BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00010653
         (4459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac...  1048   0.0  
ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E sub...  1006   0.0  
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E sub...   986   0.0  
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   968   0.0  
ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi...   908   0.0  

>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
          Length = 1902

 Score = 1048 bits (2711), Expect = 0.0
 Identities = 631/1506 (41%), Positives = 861/1506 (57%), Gaps = 123/1506 (8%)
 Frame = +2

Query: 2    LENIQQNIQKISPLLCHLRASYSEAIALQLDSYLRSVKIPVTNFILKSSAIGRLIDSKSE 181
            L+NIQ+NIQ +SPLL  LR+S++E + +Q ++++R  K PV NFIL SSA+G +IDS+S+
Sbjct: 432  LQNIQRNIQDLSPLLLQLRSSFNELVQVQFENHIREFKSPVGNFILISSALGSMIDSRSD 491

Query: 182  SALSKVVQQIGFLGIQISDKGKFYSETLVKDMSSLFHKKYPSYGDYPTEEFGLVSRPLFR 361
            SA+ K+VQQIGFLG+Q+SD+ KFYS  LV+D++SLFH+KYP    YP+EEFG VSR  F 
Sbjct: 492  SAIDKIVQQIGFLGLQLSDRRKFYSRGLVEDVASLFHQKYPFADVYPSEEFGFVSRCFFH 551

Query: 362  GLDPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKNLMAILRDVVICHDGTVRNMCSNSIVQ 541
            GLDPY+E+VH             GL EPGTLFKNLMA+LRDVVIC+DGTVRN+ SNS++Q
Sbjct: 552  GLDPYEEIVHSIATREVIVRSSKGLAEPGTLFKNLMAVLRDVVICYDGTVRNISSNSVIQ 611

Query: 542  FEYGVNGANIASEFCAGDPVGVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVSF 721
            FEYGV G    + F AGDPVGVLAATAMSNPAYKAVLD        W+MMKEIL C  +F
Sbjct: 612  FEYGVGGMQSQNLFPAGDPVGVLAATAMSNPAYKAVLDSSPNSNSSWDMMKEILFCRANF 671

Query: 722  KNITTDRQVLLYLNNCDCGRKHCQESAAFIVKNHLKKVSLKDTAIDFLIEY-RSQMAQEN 898
            +N   DR+V+LYLN+C CGRK+CQE+A+ +VKNHLKKVSL+D AI+  IEY R ++  E+
Sbjct: 672  RNDINDRRVILYLNDCCCGRKYCQENASCLVKNHLKKVSLRDAAIELAIEYKRPKLEPES 731

Query: 899  SDFNSGLVGHIHLNKTQLIQSNISMHDILEKCQDTINRNQKQKKVGSLFKRIDLXXXXXX 1078
             + ++GLVGHIHLN   L  S I MHDIL+KC++ +N  +K+KK G  FKRI L      
Sbjct: 732  CEIDAGLVGHIHLNSGLLKASGIGMHDILQKCEEQVNLLRKKKKYGYHFKRI-LLSVSDC 790

Query: 1079 XXXXXXXXKWTDVPCIQFLWQGASNDLLEKAPHILTDMVCPVLLETIIKGDPRVSTANII 1258
                    KWTD+PC++F WQ  ++  LE+  HI+ DM+CPVLL+TIIKGDPR+ST NII
Sbjct: 791  CFFNHSDSKWTDMPCLKFFWQDMTDTDLERTKHIMADMICPVLLDTIIKGDPRISTVNII 850

Query: 1259 WISPESATWIRSPCKSPKGELALDIILEKEAVVRSGDAWRVVIDSCLPVIHLIDVQRSIP 1438
            WI+P + TW++SPC S KGELA+++ LEKEAV  +GDAWR+V+D CLPV HLID +RSIP
Sbjct: 851  WINPGTTTWVQSPCSSTKGELAVEVALEKEAVRLTGDAWRIVLDCCLPVFHLIDTRRSIP 910

Query: 1439 YAIKQVEDLLGISCAFEQAVQRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNAGGI 1618
            YAIKQ++DL GISCAF+QAVQRLSTSVTMVTKGVLK+HLLLL +SMTCAG L+GFN  GI
Sbjct: 911  YAIKQIQDLFGISCAFDQAVQRLSTSVTMVTKGVLKEHLLLLASSMTCAGNLVGFNTSGI 970

Query: 1619 KSLSKSLGVQVPFMKATLFTPRKCFERAAEKCDVDNLSSIVASCAWGKHVSVGTGSPFEF 1798
            K+L ++L VQVPF +ATL+TPRKCFERA+EKC VD L+SIV SC+WGK VS+GTG+ F+ 
Sbjct: 971  KALCRALNVQVPFTEATLYTPRKCFERASEKCHVDTLASIVGSCSWGKRVSIGTGAKFDL 1030

Query: 1799 LWDTRKAELSPDQEIDVYNFLYMVNSSSRHEDMGSGCLGAEVEDLDEDDEYMDCNLSPVR 1978
            LW+T++ E++ D+  DVYNFL++V SS+  E++ SG LG ++E   E D YM+  LSP +
Sbjct: 1031 LWETKEIEMA-DKPTDVYNFLHLV-SSANEEEVDSGGLGEDIESF-EKDVYMEPALSPEQ 1087

Query: 1979 EDGADKPTFEDGIEFGLHGNDNDGLSKEDAN---DPWSSFGKKADSME----------ND 2119
            E   +K  FE+ +E G+   D+D    ++++    P S  G  A+ ++          + 
Sbjct: 1088 E---NKAVFEETLEIGV---DSDITGADESSWDAFPSSGTGWNANKIDTGSGSAEGGWSS 1141

Query: 2120 WTKKAEQSN-WGVKKVGSEENDWSKKAEEDNWTKKSDSTWDKTI---GSEVND----WGK 2275
            W  K +Q+N     K G   +  SK+  +   + KS   WD +    GS   D    WG+
Sbjct: 1142 WGSKKDQANPEDSSKTGGWSSGGSKQKPQPEDSSKSGG-WDASKSWGGSNQGDPSPVWGQ 1200

Query: 2276 KVDS------EESDWSKKPEDSSWG-----KRVNLEVNDGTE---RPDQNIWGKKANPEE 2413
             V +      E    S   E   W      K ++ + N  T       ++  G K     
Sbjct: 1201 PVKATNDISIENDHGSGSAEGGGWANSGMKKDLSKQENSSTAGGWDASKSWSGSKPKDPS 1260

