BLASTX nr result

ID: Scutellaria22_contig00010879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00010879
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...   352   3e-95
ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-...   350   1e-94
gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]                      347   8e-94
ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana] gi...   347   1e-93
ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana] gi...   347   1e-93

>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score =  352 bits (903), Expect = 3e-95
 Identities = 163/215 (75%), Positives = 196/215 (91%)
 Frame = -1

Query: 646 KVYVISKGSLKPAQKNFNHLKNEWEIFLDITSSVDLCPDEDASIPRQQFSFRPISEIENA 467
           KVY+ISKGSLKPAQKNFNHLKNEWEIFL+ +SSV+LCPDED SIP+QQFSFRPISEIEN 
Sbjct: 248 KVYLISKGSLKPAQKNFNHLKNEWEIFLEASSSVELCPDEDGSIPKQQFSFRPISEIENV 307

Query: 466 ESNSILDIIGVVVTVNPSVPILRKNGMETQRRILHLKDQSGRTVELTLWGDFCNREGQQL 287
           E+NSILD+IG+V++VNPSVPILRKNGMETQRRI++LKD SGR++ELT+WG+FCNREG QL
Sbjct: 308 ENNSILDVIGIVISVNPSVPILRKNGMETQRRIVNLKDGSGRSIELTMWGEFCNREGHQL 367

Query: 286 HEIVEAGVFPILAVKAGKVNDFSGKSISTISATQLFINPDFPEANRLRVWFDRGGKDTSS 107
            E++++G FP+LAVK+GKVNDFSGKS+ TISATQLFINPDF EA  LR WFDRGGK+ +S
Sbjct: 368 QEMIDSGSFPVLAVKSGKVNDFSGKSVGTISATQLFINPDFTEACNLREWFDRGGKNAAS 427

Query: 106 HSISKEFIPGARKNDVRKNLAQIKDEGLGRSDKPD 2
            SIS++ +P   +N++RK ++QIKDEGLGRSDKPD
Sbjct: 428 QSISRDIMPAGSRNEIRKTVSQIKDEGLGRSDKPD 462


>ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 637

 Score =  350 bits (899), Expect = 1e-94
 Identities = 170/215 (79%), Positives = 193/215 (89%)
 Frame = -1

Query: 646 KVYVISKGSLKPAQKNFNHLKNEWEIFLDITSSVDLCPDEDASIPRQQFSFRPISEIENA 467
           KVY+ISKGSLKPAQKNFNHLKNEWEI L+ +S V+LCPDED SIPRQQFSFRPIS+IEN 
Sbjct: 261 KVYMISKGSLKPAQKNFNHLKNEWEILLESSSMVELCPDEDGSIPRQQFSFRPISDIENV 320

Query: 466 ESNSILDIIGVVVTVNPSVPILRKNGMETQRRILHLKDQSGRTVELTLWGDFCNREGQQL 287
           ++NSILD+IGVV +VNPSVPILRKNGMETQRRIL LKD SG +VELTLWG+FCNREGQQL
Sbjct: 321 DNNSILDVIGVVTSVNPSVPILRKNGMETQRRILSLKDSSGSSVELTLWGEFCNREGQQL 380

Query: 286 HEIVEAGVFPILAVKAGKVNDFSGKSISTISATQLFINPDFPEANRLRVWFDRGGKDTSS 107
            ++V+AG FPILAVK GKVNDFSGKSI +IS TQLFINPDFPEA+ LR WF+  GKD++S
Sbjct: 381 QDMVDAGFFPILAVKTGKVNDFSGKSIGSISTTQLFINPDFPEAHSLREWFELVGKDSAS 440

Query: 106 HSISKEFIPGARKNDVRKNLAQIKDEGLGRSDKPD 2
            SISK+ IPGA KN+VRK ++QIKDEGLGRSDKPD
Sbjct: 441 LSISKDIIPGALKNEVRKTVSQIKDEGLGRSDKPD 475


>gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]
          Length = 637

 Score =  347 bits (891), Expect = 8e-94
 Identities = 166/215 (77%), Positives = 193/215 (89%)
 Frame = -1

Query: 646 KVYVISKGSLKPAQKNFNHLKNEWEIFLDITSSVDLCPDEDASIPRQQFSFRPISEIENA 467
           KVY+ISKG+LKPAQKNFNHLKNEWEI LD+ S+V+LCPDED S P+QQFSFRPIS+IEN 
Sbjct: 261 KVYLISKGNLKPAQKNFNHLKNEWEIMLDLNSTVELCPDEDGSYPKQQFSFRPISDIENV 320

