BLASTX nr result

ID: Scutellaria22_contig00011017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00011017
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding prote...    65   6e-09
emb|CAN80689.1| hypothetical protein VITISV_005501 [Vitis vinifera]    65   6e-09
ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding prote...    62   6e-08
gb|AFK41322.1| unknown [Lotus japonicus]                               58   9e-07
ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycin...    57   1e-06

>ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Vitis
           vinifera]
          Length = 413

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/91 (39%), Positives = 49/91 (53%)
 Frame = -3

Query: 298 EIRTMQSPRFPVIGAAPYTPINLCRTPYQGIAPPISIRTXXXXXXXXXXXXXXXXXXXVM 119
           ++R ++  RFP  GA PY PI   RTPY GIAPP++IR                    V+
Sbjct: 279 DVRAVRPQRFPAAGAVPYVPIRQFRTPYHGIAPPVTIRN----AVPVFSAPPSGLPPQVI 334

Query: 118 QPRANQIAPPVRIRQTIPVFSASHGPKANPL 26
           +    +IAPPV +RQ +PVF+A    K +PL
Sbjct: 335 RAPHMRIAPPVCVRQAVPVFAAPPVRKEDPL 365


>emb|CAN80689.1| hypothetical protein VITISV_005501 [Vitis vinifera]
          Length = 403

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/91 (39%), Positives = 49/91 (53%)
 Frame = -3

Query: 298 EIRTMQSPRFPVIGAAPYTPINLCRTPYQGIAPPISIRTXXXXXXXXXXXXXXXXXXXVM 119
           ++R ++  RFP  GA PY PI   RTPY GIAPP++IR                    V+
Sbjct: 269 DVRAVRPQRFPAAGAVPYVPIRQFRTPYHGIAPPVTIRN----AVPVFSAPPSGLPPQVI 324

Query: 118 QPRANQIAPPVRIRQTIPVFSASHGPKANPL 26
           +    +IAPPV +RQ +PVF+A    K +PL
Sbjct: 325 RAPHMRIAPPVCVRQAVPVFAAPPVRKEDPL 355


>ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 411

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/84 (40%), Positives = 46/84 (54%)
 Frame = -3

Query: 292 RTMQSPRFPVIGAAPYTPINLCRTPYQGIAPPISIRTXXXXXXXXXXXXXXXXXXXVMQP 113
           R ++ P+FP  GAAPY PI   R P QG+APP++IRT                   V++ 
Sbjct: 266 RGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVTIRTAIPVFSPPPPPAAAAVSHQVLRA 324

Query: 112 RANQIAPPVRIRQTIPVFSASHGP 41
              ++APPV IRQ +PVF+A   P
Sbjct: 325 PHVRVAPPVTIRQAVPVFAAPPPP 348


>gb|AFK41322.1| unknown [Lotus japonicus]
          Length = 285

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/86 (34%), Positives = 43/86 (50%)
 Frame = -3

Query: 298 EIRTMQSPRFPVIGAAPYTPINLCRTPYQGIAPPISIRTXXXXXXXXXXXXXXXXXXXVM 119
           E R  +  +FP  GAAPY P+   R+P  G+APP+++R                    + 
Sbjct: 96  ESRVFRPLKFPAAGAAPYVPLRQMRSPCHGVAPPVTVRNMVPVFSAPPLPPPPTVHQVIR 155

Query: 118 QPRANQIAPPVRIRQTIPVFSASHGP 41
            P   ++APPV IRQ IPV++A   P
Sbjct: 156 APPV-RVAPPVNIRQAIPVYAAPPVP 180


>ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycine max]
           gi|255644888|gb|ACU22944.1| unknown [Glycine max]
          Length = 401

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
 Frame = -3

Query: 298 EIRTMQSPRFPVIGAAPYTPINLCRTPYQGIAPPISIRTXXXXXXXXXXXXXXXXXXXVM 119
           E R ++ P+FP  GAAPY PI   R P QG+APP++IRT                   V+
Sbjct: 264 ESRGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVTIRT--AIPVFSPPPAAAAVSHQVL 320

Query: 118 QPRANQIAPPVRIRQTIPVFSASHGP--KANPLSTSANSEP 2
           +    ++APPV IRQ +PVF+    P  K  P+    +  P
Sbjct: 321 RAPHVRVAPPVTIRQAVPVFATPPPPIRKDEPVPIPKDEPP 361


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