Query: 2414 RDW--TKKIEEDNQTKKSDSTWDKTVGS----EVNDWGKKVD-------SEESGW----- 2539
              W   KK +++N  KKSDS  D   GS      + WG K D       + E+GW     
Sbjct: 1261 SAWGAGKKTDDNNGWKKSDSKKDLASGSVEDGGCSGWGPKKDLLQPEDSAGENGWGASKS 1320

Query: 2540 -SKKPEDSSWGKRVNLEVNDG--TQSPERNT--------WGKKTNPEERDWTKKPE---- 2674
             SK+P  S+WGK      N G    +P+R++        W  K   E + ++K+ +    
Sbjct: 1321 KSKEP-SSAWGKPAQETDNIGWKKNNPQRDSENLEGTSGWNDKLQKENKSFSKQSQPASS 1379

Query: 2675 ---DST-------------------WGKKVFSKEEVERSSWAEEATNNSAWGK-KVDSGE 2785
               DST                   W   V S   V++S+W +  T  ++W K + D  +
Sbjct: 1380 KDWDSTGNITAGSTGFGVEKGNEKPW--DVASNVSVKKSTWGQ--TGGNSWKKNEQDEKD 1435

Query: 2786 GD-----WAKK-DNQNKWASRSSSTNPHGQSVASSG---KDWAQNNDQNTLASARKPSVG 2938
            GD     W K   + + W S   + +P  Q V+        W Q  D    +       G
Sbjct: 1436 GDPQGLPWGKSHKSSDSWTSGQGNQHPVSQGVSEKQGTLSSWGQPRDS---SQKNNNENG 1492

Query: 2939 GQEGWGRDSEGMGWKKNDRQKNKDSSNKGWSKVNEHSSWENFTTPKTDAQSAWGGGDTQK 3118
                + R   G  W    ++ N  SS   W++  + S+W++    K    S      T  
Sbjct: 1493 VSSNFNRQGAGKSWDSKKKESNVQSS---WAQQGD-STWKD---SKEARSSVKANNSTNS 1545

Query: 3119 DAFS-GKSREDDLSLSASGAQWEAVKVEPSKASGWHTSGSGGGDSADVLGSKETPWEAKV 3295
              +S GK+  D +S S+ G+Q E     P   S   + G G  D  D      + W+AK 
Sbjct: 1546 GGWSTGKALVDGVS-SSWGSQKED---RPQPKSNDRSVGDGNFDK-DAKEEGLSSWDAKK 1600

Query: 3296 ADQETQ-XXXXXXXXXXXXXXXLDSESPAGENKESQLNSWGKQST----DSTPAQGWGSS 3460
             +++TQ                 D       N+  + + WG + T    DS     WG S
Sbjct: 1601 VERKTQSSWGQPSESKNSAQSSADHWGSDKSNQPGKSSGWGSEDTNAGKDSEKQDSWGKS 1660

Query: 3461 KVDI--SSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDWK--------- 3607
             V        +                                    G+WK         
Sbjct: 1661 NVSTWKKESGEKLHGSDDSQSPWGQPGGSGWNKKQPEGGRGWGSSNTGEWKSRKNQNQNQ 1720

Query: 3608 ----NKRARPVDDPNAPVVFTVTRQRLDLFTVEEQDVLLEIDTIMKNIRKVMHQTGYNDG 3775
                N+  R  +D +  V  T TR+R+D F  EE+DVL E++++M++IR++MHQ+G  DG
Sbjct: 1721 NQNQNRPPRGPNDDSPRVALTATRKRMDEFPTEEKDVLSEVESLMQSIRRIMHQSGCVDG 1780

Query: 3776 DPLSTDDQTYIIENVFNHHPDKAAKMGAGIAHIMVNRHKEFQDSRCFYAVSVDGVETDFS 3955
            +PL  DDQTY+I+N+ N+HPDKAAK+GAG+  I V +H  FQ+SRCFY VS DG +TDFS
Sbjct: 1781 EPLLPDDQTYLIDNILNYHPDKAAKIGAGVDFITVKKHSNFQESRCFYVVSTDGKDTDFS 1840

Query: 3956 YRKCLENFIRSKYPDVAEAFLPKYFKKPQ-PRPGWNRDRGPPRSEAGAPRWNRDQTPGPE 4132
            Y KC+E F++ KYP VAE+F  KYF++ Q P+P        P   + +P      +P P 
Sbjct: 1841 YIKCIETFVKGKYPSVAESFTSKYFRRSQRPQP------ASPSPASPSPTSPSPASPSPA 1894

Query: 4133 DATGTP 4150
                TP
Sbjct: 1895 PPNPTP 1900


>ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2098

 Score = 1006 bits (2600), Expect = 0.0
 Identities = 613/1537 (39%), Positives = 843/1537 (54%), Gaps = 137/1537 (8%)
 Frame = +2

Query: 11   IQQNIQKISPLLCHLRASYSEAIALQLDSYLRSVKIPVTNFILKSSAIGRLIDSKSESAL 190
            I+++I K+S LL  LR+ Y+E +A QL+ ++R V++P+ NF LKS+ +G LIDSKS+SA+
Sbjct: 638  IRKSIGKVSSLLYQLRSLYNELVAQQLEKHIRDVELPIINFALKSTKLGDLIDSKSKSAI 697

Query: 191  SKVVQQIGFLGIQISDKGKFYSETLVKDMSSLFHKKYPSYGD-YPTEEFGLVSRPLFRGL 367
             KVVQQIGFLG Q+ D+G+FYS+ LV D++S FH K    GD YP+ E+GL+    F GL
Sbjct: 698  DKVVQQIGFLGQQLFDRGRFYSKGLVDDVASHFHAKCCYDGDGYPSAEYGLLKGCFFNGL 757

Query: 368  DPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKNLMAILRDVVICHDGTVRNMCSNSIVQFE 547
            DPY+EMVH             GL+EPGTLFKNLMAILRDVVIC+DGTVRN+CSNSI+QFE
Sbjct: 758  DPYEEMVHSISTREIMVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFE 817

Query: 548  YGVNGANIASE-FCAGDPVGVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVSFK 724
            YG+   + +   F AG+PVGVLAATAMSNPAYKAVLD        WE+MKEILLC V+F+
Sbjct: 818  YGIQAGDKSEHLFPAGEPVGVLAATAMSNPAYKAVLDASPSSNSSWELMKEILLCKVNFR 877

Query: 725  NITTDRQVLLYLNNCDCGRKHCQESAAFIVKNHLKKVSLKDTAIDFLIEYRSQMAQ-ENS 901
            N   DR+V+LYLN+CDCG  +C+E+AA+ VK+ L+KVSLKD A++F+IEY+ Q  Q ENS
Sbjct: 878  NELVDRRVILYLNDCDCGGSYCRENAAYSVKDQLRKVSLKDAAVEFIIEYQQQRTQKENS 937

