits (163), Expect = 4e-09
Identities = 72/301 (23%), Positives = 124/301 (41%), Gaps = 30/301 (9%)
Frame = +2
Query: 11 ISWNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVHAY 190
+S+NAMI GF F ++ P T V+S C+S L G + +
Sbjct: 247 VSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSS---LRAGCQAQSQ 303
Query: 191 ILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVEKDTVSWNSIISAYAQHGEGKEA 370
+K G+ + + NA++ YS G + +F M E+D VSWN ++S + Q +EA
Sbjct: 304 AIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEA 363
Query: 371 IKWFEAMQHSSAVSPDEATFTAVLSACS--------HSGLVADG---IQIFSSMVKVY-- 511
+ + M+ + PDE T+ ++L+A HS L G I++ +++V Y
Sbjct: 364 MLSYLKMRR-EGIEPDEFTYGSLLAATDSLQVVEMIHSLLCKSGLVKIEVLNALVSAYCR 422
Query: 512 --GIEPEMHHF------------SCIVDLLGRAGYLDIAERLIKDCGLYIDPNVW--WTL 643
I+ F S I L L E+ + PN + +
Sbjct: 423 HGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLV 482
Query: 644 LSSCVAHGHLELGSVIARFLLERG-HDDPALYVLLSNLYANAGKWEEAANLRELMKKHRV 820
LS C + + G + ++L G + +L L +YA G ++A + + M +
Sbjct: 483 LSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDT 542
Query: 821 I 823
I
Sbjct: 543 I 543
>emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
Length = 690
Score = 355 bits (912), Expect = 6e-96
Identities = 178/281 (63%), Positives = 216/281 (76%), Gaps = 3/281 (1%)
Frame = +2
Query: 20 NAMISGFLLNGL---PAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVHAY 190
NA++S F +G QGLEQF EL++ L+PN YTLS+VLSICASIS L HGK++H Y
Sbjct: 410 NALVSAFSKHGQIEQAYQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGY 469
Query: 191 ILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVEKDTVSWNSIISAYAQHGEGKEA 370
IL+ G F LGNALI Y+KCG L+WSLR+FN M +D VSWN++ISAYAQHG+GKEA
Sbjct: 470 ILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEA 529
Query: 371 IKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVKVYGIEPEMHHFSCIV 550
+ +F+AMQ S V PD+ATFTAVLSACSH+GLV DG +IF+SMV YG EP H SCIV
Sbjct: 530 VHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIV 589
Query: 551 DLLGRAGYLDIAERLIKDCGLYIDPNVWWTLLSSCVAHGHLELGSVIARFLLERGHDDPA 730
DLLGRAGYL+ AERLI L I ++WWTL S+C AHG+L LG ++A FLLE +DPA
Sbjct: 590 DLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEIEQNDPA 649
Query: 731 LYVLLSNLYANAGKWEEAANLRELMKKHRVIKEPGSSWITS 853
+YVLLSN+YA AG+WEEAAN R+LM+K RV K+PG SWI S
Sbjct: 650 VYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCSWIGS 690
Score = 80.9 bits (198), Expect = 4e-13
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Frame = +2
Query: 11 ISWNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVHAY 190
+ WNA+I+G N L F E+ LG+R + YT + VLS+C S+ L G+EVH
Sbjct: 157 VVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLC-SLELLDFGREVHTL 215
Query: 191 ILKFGYFFHILLGNALIAFYSKCGALNWSLRVFN--CMVEKDTVSWNSIISAYAQHGEGK 364
++K G+ + NAL+ Y G + + VF D +++N +I A G +
Sbjct: 216 VIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDE 275
