BLASTX nr result

ID: Scutellaria22_contig00009926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00009926
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138392.1| PREDICTED: transcription elongation factor A...   116   2e-24
ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_002528699.1| transcription elongation factor s-II, putati...   111   7e-23
ref|XP_002272768.1| PREDICTED: transcription elongation factor A...   106   2e-21
ref|XP_003526795.1| PREDICTED: transcription elongation factor A...   104   9e-21

>ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
           [Cucumis sativus]
          Length = 369

 Score =  116 bits (291), Expect = 2e-24
 Identities = 66/161 (40%), Positives = 92/161 (57%), Gaps = 16/161 (9%)
 Frame = +3

Query: 3   DVLKRLKKFPVNYQVLVSTQVGKRLRQLTKHRSDKIKALASDVVEIWKGIIVKETMKNKK 182
           D L++LKKFPV YQ+LVSTQVGKRLR LTKH   KI+  ASD++E+WK I++KET KNKK
Sbjct: 35  DALRQLKKFPVTYQILVSTQVGKRLRHLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKK 94

Query: 183 NGTTEDGDPVRAETSGTETSELKNIQRTNSIKLE---------LNSAT-------XXXXX 314
           NG     D  +  +   E+ +++  Q+++S+K+E          N AT            
Sbjct: 95  NGNASSKDSPKIGSPSAESVKVEKFQKSSSMKVERVSKVEQFDRNGATSSVKYSKSESVV 154

Query: 315 XXXXXXXXXXVDSKVQVEKPSSVAQKPASDPVGPPKLSSMV 437
                      DS V+VE+     +KP+S    PPKL+SM+
Sbjct: 155 SERNSVKVEKTDSMVKVERVVKEEKKPSSGAAAPPKLTSMI 195


>ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|222854232|gb|EEE91779.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/147 (38%), Positives = 94/147 (63%)
 Frame = +3

Query: 3   DVLKRLKKFPVNYQVLVSTQVGKRLRQLTKHRSDKIKALASDVVEIWKGIIVKETMKNKK 182
           D LK+L+KF V  ++LVSTQVGK+LR L KH  +KI+A+ASD++E+WK +++ ET   KK
Sbjct: 36  DSLKQLRKFKVTSELLVSTQVGKKLRPLAKHPKEKIRAVASDLLEMWKKMVIDET--RKK 93

Query: 183 NGTTEDGDPVRAETSGTETSELKNIQRTNSIKLELNSATXXXXXXXXXXXXXXXVDSKVQ 362
           NG+ +    V+AE S +ET +++ +++T+ +K+E  S +               V+   +
Sbjct: 94  NGSIDSKSSVKAEVSKSETVKVEKLRKTSVVKVERASTSETVKVEKMDQDKTVKVEKMSK 153

Query: 363 VEKPSSVAQKPASDPVGPPKLSSMVYC 443
            E  +S  ++P+  P+GPPKL ++V C
Sbjct: 154 QEIQTSSVKQPSQSPIGPPKLKTLVKC 180


>ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
           gi|223531871|gb|EEF33688.1| transcription elongation
           factor s-II, putative [Ricinus communis]
          Length = 342

 Score =  111 bits (277), Expect = 7e-23
 Identities = 58/147 (39%), Positives = 94/147 (63%)
 Frame = +3

Query: 3   DVLKRLKKFPVNYQVLVSTQVGKRLRQLTKHRSDKIKALASDVVEIWKGIIVKETMKNKK 182
           D LK+LK FP++Y +LVS+QVGKRLR LTKH  +KI+ +ASD++E+WK I++ ET + KK
Sbjct: 36  DALKQLKIFPISYDILVSSQVGKRLRPLTKHPREKIQTVASDLLEMWKKIVIDETTR-KK 94

Query: 183 NGTTEDGDPVRAETSGTETSELKNIQRTNSIKLELNSATXXXXXXXXXXXXXXXVDSKVQ 362
           NGT ++   V+AE S  ET +++ +Q+ +++K+E                    V+ K +
Sbjct: 95  NGTVDNKSSVKAEVSKVETIKVEKVQKASTVKVE-----------KIDRERTVKVEKKSE 143

Query: 363 VEKPSSVAQKPASDPVGPPKLSSMVYC 443
            ++ +   +KP+   V PPKL+++V C
Sbjct: 144 EKQQAIDVKKPSQASVTPPKLTAIVKC 170


>ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
           vinifera]
          Length = 367

 Score =  106 bits (264), Expect = 2e-21
 Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 14/161 (8%)
 Frame = +3

Query: 3   DVLKRLKKFPVNYQVLVSTQVGKRLRQLTKHRSDKIKALASDVVEIWKGIIVKETMKNKK 182
           D LK+LK FPV Y+ L STQVGKRLR LTKH   KI++LASD++E+WK +++ ET +NKK
Sbjct: 36  DALKQLKSFPVTYEALASTQVGKRLRHLTKHPKGKIQSLASDLLEMWKKVVIDET-RNKK 94

Query: 183 NGTTEDGDPVRAETSGTETSELKNIQRTNSIKLE--------------LNSATXXXXXXX 320
           NG  ++    +AE S TET +++   +   +K+E                S+T       
Sbjct: 95  NGGLDNNGSAKAEVSKTETVKVEMAHKAGGVKVEKASKVETVKIEKFDRGSSTKPGSVSR 154

Query: 321 XXXXXXXXVDSKVQVEKPSSVAQKPASDPVGPPKLSSMVYC 443
                       V   K  S  +KP     GPPKL++M+ C
Sbjct: 155 SETIKVEKRVENVDERKQFSSVKKPPQASNGPPKLTAMIKC 195


>ref|XP_003526795.1| PREDICTED: transcription elongation factor A protein 2-like
           [Glycine max]
          Length = 367

 Score =  104 bits (259), Expect = 9e-21
 Identities = 61/166 (36%), Positives = 87/166 (52%), Gaps = 21/166 (12%)
 Frame = +3

Query: 3   DVLKRLKKFPVNYQVLVSTQVGKRLRQLTKHRSDKIKALASDVVEIWKGIIVKETMKNKK 182
           D L++LKKFPVNY++LV+TQVGK L+ LTKH   KIK+ A D++EIWKGII+KET KNK 
Sbjct: 33  DALEQLKKFPVNYKILVNTQVGKHLKVLTKHPRQKIKSFAIDLIEIWKGIIIKETSKNKN 92

Query: 183 NGTTEDGDPVRAETSGTETSELKNIQRTNSIKLELNSATXXXXXXXXXXXXXXXVD---- 350
            G+       + E++  E S+   +Q++ S+K+E                     +    
Sbjct: 93  GGSDS-----KDESANREKSKAGKMQKSPSVKIEKGETVKVEKIERNGTSKSSFENMKKV 147

Query: 351 -----------------SKVQVEKPSSVAQKPASDPVGPPKLSSMV 437
                             K+  EKP S A+K +S    PPKL +M+
Sbjct: 148 QNDVKNERTDRAASVKMEKIAEEKPISGAKKMSSSSTAPPKLKTMI 193


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