Query: 902  DFNSGLVGHIHLNKTQLIQSNISMHDILEKCQDTINRNQKQKKVGSLFKRIDLXXXXXXX 1081
            + + GLVGHI+L++  L +  ISM  + +KC + +    ++KKV    K I+L       
Sbjct: 938  ETDVGLVGHIYLDEMMLEELKISMAYVFDKCHERLKSFSQKKKVNQSLKNIELSFSLFVG 997

Query: 1082 XXXXXXX----------KWTDVPCIQFLWQGASNDLLEKAPHILTDMVCPVLLETIIKGD 1231
                                  PC+ F  +   +DL + A  +L + +CPVL +TII+GD
Sbjct: 998  LYHFLIMFHLSSESCSSSHPAAPCLTFWLKNYDSDL-DNAVKVLAEKICPVLFKTIIQGD 1056

Query: 1232 PRVSTANIIWISPESATWIRSPCKSPKGELALDIILEKEAVVRSGDAWRVVIDSCLPVIH 1411
            PR+S+A+IIW+SP++ TW+R+P KS  GELALDIILEKEAV +SGDAWRVV+D+CLPV+H
Sbjct: 1057 PRISSASIIWVSPDTNTWVRNPYKSSNGELALDIILEKEAVKQSGDAWRVVLDACLPVLH 1116

Query: 1412 LIDVQRSIPYAIKQVEDLLGISCAFEQAVQRLSTSVTMVTKGVLKDHLLLLGNSMTCAGT 1591
            LID +RSIPYAIKQ+++LLGISC F+QA+QR++ SV MV KGVL++HL+LL +SMTC G 
Sbjct: 1117 LIDTRRSIPYAIKQIQELLGISCTFDQAIQRVAASVKMVAKGVLREHLILLASSMTCGGN 1176

Query: 1592 LIGFNAGGIKSLSKSLGVQVPFMKATLFTPRKCFERAAEKCDVDNLSSIVASCAWGKHVS 1771
            L+GFN GG K+LS+ L +QVPF  ATLFTP+KCFERAAEKC  D+LSSIVASC+WGKHV+
Sbjct: 1177 LVGFNIGGYKALSRQLNIQVPFTDATLFTPKKCFERAAEKCHTDSLSSIVASCSWGKHVA 1236

Query: 1772 VGTGSPFEFLWDTRKAELSPDQEIDVYNFLYMVNSSSRHEDMGSGCLGAEVEDLDEDDEY 1951
            VGTGS F+ +WD  + + +  + +DVY+FL+MV S +  E+    CLG +++DL E +EY
Sbjct: 1237 VGTGSKFDVVWDANEIKSNEIEGMDVYSFLHMVKSFTNGEEETDACLGEDIDDLLE-EEY 1295

Query: 1952 MDCNLSPVREDGADKPTFEDGIEFGLHGNDNDGLSKEDANDPWSSFGKKADSMENDWTKK 2131
            MD  +SP    G +   FE+  E  L+G+ ++G         W     + +S  N+W+  
Sbjct: 1296 MDLGMSPQHNSGFE-AVFEENPEV-LNGSTSNG---------WDVSSNQGESKTNEWSGW 1344

Query: 2132 AEQSNWGVKKVGSE---ENDWSKKAEEDN------WTKKSDSTWDKTIGSEVNDWGKKVD 2284
            A  +   +K   SE   +N W K   +++      W+  + +   KT  +E + WG    
Sbjct: 1345 ASSNKAEIKDGRSEIAPKNSWGKTVNQEDSSKSNPWSTSTIADQTKTKSNEWSAWGSNKS 1404

Query: 2285 SEESDW------------SKKPEDSSWGKRVNLEVND--------------GTERPDQNI 2386
                 W            S+  +++SWGK VN E +                T+  + + 
Sbjct: 1405 EIPVGWASSNKTEIKDGRSETAQENSWGKTVNQEDSSKSNAWNTSTTVDHANTKSNEWSA 1464

Query: 2387 WGKKANPEERDWTKKIEED---NQTKKSD---------STW-----DKTVGSEVNDWGKK 2515
            WG   +      +K ++ED   +   K+D           W     D+T  SE + WGKK
Sbjct: 1465 WGSNQSEIPAGGSKAVQEDSWGSSKWKADVAQEDNSRLGAWDANAADQTKSSEWSGWGKK 1524

Query: 2516 VD------SEESGWSKKPED-------SSWGKRVNLEVNDG-------------TQSPER 2617
             D      S    W     D       S WGK+ ++   D              T+S E 
Sbjct: 1525 KDVTQEDNSRLGAWDANAADQTKSRDWSGWGKKKDITQEDNSRLGAWDANAADQTKSSEW 1584

Query: 2618 NTWGKKTNPEERD------W-------TKKPEDSTWGKK--VFSKEEVERSSW----AEE 2740
            + WGKK +  + D      W       TK  E S WGKK  V  ++     +W    A++
Sbjct: 1585 SGWGKKKDVTQEDNSRLGAWDANTADQTKSNEWSGWGKKKEVTQEDNSRLGAWDANTADQ 1644

Query: 2741 ATNN--SAWGKKV-------------DSGEGDWAKKDNQNKWASRSSSTNPHGQSVASSG 2875
              +N  S WGKK              D+   D  K +  + W  +   T      + +  
Sbjct: 1645 TKSNEWSGWGKKKEVTQEDNSRFGAWDANAEDQTKSNEWSGWGKKKDVTQEDNSRLGAWD 1704

Query: 2876 KDWAQNNDQNTLASARKPSVGGQEGWGRDSEGMGWKKNDRQKNKDSSNKGW--------- 3028
             + A     N  +   K     QE   +DS G G +K+   +  +S + GW         
Sbjct: 1705 ANAADQTKSNEWSDWGKKKEVTQEDNVQDSWGSGKRKDKVTQEDNSGSGGWGANRTDLAK 1764

Query: 3029 SKVNEHSSWENFTTPKTDAQSAWGGGD-TQKDAFSGKSREDDLSLSASGAQWEAVKVEPS 3205
            SK +E SSW      K  ++   GG +  Q D++     EDD     SG+ W   K E  
Sbjct: 1765 SKSSEWSSW-----GKNKSEIPAGGSENVQNDSWGSGKLEDDTQKENSGSAWVRNKAET- 1818

Query: 3206 KASGWHTSGSGGGDSADVLGSKETPWEAKVADQETQXXXXXXXXXXXXXXXLDSESPAGE 3385
                    G       D   S     E+KV +                       +  G+
Sbjct: 1819 ------IDGGSEKPQEDAWNSGNWKAESKVGN-----------------------ASWGK 1849