Query: 365 EAIKWFEAMQHSSAVSPDEATFTAVLSACS--------HSGLVADGIQ----IFSSMVKV 508
EA+ F+ MQ + + P E TF +V+S+CS H+ + G + + ++ + +
Sbjct: 276 EALIMFKEMQ-EACLRPTELTFVSVMSSCSSARVSHQVHAQAIKMGFEACTPVSNAAMTM 334
Query: 509 YGIEPEMHHFSCIVDLLG 562
Y +H + D LG
Sbjct: 335 YSSCGNLHAVHMVFDRLG 352
Score = 73.9 bits (180), Expect = 4e-11
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 3/231 (1%)
Frame = +2
Query: 101 LRPNHYTLSLVLSICASISDLLHGKEVHAYILKFGYFFHILLGNALIAFYSKCGALNWSL 280
L+P+H+TLS L+ CA++ G ++HAY ++ G + +GN L++FY+K L
Sbjct: 55 LKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQ 114
Query: 281 RVFNCMVEKDTVSWNSIISAYAQHGEGKEAIKWFEAMQHSSAVSPDEATFTAVLSACSHS 460
RVFN + D SW +++SA + G+ A F V + A+++ C+ +
Sbjct: 115 RVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPV-----VWNAIITGCAEN 169
Query: 461 GLVADGIQIFSSMVKVYGIEPEMHHFSCIVDLLGRAGYLDIAER---LIKDCGLYIDPNV 631
+ +F M ++ G+ + + F+ ++ L LD L+ G + +V
Sbjct: 170 KHTEIALNLFREMHQL-GVRHDKYTFASVLSLCS-LELLDFGREVHTLVIKTGFLVRASV 227
Query: 632 WWTLLSSCVAHGHLELGSVIARFLLERGHDDPALYVLLSNLYANAGKWEEA 784
LL+ G + + HDD V++ L A+ G+ EEA
Sbjct: 228 INALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGL-ASVGRDEEA 277
>ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49740-like
[Cucumis sativus]
Length = 735
Score = 332 bits (852), Expect = 5e-89
Identities = 160/281 (56%), Positives = 207/281 (73%)
Frame = +2
Query: 5 NLISWNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVH 184
N+ISWN +I GFLLNGLP Q LE FS+L++ L+P+ +TLS+VLSICA+IS L GK++H
Sbjct: 454 NIISWNTVIYGFLLNGLPLQALEHFSKLIMSKLKPSTFTLSIVLSICANISTLDIGKQIH 513
Query: 185 AYILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVEKDTVSWNSIISAYAQHGEGK 364
YIL+ G L N LI YSKCG L WSLR FN M+E+D VSWNSIISAYAQHG+GK
Sbjct: 514 GYILRSGNSSETSLCNGLITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGK 573
Query: 365 EAIKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVKVYGIEPEMHHFSC 544
EA+ F+AMQ ++ PD+ATFT +LSACSH+GLV + QI M+ Y P + SC
Sbjct: 574 EAVDCFKAMQDMPSIMPDQATFTTILSACSHAGLVEEACQILDIMLIDYRAVPSVDQLSC 633
Query: 545 IVDLLGRAGYLDIAERLIKDCGLYIDPNVWWTLLSSCVAHGHLELGSVIARFLLERGHDD 724
IVDL+GR+GY+D AE +I+ +VWW L S+C AH +L LG ++AR LLE+ D+
Sbjct: 634 IVDLIGRSGYIDQAESVIESAQYGEHTHVWWALFSACAAHENLRLGRIVARILLEKERDN 693
Query: 725 PALYVLLSNLYANAGKWEEAANLRELMKKHRVIKEPGSSWI 847
P++YV+LSN+YA+AG WEEAAN+REL+KK +K+PG SWI
Sbjct: 694 PSVYVVLSNIYASAGCWEEAANVRELIKKTGSMKQPGCSWI 734
Score = 89.0 bits (219), Expect = 1e-15
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 12/179 (6%)
Frame = +2
Query: 11 ISWNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVHAY 190
I++N MI G + + L F ++ L P T ++S C+ I ++VH+
Sbjct: 260 ITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSSCSIIQV---AQQVHSQ 316
Query: 191 ILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVEKDTVSWNSIISAYAQHGEGKEA 370
