BLASTX nr result

ID: Scutellaria22_contig00011183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00011183
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71273.1| 60S ribosomal protein L10B [Hevea brasiliensis]         56   7e-06
gb|AFK38655.1| unknown [Lotus japonicus]                               56   7e-06
gb|ACZ74622.1| 60S ribosomal protein L10-like protein [Wolffia a...    55   8e-06
ref|NP_001234751.1| 60S ribosomal protein L10 [Solanum lycopersi...    56   9e-06
ref|XP_003553186.1| PREDICTED: 60S ribosomal protein L10-like [G...    56   9e-06

>gb|ADR71273.1| 60S ribosomal protein L10B [Hevea brasiliensis]
          Length = 220

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 41/103 (39%), Positives = 47/103 (45%), Gaps = 34/103 (33%)
 Frame = +2

Query: 245 SGKDAFHLRVRVC-IPSISFRSIKCWC*ADRLQTGMRDAYG*PQGGLAR----------- 388
           +GKDAFHLRVRV     +    +     ADRLQTGMR A+G PQG  AR           
Sbjct: 80  AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVR 139

Query: 389 ----------------------RQKIIVSRKWGLIKCSLTEMV 451
                                 RQKIIVSRKWG  K + T+ V
Sbjct: 140 CKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTDYV 182


>gb|AFK38655.1| unknown [Lotus japonicus]
          Length = 223

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 41/101 (40%), Positives = 46/101 (45%), Gaps = 34/101 (33%)
 Frame = +2

Query: 245 SGKDAFHLRVRVC-IPSISFRSIKCWC*ADRLQTGMRDAYG*PQGGLAR----------- 388
           +GKDAFHLRVRV     +    +     ADRLQTGMR A+G PQG  AR           
Sbjct: 80  AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVR 139

Query: 389 ----------------------RQKIIVSRKWGLIKCSLTE 445
                                 RQKIIVSRKWG  K S T+
Sbjct: 140 CKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180


>gb|ACZ74622.1| 60S ribosomal protein L10-like protein [Wolffia arrhiza]
          Length = 223

 Score = 55.5 bits (132), Expect(2) = 8e-06
 Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 34/103 (33%)
 Frame = +2

Query: 245 SGKDAFHLRVRVC-IPSISFRSIKCWC*ADRLQTGMRDAYG*PQGGLAR----------- 388
           +GKDAFHLR+RV     +    +     ADRLQTGMR A+G PQG  AR           
Sbjct: 80  AGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLMSVR 139

Query: 389 ----------------------RQKIIVSRKWGLIKCSLTEMV 451
                                 RQKIIVSRKWG  K + T+ +
Sbjct: 140 CKDGNGVHAQEALRGAKFKFPGRQKIIVSRKWGFTKYNRTDYI 182



 Score = 20.4 bits (41), Expect(2) = 8e-06
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1

Query: 445 NGVNAKLLPSR 477
           +GVNAKLL SR
Sbjct: 193 DGVNAKLLGSR 203


>ref|NP_001234751.1| 60S ribosomal protein L10 [Solanum lycopersicum]
           gi|68449756|gb|AAY97865.1| 60S ribosomal protein L10
           [Solanum lycopersicum]
          Length = 220

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 41/101 (40%), Positives = 46/101 (45%), Gaps = 34/101 (33%)
 Frame = +2

Query: 245 SGKDAFHLRVRVC-IPSISFRSIKCWC*ADRLQTGMRDAYG*PQGGLAR----------- 388
           +GKDAFHLRVRV     +    +     ADRLQTGMR A+G PQG  AR           
Sbjct: 80  AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVR 139

Query: 389 ----------------------RQKIIVSRKWGLIKCSLTE 445
                                 RQKIIVSRKWG  K S T+
Sbjct: 140 CKDGNANHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180


>ref|XP_003553186.1| PREDICTED: 60S ribosomal protein L10-like [Glycine max]
          Length = 220

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 41/107 (38%), Positives = 49/107 (45%), Gaps = 34/107 (31%)
 Frame = +2

Query: 245 SGKDAFHLRVRVC-IPSISFRSIKCWC*ADRLQTGMRDAYG*PQGGLAR----------- 388
           +GKDAFHLRVRV     +    +     ADRLQTGMR A+G PQG  AR           
Sbjct: 80  AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVNIGQVLLSVR 139

Query: 389 ----------------------RQKIIVSRKWGLIKCSLTEMVLMPS 463
                                 RQKII+SRKWG  K S +E + + S
Sbjct: 140 CKDANSHHAQEALRRAKFKFPGRQKIILSRKWGFTKFSRSEYLKLKS 186


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