Query: 3386 NKESQLNSWG--KQSTDSTPAQGWGSSKVDISSENDXXXXXXXXXXXXXXXXXXXXXXXX 3559
             K S+  +W    QS  ++ +QGW S     +SE++                        
Sbjct: 1850 PKSSESQAWDSHNQSNQNSSSQGWESHIASANSESEKGFQWGKQGRDSFKKNRFEGSQGR 1909

Query: 3560 XXXXXXXXXXXDGDWKNKRARPVDDPNAPVVFTVTRQRLDLFTVEEQDVLLEIDTIMKNI 3739
                        GDWKN R RP   P AP       QRLD+++  EQDVL +I+ IM++I
Sbjct: 1910 GSNA--------GDWKN-RNRP---PRAP------GQRLDIYSSGEQDVLKDIEPIMQSI 1951

Query: 3740 RKVMHQTGYNDGDPLSTDDQTYIIENVFNHHPDKAAKMGAGIAHIMVNRHKEFQDSRCFY 3919
            R++M Q GYNDGDPL+ +DQ +++ENVF HHPDK  KMG GI ++MVN+H  FQ+SRCFY
Sbjct: 1952 RRIMQQQGYNDGDPLAAEDQLFVLENVFEHHPDKETKMGTGIDYVMVNKHSSFQESRCFY 2011

Query: 3920 AVSVDGVETDFSYRKCLENFIRSKYPDVAEAFLPKYFKKPQPRPGWNRDRGPPRSEAGAP 4099
             V  DG   DFSYRKCL N+I  KYPD+AE+FL KYF+KP       R RG   +  G  
Sbjct: 2012 VVCKDGESKDFSYRKCLANYISKKYPDLAESFLGKYFRKP-------RARGDQTATPG-- 2062

Query: 4100 RWNRDQTPGPEDATGTPGWSKSEAGTPRWNSDQTPAP 4210
               RD+   P + T TPG  + EA TP      TP P
Sbjct: 2063 ---RDEAATPGEQTATPG--RDEAATPA-EQISTPTP 2093


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2020

 Score =  986 bits (2549), Expect = 0.0
 Identities = 583/1448 (40%), Positives = 824/1448 (56%), Gaps = 67/1448 (4%)
 Frame = +2

Query: 11   IQQNIQKISPLLCHLRASYSEAIALQLDSYLRSVKIPVTNFILKSSAIGRLIDSKSESAL 190
            I+++I K S LL  LR+ Y+E +A QL+ +++ V++P+ NF LKS+ +G LIDSKS+S +
Sbjct: 638  IRRSIGKASSLLYQLRSLYNELVAQQLEKHIQDVELPIINFALKSTKLGDLIDSKSKSTI 697

Query: 191  SKVVQQIGFLGIQISDKGKFYSETLVKDMSSLFHKKYPSYGD-YPTEEFGLVSRPLFRGL 367
             KVVQQ+GFLG Q+ D+G+FYS+ LV D++S FH K    GD YP+ E+GL+    F GL
Sbjct: 698  DKVVQQVGFLGQQLFDRGRFYSKGLVDDVASHFHAKCCYDGDGYPSAEYGLLKGCFFNGL 757

Query: 368  DPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKNLMAILRDVVICHDGTVRNMCSNSIVQFE 547
            DPY+EMVH             GL+EPGTLFKNLMAILRDVVIC+DGTVRN+CSNSI+QFE
Sbjct: 758  DPYEEMVHSISTREIMVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFE 817

Query: 548  YGVNGANIASE-FCAGDPVGVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVSFK 724
            YG+   +     F AG+PVGVLAATAMSNPAYKAVLD        WE+MKEILLC V+F+
Sbjct: 818  YGIQAGDKTEHLFPAGEPVGVLAATAMSNPAYKAVLDASPNSNSSWELMKEILLCKVNFR 877

Query: 725  NITTDRQVLLYLNNCDCGRKHCQESAAFIVKNHLKKVSLKDTAIDFLIEYRSQMAQ-ENS 901
            N   DR+V+LYLN+CDCG   C+E+AA+ VKN L+KVSLK+ A++F+IEY+ Q  Q ENS
Sbjct: 878  NEPVDRRVILYLNDCDCGGSCCRENAAYSVKNQLRKVSLKNAAVEFIIEYQQQRTQKENS 937

Query: 902  DFNSGLVGHIHLNKTQLIQSNISMHDILEKCQDTINRNQKQKKVGSLFKRIDLXXXXXXX 1081
            + ++GLVGHI+L++  L +  ISM ++ EKC + +    ++KKV    K I+L       
Sbjct: 938  ETDAGLVGHIYLDEMMLEELKISMANVFEKCLERLKSFSRKKKVNQYLKNIELSFSESCS 997

Query: 1082 XXXXXXXKWTDVPCIQFLWQGASNDLLEKAPHILTDMVCPVLLETIIKGDPRVSTANIIW 1261
                        PC+ F  +   +DL + A  +L++ +CPVL ETIIKGDPR+S+A+IIW
Sbjct: 998  SSHPA------APCLTFWLKNHDSDL-DNAVKVLSENICPVLFETIIKGDPRISSASIIW 1050

Query: 1262 ISPESATWIRSPCKSPKGELALDIILEKEAVVRSGDAWRVVIDSCLPVIHLIDVQRSIPY 1441
            +SP++ TW+R+P KS  GELALDI+LE+EAV +SGDAWR+V+DSCLPV+HLID +RSIPY
Sbjct: 1051 VSPDTNTWVRNPYKSSNGELALDIVLEEEAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPY 1110

Query: 1442 AIKQVEDLLGISCAFEQAVQRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNAGGIK 1621
            AIKQ+++LLGISC F+QA+QR++ SV MV KGVL++HL+LL +SMTC G L+GFN GG K
Sbjct: 1111 AIKQIQELLGISCTFDQAIQRVAASVKMVAKGVLREHLILLASSMTCGGNLVGFNTGGYK 1170

Query: 1622 SLSKSLGVQVPFMKATLFTPRKCFERAAEKCDVDNLSSIVASCAWGKHVSVGTGSPFEFL 1801
            +LS+ L +QVPF  ATLFTP+KCFERAAEKC  D+LSSIVASC+WGKHV+VGTGS F+ +
Sbjct: 1171 ALSRQLNIQVPFTDATLFTPKKCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDIV 1230