+K G+ L+GN+ I Y+ CG + VF ++EKD +SWN+IIS+Y Q GK A
Sbjct: 317 AIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISWNAIISSYVQGNFGKSA 376
Query: 371 IKWFEAMQHSSAVSPDEATFTAVLSACS--------HSGLVADG----IQIFSSMVKVY 511
+ F MQ + + PDE TF ++L H+ + +G I+I +++V Y
Sbjct: 377 VLAFLQMQR-TGIGPDEFTFGSLLGVSEFIEIVEMVHAYVYKNGLILIIEILNALVSAY 434
Score = 88.6 bits (218), Expect = 2e-15
Identities = 66/271 (24%), Positives = 135/271 (49%), Gaps = 4/271 (1%)
Frame = +2
Query: 5 NLISWNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVH 184
+LISWNA+IS ++ + F ++ G+ P+ +T +L + I + + VH
Sbjct: 356 DLISWNAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIV---EMVH 412
Query: 185 AYILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVEKDTVSWNSIISAYAQHGEGK 364
AY+ K G I + NAL++ Y+KC + SL+VF+ + K+ +SWN++I + +G
Sbjct: 413 AYVYKNGLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPL 472
Query: 365 EAIKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVKVYGIEPEMHHFSC 544
+A++ F + S + P T + VLS C++ + G QI +++ G E +
Sbjct: 473 QALEHFSKL-IMSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILR-SGNSSETSLCNG 530
Query: 545 IVDLLGRAGYLDIAERLIKDCGLYIDPNV--WWTLLSSCVAHGHLELGSVIARFLLERGH 718
++ + + G L + ++ + I+ ++ W +++S+ HG + + + +
Sbjct: 531 LITMYSKCGLLGWS---LRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPS 587
Query: 719 --DDPALYVLLSNLYANAGKWEEAANLRELM 805
D A + + + ++AG EEA + ++M
Sbjct: 588 IMPDQATFTTILSACSHAGLVEEACQILDIM 618
Score = 84.0 bits (206), Expect = 4e-14
Identities = 63/240 (26%), Positives = 119/240 (49%), Gaps = 4/240 (1%)
Frame = +2
Query: 5 NLISWNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICAS-ISDLLHGKEV 181
N+ WNAMI+G +GL + F E+ +G++P++Y+ + +LS+C I DL G++V
Sbjct: 156 NVACWNAMITGSAESGLDWVAMNTFYEMHKMGVKPDNYSFACILSLCTKEIEDL--GRQV 213
Query: 182 HAYILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVE--KDTVSWNSIISAYAQHG 355
H+ ++K GY + NALI Y L + VF +D +++N +I
Sbjct: 214 HSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEVFEGTESEVRDQITYNVMIDGLVCVR 273
Query: 356 EGKEAIKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVKVYGIEPEMHH 535
+EA+ F+ M+ + +SP E TF +++S+CS ++ Q+ S +K+ G E
Sbjct: 274 RNEEALIMFKDMKR-ACLSPTELTFVSIMSSCS---IIQVAQQVHSQAIKL-GFESFTLV 328
Query: 536 FSCIVDLLGRAGYLDIAERLIKDCGLYIDPN-VWWTLLSSCVAHGHLELGSVIARFLLER 712
+ + + G A + + + I+ + + W + S G+ +V+A ++R
Sbjct: 329 GNSTITMYTSCGEFQAANAVFQ---MLIEKDLISWNAIISSYVQGNFGKSAVLAFLQMQR 385
Score = 80.1 bits (196), Expect = 6e-13
Identities = 55/232 (23%), Positives = 112/232 (48%), Gaps = 3/232 (1%)
Frame = +2
Query: 5 NLISWNAMISGFLLNGLPAQGLEQFSELV---LLGLRPNHYTLSLVLSICASISDLLHGK 175
+L+ +N +++ + L+ F+++ ++P+HY LS L++CA+ D+ G
Sbjct: 21 DLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTLAVCANFRDIAFGS 80
Query: 176 EVHAYILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVEKDTVSWNSIISAYAQHG 355
++H Y ++ G F+ + N +++ Y+K R F + + D SW +++SA + G