Query: 466 ESNSILDIIGVVVTVNPSVPILRKNGMETQRRILHLKDQSGRTVELTLWGDFCNREGQQL 287
           ESN+ILD+IGVV +VNPSVPILRKNGMET RRIL+LKD SGR+VELTLWG+FCNREGQ+L
Sbjct: 321 ESNAILDVIGVVTSVNPSVPILRKNGMETLRRILNLKDNSGRSVELTLWGEFCNREGQKL 380

Query: 286 HEIVEAGVFPILAVKAGKVNDFSGKSISTISATQLFINPDFPEANRLRVWFDRGGKDTSS 107
            E+V+AGVFPILAVKAGKVN+FSGKSI +IS TQLFINPDFPEA  LR WFD+ GKD++S
Sbjct: 381 QEMVDAGVFPILAVKAGKVNEFSGKSIGSISTTQLFINPDFPEAQSLRAWFDQVGKDSAS 440

Query: 106 HSISKEFIPGARKNDVRKNLAQIKDEGLGRSDKPD 2
            SISK+   G  KN++RK ++QI+DEGLGRSDKPD
Sbjct: 441 LSISKDITHGGPKNEIRKTVSQIRDEGLGRSDKPD 475


>ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana]
           gi|330250915|gb|AEC06009.1| replication factor A1
           [Arabidopsis thaliana]
          Length = 617

 Score =  347 bits (890), Expect = 1e-93
 Identities = 162/216 (75%), Positives = 199/216 (92%), Gaps = 1/216 (0%)
 Frame = -1

Query: 646 KVYVISKGSLKPAQKNFNHLKNEWEIFLDITSSVDLCPDEDASIPRQQFSFRPISEIENA 467
           KVY+ISKGSLKPAQKNFNHLKNEWEIFL+ TS+V+LCPDED SIP+QQFSFRPIS+IENA
Sbjct: 244 KVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDIENA 303

Query: 466 ESNSILDIIGVVVTVNPSVPILRKNGMETQRRILHLKDQSGRTVELTLWGDFCNREGQQL 287
           E+N+ILD+IGVV +VNPSVPILRKNGMET RRIL+LKD+SG+ VE+TLWG+FCNR+G+QL
Sbjct: 304 ENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESGKAVEVTLWGEFCNRDGRQL 363

Query: 286 HEIVEAGVFPILAVKAGKVNDFSGKSISTISATQLFINPDFPEANRLRVWFDRGGKDTSS 107
            E+V++   P+LA+KAGKV+DFSGKS+ TIS+TQLFINPDFPEA++LR WFD GGKDT+S
Sbjct: 364 EEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTAS 423

Query: 106 HSISKEFIP-GARKNDVRKNLAQIKDEGLGRSDKPD 2
            SIS++ +P G  +N++RKN++QIK+EGLGRSDKPD
Sbjct: 424 FSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDKPD 459


>ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana]
           gi|4584356|gb|AAD25150.1| putative replication protein
           A1 [Arabidopsis thaliana] gi|26452416|dbj|BAC43293.1|
           putative replication protein A1 [Arabidopsis thaliana]
           gi|29029004|gb|AAO64881.1| At2g06510 [Arabidopsis
           thaliana] gi|330250916|gb|AEC06010.1| replication factor
           A1 [Arabidopsis thaliana]
          Length = 640

 Score =  347 bits (890), Expect = 1e-93
 Identities = 162/216 (75%), Positives = 199/216 (92%), Gaps = 1/216 (0%)
 Frame = -1

Query: 646 KVYVISKGSLKPAQKNFNHLKNEWEIFLDITSSVDLCPDEDASIPRQQFSFRPISEIENA 467
           KVY+ISKGSLKPAQKNFNHLKNEWEIFL+ TS+V+LCPDED SIP+QQFSFRPIS+IENA
Sbjct: 267 KVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDIENA 326

Query: 466 ESNSILDIIGVVVTVNPSVPILRKNGMETQRRILHLKDQSGRTVELTLWGDFCNREGQQL 287
           E+N+ILD+IGVV +VNPSVPILRKNGMET RRIL+LKD+SG+ VE+TLWG+FCNR+G+QL
Sbjct: 327 ENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESGKAVEVTLWGEFCNRDGRQL 386

Query: 286 HEIVEAGVFPILAVKAGKVNDFSGKSISTISATQLFINPDFPEANRLRVWFDRGGKDTSS 107
            E+V++   P+LA+KAGKV+DFSGKS+ TIS+TQLFINPDFPEA++LR WFD GGKDT+S
Sbjct: 387 EEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTAS 446

Query: 106 HSISKEFIP-GARKNDVRKNLAQIKDEGLGRSDKPD 2
            SIS++ +P G  +N++RKN++QIK+EGLGRSDKPD
Sbjct: 447 FSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDKPD 482


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