Query: 1802 WDTRKAELSPDQEIDVYNFLYMVNSSSRHEDMGSGCLGAEVEDLDEDDEYMDCNLSPVRE 1981
            WD+ + + +  + +DVY+FL+MV S +  E+    CLG +++DL E +EYMD  +SP   
Sbjct: 1231 WDSSEIKSNEIEGMDVYSFLHMVKSVTNGEEETDACLGEDIDDLLE-EEYMDLGMSPQHN 1289

Query: 1982 DGADKPTFEDGIEFGLHGNDNDGLSKEDANDPWSSFGKKADSMENDWTKKAEQSNWGVKK 2161
             G +   FE+  E  L+G+ ++G         W     +  S  N+W+  A  SN   + 
Sbjct: 1290 SGFE-AVFEENPEV-LNGSTSNG---------WDVSSNQTQSKTNEWSGWA-SSNKDGRS 1337

Query: 2162 VGSEENDWSKKAEEDN------WTKKSDSTWDKTIGSEVNDWGKKVDSEESDWSKK-PED 2320
              ++EN W K   +++      W   + +   KT  +E +DWG       +  SK   ED
Sbjct: 1338 ETAQENSWGKTVNQEDSSKSNAWNTSTTADQTKTKSNEWSDWGSNKSEIPAGGSKAVQED 1397

Query: 2321 SSWGKRVNLEVNDG---TERPDQNIWGKKANPEERDWTKKIEEDNQTKKSDSTWDKTVGS 2491
            SS     N         T+  + + WG   +      +K ++ED+      +TW+    S
Sbjct: 1398 SSKSNAWNTSTTSNQTKTKSKEWSAWGSNKSEIPACGSKAVQEDS---SKSNTWNT---S 1451

Query: 2492 EVNDWGKKVDSEESGW-SKKPEDSSWGKRVNLEVNDGTQSPERNTWGKKTNPEERDW--- 2659
               D  K   +E S W S K E  + G +   E +  + +  R+T   +T  +  +W   
Sbjct: 1452 TTADQTKTKSNEWSAWGSNKSEIPAGGSKAVQEDSSKSNAWNRSTTADQTKTKSNEWSAW 1511

Query: 2660 -TKKPEDSTWGKKVFSKEEVERSSWAEEATNN---------SAWG---KKVDSGEGDWAK 2800
             + K E    G K   ++  + ++W    T +         SAWG    ++ +G     +
Sbjct: 1512 GSNKSEIPAGGSKAVQEDSSKSNAWNTSTTADQTKTKSNEWSAWGSNKSEIPAGGSKAVQ 1571

Query: 2801 KDNQNKWASRSSSTNPHGQSVASSGKDWAQNNDQNTLASARKPSVGGQEGWGRDSEGMGW 2980
            +D+   W     +T+       +   +W+      +   A       ++ WG       W
Sbjct: 1572 EDSSKAW-----NTSTTADQTKTKSNEWSARVSNKSEIPAGGSKAVQEDSWGSSK----W 1622

Query: 2981 KKNDRQKNK------DSSNKGWSKVNEHSSW--ENFTTPKTDAQSAWGGGD-----TQKD 3121
            K +  Q++       D++    +K NE S W  +   T + + Q +WG G      TQ+D
Sbjct: 1623 KADVAQEDNSRLGAWDANAADQTKSNEWSGWGKKKDVTQEDNVQHSWGSGKRKDKVTQED 1682

Query: 3122 AFS----GKSRED-DLSLSASGAQWEAVKVE---------------PSKASGWHTSGSGG 3241
                   G +R D  ++ S+  + W   K E                 K +      SG 
Sbjct: 1683 NSGSGDWGANRTDLAITKSSEWSSWGKNKTEIPAGGSANVQNDSWGLGKLNDTQKDNSGC 1742

Query: 3242 GDSADVLGSKETPWEAKVADQETQXXXXXXXXXXXXXXXLD-SESPAGENKESQLNSWG- 3415
            G   +  GS     +A+  D  ++                    +  G+ K S+ ++W  
Sbjct: 1743 GAWGENSGSAWVRNKAETIDGGSEKPQEDAWNSGNWKAESKVGNTTWGKPKSSESHAWDS 1802

Query: 3416 -KQSTDSTPAQGWGSSKVDISSENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3592
              QS  ++ +QGW S     +SEN+                                   
Sbjct: 1803 HNQSNQNSSSQGWESHIASANSENEKGFQWGKGRDSFKKNRFEGSQGRGSNA-------- 1854

Query: 3593 DGDWKNKRARPVDDPNAPVVFTVTRQRLDLFTVEEQDVLLEIDTIMKNIRKVMHQTGYND 3772
             GDWKN R RP   P AP       QRLD+++ EEQDVL +I+ IM++IR++M Q GY+D
Sbjct: 1855 -GDWKN-RNRP---PRAP------GQRLDIYSSEEQDVLKDIEPIMQSIRRIMQQQGYSD 1903

Query: 3773 GDPLSTDDQTYIIENVFNHHPDKAAKMGAGIAHIMVNRHKEFQDSRCFYAVSVDGVETDF 3952
            GDPL+ +DQ +++ENVF HHPDK  KMGAGI ++MVN+H  FQ+SRCFY V  DG   DF
Sbjct: 1904 GDPLAAEDQLFVLENVFEHHPDKETKMGAGIDYVMVNKHSSFQESRCFYVVCKDGQSKDF 1963

Query: 3953 SYRKCLENFIRSKYPDVAEAFLPKYFKKPQPRPGWNRDRGPPRSEAGAPRWNRDQTPGP- 4129
            SYRKCL N+I  KYPD+AE+FL KYF+KP       R RG   +  G      DQT  P 
Sbjct: 1964 SYRKCLANYISKKYPDLAESFLGKYFRKP-------RARGDQTATLGG-----DQTATPA 2011

Query: 4130 EDATGTPG 4153
            +D   T G
Sbjct: 2012 QDEAATSG 2019


>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score =  968 bits (2502), Expect = 0.0
 Identities = 569/1456 (39%), Positives = 795/1456 (54%), Gaps = 50/1456 (3%)
 Frame = +2

Query: 11   IQQNIQKISPLLCHLRASYSEAIALQLDSYLRSVKIPVTNFILKSSAIGRLIDSKSESAL 190
            I ++I K+SPLL  LR  Y E +A QL+  ++ +++PV NF LKS+ +G LIDSKS+SA+
Sbjct: 720  INRSIGKVSPLLRQLRGMYKELVAQQLEKVIQDIELPVINFALKSTKLGDLIDSKSKSAV 779