Sbjct: 81 QLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSWTTLLSACTKMG 140
Query: 356 EGKEAIKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVKVYGIEPEMHH 535
+ A + F+ M + A + A+++ + SGL + F M K+ G++P+ +
Sbjct: 141 HIEYASEMFDIMPKGNV-----ACWNAMITGSAESGLDWVAMNTFYEMHKM-GVKPDNYS 194
Query: 536 FSCIVDLLGRAGYLDIAERLIKDCGLYIDPNVWWTLLSSCVAHGHLELGSVI 691
F+CI L + + I+D G + SS + G+L SV+
Sbjct: 195 FACI---------LSLCTKEIEDLGRQVH--------SSVIKAGYLRKTSVV 229
>ref|NP_190543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183390|sp|Q9M2Y4.1|PP276_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g49740 gi|6723419|emb|CAB66912.1| putative protein
[Arabidopsis thaliana] gi|332645063|gb|AEE78584.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 737
Score = 307 bits (787), Expect = 2e-81
Identities = 154/287 (53%), Positives = 204/287 (71%), Gaps = 6/287 (2%)
Frame = +2
Query: 5 NLISWNAMISGFLLNGLPAQGLEQFSELVLLGLR--PNHYTLSLVLSICASISDLLHGKE 178
NLISWNA+ISGF NG P +GLE+FS L+ +R P+ YTLS +LSIC S S L+ G +
Sbjct: 451 NLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQ 510
Query: 179 VHAYILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVEKDTVSWNSIISAYAQHGE 358
HAY+L+ G F L+GNALI YS+CG + SL VFN M EKD VSWNS+ISAY++HGE
Sbjct: 511 THAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGE 570
Query: 359 GKEAIKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVKVYGIEPEMHHF 538
G+ A+ ++ MQ V PD ATF+AVLSACSH+GLV +G++IF+SMV+ +G+ + HF
Sbjct: 571 GENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHF 630
Query: 539 SCIVDLLGRAGYLDIAERLI----KDCGLYIDPNVWWTLLSSCVAHGHLELGSVIARFLL 706
SC+VDLLGRAG+LD AE L+ K G +D VWW L S+C AHG L+LG ++A+ L+
Sbjct: 631 SCLVDLLGRAGHLDEAESLVKISEKTIGSRVD--VWWALFSACAAHGDLKLGKMVAKLLM 688
Query: 707 ERGHDDPALYVLLSNLYANAGKWEEAANLRELMKKHRVIKEPGSSWI 847
E+ DDP++YV LSN+YA AG W+EA R + +K+ G SW+
Sbjct: 689 EKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Score = 85.5 bits (210), Expect = 1e-14
Identities = 69/278 (24%), Positives = 135/278 (48%), Gaps = 4/278 (1%)
Frame = +2
Query: 5 NLISWNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVH 184
+L++WN MIS + L + + + ++G++P+ +T S+ A+ DL + V
Sbjct: 353 DLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFG---SLLATSLDLDVLEMVQ 409
Query: 185 AYILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVEKDTVSWNSIISAYAQHGEGK 364
A I+KFG I + NALI+ YSK G + + +F + K+ +SWN+IIS + +G
Sbjct: 410 ACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPF 469
Query: 365 EAIKWFEAMQHSSA-VSPDEATFTAVLSACSHSGLVADGIQIFSSMVKVYGIEPEMHHFS 541
E ++ F + S + PD T + +LS C + + G Q + +++ +G E +
Sbjct: 470 EGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR-HGQFKETLIGN 528
Query: 542 CIVDLLGRAGYLDIAERLIKDCGLYIDPNVWWTLLSSCVAHGHLELGSVIARFLLERGH- 718
++++ + G + + + D W +L+S+ HG E + + + G
Sbjct: 529 ALINMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKV 587