Query: 191  SKVVQQIGFLGIQISDKGKFYSETLVKDMSSLFHKK-YPSYGDYPTEEFGLVSRPLFRGL 367
             KV+QQIGFLG Q+ ++GKFYS+ LV+D++S F  K +    DYP+ EFGL+    F GL
Sbjct: 780  DKVIQQIGFLGQQLFERGKFYSKGLVEDVASHFQLKCFYDKDDYPSAEFGLLKGCFFHGL 839

Query: 368  DPYQEMVHXXXXXXXXXXXXXGLTEPGTLFKNLMAILRDVVICHDGTVRNMCSNSIVQFE 547
            DPY+E+VH             GL+EPGTLFKNLMAILRDVVIC+DGTVRN+CSNSI+QFE
Sbjct: 840  DPYEELVHSIATREIIDRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFE 899

Query: 548  YGVNGANIASE-FCAGDPVGVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVSFK 724
            YG+   + A   F AG+PVGVLAAT+MSNPAYKAVLD        W  MKEILLC V+F+
Sbjct: 900  YGIQSGDAAQHLFPAGEPVGVLAATSMSNPAYKAVLDASPSSNSSWGFMKEILLCKVNFR 959

Query: 725  NITTDRQVLLYLNNCDCGRKHCQESAAFIVKNHLKKVSLKDTAIDFLIEYRSQMAQENSD 904
            N   DR+V+LYLN+CDCGR +C+E+AA++V+N L+KVSLKD A+DF++EY+ Q  + +  
Sbjct: 960  NEPNDRRVILYLNDCDCGRNYCRENAAYLVQNQLRKVSLKDAALDFIVEYQQQRRRRDGT 1019

Query: 905  FNSGLVGHIHLNKTQLIQSNISMHDILEKCQDTINRNQKQKKVGSLFKRIDLXXXXXXXX 1084
             ++GLV HI L + +L +  I+M ++ +KCQ+ +N   ++KK+   FKR +L        
Sbjct: 1020 EDAGLVCHIRLKEVKLEELKINMTEVYQKCQEKLNSFSRKKKLSPFFKRTELIFS----- 1074

Query: 1085 XXXXXXKWTDVPCIQFLWQGASNDLLEKAPHILTDMVCPVLLETIIKGDPRVSTANIIWI 1264
                  ++   PC+ FLW    +  L++   +L DM+CPVLLETII+GDPR+S+A+IIW+
Sbjct: 1075 ------EFCSAPCVTFLWPDGVD--LDQTTKVLADMICPVLLETIIQGDPRISSASIIWV 1126

Query: 1265 SPESATWIRSPCKSPKGELALDIILEKEAVVRSGDAWRVVIDSCLPVIHLIDVQRSIPYA 1444
            +P + TW+R+P KS  GELALD+ILEKEAV +SGDAWR+V+DSCLPV+HLID +RSIPYA
Sbjct: 1127 NPGTNTWVRNPSKSSNGELALDVILEKEAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYA 1186

Query: 1445 IKQVEDLLGISCAFEQAVQRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNAGGIKS 1624
            IKQ+++LLGI+C F+QA+QRL+ SV MV KGVL++HL+LL +SMTC G L+GFN GG K+
Sbjct: 1187 IKQIQELLGIACTFDQAIQRLAASVRMVAKGVLREHLILLASSMTCGGNLVGFNTGGYKT 1246

Query: 1625 LSKSLGVQVPFMKATLF--------------------------TPRKCFERAAEKCDVDN 1726
            L++ L +QVPF  ATLF                          TPRKCFERAAEK   D+
Sbjct: 1247 LARQLDIQVPFTDATLFVSALVISKLQDVFCYYFSYFVNVIMQTPRKCFERAAEKHHSDS 1306

Query: 1727 LSSIVASCAWGKHVSVGTGSPFEFLWDTRKAELSPDQEIDVYNFLYMVNSSSRHEDMGSG 1906
            LSSIVASC+WGKHV+VGTGS F+ +WD ++ + +  + ++VY FL MV   +  E+  + 
Sbjct: 1307 LSSIVASCSWGKHVAVGTGSKFDIVWDPKEIKTNEIEGMNVYKFLNMVKGLANGEEETNA 1366

Query: 1907 CLGAEVEDLDEDDEYMDCNLSPVREDGADKPTFEDGIEFGLHGNDNDGLSKEDANDP--- 2077
            CLG +++DL  DDE  D ++SP    G D   F++  E       N   S +D  D    
Sbjct: 1367 CLGEDIDDLF-DDENGDFDMSPQHASGFDA-VFDETFELPNGSTSNGWDSNKDQIDQPNT 1424

Query: 2078 ----WSSFGKKADSMENDWTKK--AEQSNWGV---KKVGSEENDWSKKAEEDNWTKKSDS 2230
                WS +G     ++ D  ++  ++ S WG    +K     + W K   +++ +K    
Sbjct: 1425 NSNDWSGWGPNKSDLQVDVIQEDSSKSSAWGAATNQKSDQSASAWGKAVVQEDSSKSGAW 1484

Query: 2231 TWDKTIGSEVNDWGKKVDSEESDWSKKPEDSSWGKRVNLEVNDGTERPDQNIWGKKANPE 2410
                   SE   WG   + ++SD S     S+WGK V  E     +      WG   +  
Sbjct: 1485 GTATNQNSEQPSWGAATN-QKSDQSA----SAWGKAVVQE-----DSSKSGAWGNAKSVV 1534

Query: 2411 ERDWTKKIEEDNQTKKSD-STWDKTVGSEVNDWGKKVDSEESGWSKKPEDSSWGKRVNLE 2587
            + D +K     N    SD S W +  G E    G      ESG +KK     W   V+ E
Sbjct: 1535 QEDSSKSGAPANTNHSSDQSCWGQITGGEERAQG------ESGGTKK-----WKADVSQE 1583

Query: 2588 VNDGTQSPERNTWGKKTNPEERDWTKKPEDSTWGKKVFSKEEVERSSWAEEATNNSAWGK 2767
              D T S     WG          + K +DS   +K  + E+V +    +++  +SAWG 
Sbjct: 1584 --DSTNSGGWKAWGSSKPEVHEGESTKVQDSWNSQKWKAGEDVSQ----KDSQKSSAWGA 1637

Query: 2768 ---KVDSGEGDWA-KKDNQNKWASRSSSTNPHGQSVASSGKDWAQNNDQNTLASARKPSV 2935
               K +     W  KKD  +     SS +N   Q   +    W           A+ P  
Sbjct: 1638 TKPKSNDNRSSWGQKKDEIHVMPEDSSRSNAWEQKPENVKDSWV----------AKVPVA 1687

Query: 2936 GGQEGWGRDSEGMGWKKNDRQKNKDSSNKGWSKVNEHSSWENFTTPKTDAQSAWGGGDTQ 3115
                G  +  E   W      KN+ +++ G     E+  W++    K ++ S+WG     
Sbjct: 1688 NSSWGKAKSPENRPWDS----KNEPNNSFGKPNSQENEPWDS----KNESDSSWG----- 1734

Query: 3116 KDAFSGKSREDDLSLSASGAQWEAVKVEPSKASGWHTSGSGGGDSADVLGSKETPWEAKV 3295
                                     K +  ++  W +              +  PW++K 
Sbjct: 1735 -------------------------KPKSQESQPWDSKNESNSSWGKPKSQENHPWDSKN 1769

Query: 3296 ADQETQXXXXXXXXXXXXXXXLDSESPAGENKESQLNSWGKQSTDSTPAQGWGSSKVDIS 3475
               +T                 DS+  +  ++  +   WGKQ  DS     +  S+    
Sbjct: 1770 ESNQTAGSRGW-----------DSQVASANSESDKSFQWGKQGRDSFKKNRFEGSQ---- 1814

Query: 3476 SENDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDWKNKRARPVDDPNAPVVF 3655
                                                    GDWKN R+RPV  P      
Sbjct: 1815 ----------------------------------SGGPNAGDWKN-RSRPVRPPG----- 1834

Query: 3656 TVTRQRLDLFTVEEQDVLLEIDTIMKNIRKVMHQTGYNDGDPLSTDDQTYIIENVFNHHP 3835
                QR +L+T EEQD++ +I+ I+++IR++M   GYNDGDPL+ +DQ Y++ENVF HHP
Sbjct: 1835 ----QRFELYTPEEQDIMKDIEPIVQSIRRIMQLQGYNDGDPLANEDQKYVLENVFEHHP 1890

Query: 3836 DKAAKMGAGIAHIMVNRHKEFQDSRCFYAVSVDGVETDFSYRKCLENFIRSKYPDVAEAF 4015
            DK  KMG G+ H+MV++H  FQDSRC Y V  DG + DFSYRKCLEN +R KYP+ AE+F
Sbjct: 1891 DKETKMGVGVDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPETAESF 1950

Query: 4016 LPKYFKKPQPRPGWNRDRGPPRSEAGAPRWNRDQTPGPEDA---TGTPGWSKSEAGTPRW 4186
              KYF+KPQPR   ++   P   +  AP    +QT  P  A   T T      +  TP  
Sbjct: 1951 CGKYFRKPQPRVKRDQTPNPAGEQTAAPNPAGEQTAAPNPAGEQTATQNPPGEQTSTPNP 2010

Query: 4187 NSDQTPAP--DDVSTP 4228
              +QTP P  D  STP
Sbjct: 2011 AEEQTPTPAGDQTSTP 2026


>ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi|297325678|gb|EFH56098.1|
            NRPD1b [Arabidopsis lyrata subsp. lyrata]
          Length = 1947

 Score =  908 bits (2346), Expect = 0.0
 Identities = 561/1473 (38%), Positives = 784/1473 (53%), Gaps = 39/1473 (2%)
 Frame = +2

Query: 23   IQKISPLLCHLRASYSEAIALQLDSYLRSVKIPVTNFILKSSAIGRLIDSKSESALSKVV 202
            I++ISP++  LR SY +   LQL++ L  VK    NF+LKS ++  LID KS SA++K+V
Sbjct: 639  IREISPMVSRLRLSYRDE--LQLENSLHKVKEVAANFMLKSYSMRNLIDIKSNSAITKLV 696

Query: 203  QQIGFLGIQISDKGKFYSETLVKDMSSLFHKKYPSYGDYPTEEFGLVSRPLFRGLDPYQE 382
            QQ GFLG+Q+SDK KFY++TLV+DM+    +KY       + +FG+V    F GLDPY+E
Sbjct: 697  QQTGFLGLQLSDKKKFYTKTLVEDMALFCKRKYGRISS--SGDFGIVKGCFFHGLDPYEE 754

Query: 383  MVHXXXXXXXXXXXXXGLTEPGTLFKNLMAILRDVVICHDGTVRNMCSNSIVQFEYGVNG 562
            M H             GL EPGTLFKNLMA+LRD+VI +DGTVRN CSNS+VQF YGV+ 
Sbjct: 755  MAHSIAAREVIVRSSRGLAEPGTLFKNLMAVLRDIVITNDGTVRNTCSNSVVQFTYGVDS 814

Query: 563  AN-IASEFCAGDPVGVLAATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVSFKNITTD 739
                   F AG+PVGVLAATAMSNPAYKAVLD        WE MKE+LLC V+F+N T D
Sbjct: 815  ERGHQGLFEAGEPVGVLAATAMSNPAYKAVLDSTANSNSSWEQMKEVLLCKVNFQNTTND 874

Query: 740  RQVLLYLNNCDCGRKHCQESAAFIVKNHLKKVSLKDTAIDFLIEYRSQMA-QENSDFNSG 916
            R+V+LYLN C CG++ CQE+AA+ V+N LKKVSLKDTA++FL+EYR Q    E    +S 
Sbjct: 875  RRVILYLNECHCGKRFCQENAAYTVRNKLKKVSLKDTAVEFLVEYRKQQTISEIFGIDSC 934

Query: 917  LVGHIHLNKTQLIQSNISMHDILEKCQDTINR--NQKQKKVGSLFKRIDLXXXXXXXXXX 1090
            L GHIHL+KT L   NISM DIL+KC+D IN    +K+KK    FKR  L          
Sbjct: 935  LHGHIHLDKTLLQDWNISMQDILQKCEDVINSLGQKKKKKATDDFKRTSLSVSECCSFQD 994

Query: 1091 XXXXKWTDVPCIQFLWQGASNDLLEKAPHILTDMVCPVLLETIIKGDPRVSTANIIWISP 1270
                K +D+PC+ F +     DL E+   +L + + PVLLET+IKGDPR+ +ANIIW S 
Sbjct: 995  PCGRKDSDMPCLMFSYSATDPDL-ERTLDVLCNTIYPVLLETVIKGDPRICSANIIWNSS 1053

Query: 1271 ESATWIRSPCKSPKGELALDIILEKEAVVRSGDAWRVVIDSCLPVIHLIDVQRSIPYAIK 1450
            +  TWIR+   S +GE  LD+ +EK AV +SGDAWRVVID+CL V+HLID +RSIPY+IK
Sbjct: 1054 DMTTWIRNCHASRRGEWVLDVTVEKSAVKQSGDAWRVVIDACLSVLHLIDTKRSIPYSIK 1113