Query: 719 -DDPALYVLLSNLYANAGKWEEAANL-RELMKKHRVIK 826
D A + + + ++AG EE + +++ H VI+
Sbjct: 588 IPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIR 625
Score = 83.2 bits (204), Expect = 7e-14
Identities = 75/308 (24%), Positives = 136/308 (44%), Gaps = 37/308 (12%)
Frame = +2
Query: 11 ISWNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVHAY 190
+++N +I G L + L F +++ LRP T V+ C+ + G +VH
Sbjct: 258 VTFNVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGL 313
Query: 191 ILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVEKDTVSWNSIISAYAQHGEGKEA 370
+K GY + L+ NA + YS + +VF + EKD V+WN++IS+Y Q GK A
Sbjct: 314 AIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSA 373
Query: 371 IKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVKVYGIEPEMHHFSCIV 550
+ ++ M H V PDE TF ++L+ + L D +++ + + +G+ ++ + ++
Sbjct: 374 MSVYKRM-HIIGVKPDEFTFGSLLA----TSLDLDVLEMVQACIIKFGLSSKIEISNALI 428
Query: 551 DLLGRAGYLDIAERLIKD-------------CGLY---------------------IDPN 628
+ G ++ A+ L + G Y I P+
Sbjct: 429 SAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPD 488
Query: 629 VWW--TLLSSCVAHGHLELGSVIARFLLERGH-DDPALYVLLSNLYANAGKWEEAANLRE 799
+ TLLS CV+ L LGS ++L G + + L N+Y+ G + + +
Sbjct: 489 AYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFN 548
Query: 800 LMKKHRVI 823
M + V+
Sbjct: 549 QMSEKDVV 556
Score = 81.6 bits (200), Expect = 2e-13
Identities = 55/214 (25%), Positives = 107/214 (50%), Gaps = 4/214 (1%)
Frame = +2
Query: 2 TNLISWNAMISGFLLNGLPAQGLEQFSELV-LLGLRPNHYTLSLVLSICASISDLLHGKE 178
T L++ N ++G +G L+ F+++ LRP+ Y++SL ++ + D + G +
Sbjct: 19 TTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQ 78
Query: 179 VHAYILKFGYFFHILLGNALIAFYSKCGALNWSLRVFNCMVEKDTVSWNSIISAYAQHGE 358
VH Y ++ G H + N L++ Y + G L + F+ + E D SW +++SA + G+
Sbjct: 79 VHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGD 138
Query: 359 GKEAIKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVKVYGIEPEMHHF 538
+ A + F+ M D A + A+++ C SG +++F M K+ G+ + F
Sbjct: 139 IEYAFEVFDKMPERD----DVAIWNAMITGCKESGYHETSVELFREMHKL-GVRHDKFGF 193
Query: 539 SCIVDLLGRAGYLDIAER---LIKDCGLYIDPNV 631
+ I+ + G LD ++ L+ G +I +V
Sbjct: 194 ATILSMCD-YGSLDFGKQVHSLVIKAGFFIASSV 226
Score = 71.6 bits (174), Expect = 2e-10
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 2/165 (1%)
Frame = +2
Query: 17 WNAMISGFLLNGLPAQGLEQFSELVLLGLRPNHYTLSLVLSICASISDLLHGKEVHAYIL 196
WNAMI+G +G +E F E+ LG+R + + + +LS+C L GK+VH+ ++
Sbjct: 158 WNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVI 216
Query: 197 KFGYFFHILLGNALIAFYSKCGALNWSLRVF--NCMVEKDTVSWNSIISAYAQHGEGKEA 370
K G+F + NALI Y C + + VF + +D V++N +I A + E+
Sbjct: 217 KAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGF-KRDES 275
Query: 371 IKWFEAMQHSSAVSPDEATFTAVLSACSHSGLVADGIQIFSSMVK 505
+ F M +S + P + TF +V+ +CS A G Q+ +K
Sbjct: 276 LLVFRKMLEAS-LRPTDLTFVSVMGSCS---CAAMGHQVHGLAIK 316