Query: 1451 QVEDLLGISCAFEQAVQRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNAGGIKSLS 1630
            QV++LLG+SCAFEQAVQRLS SV MV+KGVLK+H++LL N+MTC+G ++GFN+GG K+L+
Sbjct: 1114 QVQELLGLSCAFEQAVQRLSASVRMVSKGVLKEHIILLANNMTCSGNMLGFNSGGYKALT 1173

Query: 1631 KSLGVQVPFMKATLFTPRKCFERAAEKCDVDNLSSIVASCAWGKHVSVGTGSPFEFLWDT 1810
            +SL ++ PF +ATL TPR+CFE+AAEKC  D+LS++V SC+WGK V VGTGS FE LW+ 
Sbjct: 1174 RSLNIKAPFTEATLITPRRCFEKAAEKCHTDSLSTVVGSCSWGKRVDVGTGSQFELLWNQ 1233

Query: 1811 RKAELSPDQEIDVYNFLYMVNSSSRHEDMGSGCLGAEVEDLDEDDEYMDCNLSPVREDGA 1990
            ++  L   +E DVY+FL MV S++ + D      G +V     ++E  +   SP R+   
Sbjct: 1234 KETGLDDKEETDVYSFLQMVRSTT-NADAYVSSPGFDV----TEEEMAEWAESPERDSAL 1288

Query: 1991 DKPTFEDGIEF-GLHGNDNDGLSKEDANDPWSSFGKKADSMENDWTKKAEQSNWGV-KKV 2164
             +P FED  EF  LH          D   P  S  +K+ S +N  +  +E   WGV K  
Sbjct: 1289 GEPKFEDSAEFQNLH----------DEGKPSESNWEKSSSWDNGCSGGSE---WGVSKNT 1335

Query: 2165 GSEENDWSKKAEEDNWTKKSDSTWDKTIGSEVND----WGKKVDSEESDWSKKPEDSSWG 2332
            G E N               +S W+KT   E  D    W  K D++ES  SK     +WG
Sbjct: 1336 GGEAN--------------PESNWEKTTNVEKEDAWSSWNTKKDAQES--SKSDSGVAWG 1379

Query: 2333 KRVNLEVNDGT-----------------ERPDQNIWGKKANPEERDWTKKIEEDNQTKKS 2461
             +   +  D T                   P  ++WG K+   ++ W KK   +  T+ +
Sbjct: 1380 LKTKDDDADTTPNWETRPAQTDSIVPENNEPTSDVWGHKSG-SDKSWDKK---NGGTESA 1435

Query: 2462 DSTWDKTVGSEVNDWGKKVDSEESGWSKKPEDSSWGKRVNLEVNDGTQSPERNTWGKKTN 2641
             + W  T   +   WG    S++     + + ++WG R       G+ +     W KK++
Sbjct: 1436 PAAWGST---DAAVWG---SSDKKNSETESDAAAWGSRDKKNSEVGSGAGVLGPWNKKSS 1489

Query: 2642 PEERDWTKKPEDSTWGKKVFSKEEVERSSWAEEATNNSAWGKKVDSGEGDWAKKDNQNKW 2821
              E D       +TWG     K +   ++W       S+W KK    + + A       W
Sbjct: 1490 KTESD------GATWGSS--DKTKSGAAAW-------SSWDKKNMETDSEPA------AW 1528

Query: 2822 ASRSSSTNPHGQSVASSGKDWAQNNDQNTLASARKPSVGGQEGWGRDSEGMGWKKNDRQK 3001
             S+S +  P  +S  S+   W          + +  +  G  GW     G+  KKN   +
Sbjct: 1529 GSQSKN-KPETESGPSTWGAW---------DTKKSETESGPAGW-----GIVDKKNSETE 1573

Query: 3002 NKDSSNKGWSKVNEHSSWENFTTPKTDAQSAWGGGDTQKDAFSGKSR-EDDLSLSASGAQ 3178
            +  ++   W K   ++             +AWG  D     FS K+  E +   +A G++
Sbjct: 1574 SGPAAMGNWDKKKSNTE---------SGPAAWGSTDAAVWGFSDKNNSETESDAAAWGSR 1624

Query: 3179 WEAVKVEPSKASGWHTSGSGGGDSA--DVLGSKETPWEAKVADQETQXXXXXXXXXXXXX 3352
             +      S A+ W + G     +A  D     E PW +                     
Sbjct: 1625 DKKTSETESGAAAWGSWGQPTPTAANEDANEDDENPWVSL-------------------- 1664

Query: 3353 XXLDSESPAGENKESQLNSWGKQSTDSTPAQGWGSSKVDISSENDXXXXXXXXXXXXXXX 3532
                 E+ + +  + +   WG  +     + GW +                         
Sbjct: 1665 ----KETKSRDKDDKERIQWGNPAKKFPSSGGWSNG------------------------ 1696

Query: 3533 XXXXXXXXXXXXXXXXXXXXDGDWKNKRAR----PVDDPNAPVVFTVTRQRLDLFTVEEQ 3700
                                  DWK KR      P  + N   +FT TRQRLD FT EEQ
Sbjct: 1697 -------------------GGADWKGKRNHTPRPPRSEDNLAPMFTATRQRLDSFTSEEQ 1737

Query: 3701 DVLLEIDTIMKNIRKVMHQTGYNDGDPLSTDDQTYIIENVFNHHPDKAAKMGAGIAHIMV 3880
            ++L +++ +M+ +RK+MH + Y DGDP+S DD+T+++E + N HP K  K+G+G+  I V
Sbjct: 1738 ELLSDVEPVMRTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITV 1797

Query: 3881 NRHKEFQDSRCFYAVSVDGVETDFSYRKCLENFIRSKYPDVAEAFLPKYFKKPQPRPGWN 4060
            ++H  F DSRCF+ VS DG + DFSYRK L N++  KYPD AE F+ KYF K  PRP  N
Sbjct: 1798 DKHTIFSDSRCFFVVSTDGAKQDFSYRKSLNNYLMMKYPDRAEEFIDKYFTK--PRPSGN 1855

Query: 4061 RDRG-----PPRSEAGAPRWNRDQTPGPEDATGTPGWSKSEAGTPRWNSDQTPAPDDVST 4225
            RDR      PP  E   P        G +  T T   S+++A        Q+P+     +
Sbjct: 1856 RDRNNQDATPPGEEQSQPPTQSIGNGGDDFNTQTQSPSQTQAQAQAQAQAQSPSQTQTQS 1915

Query: 4226 PGWNTDRTPGPDDASTGWNKSEAGTPGWNTDRT 4324
            P  +  +T  P        +++A +P  +  +T
Sbjct: 1916 PSPSQTQTQSPSQ-----TQAQAQSPSQSPSQT 1943