BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00009739
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    48   1e-14
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-...    37   7e-06
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]      36   9e-06

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 47.8 bits (112), Expect(4) = 1e-14
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -1

Query: 92   VHYERTKHIDVRYHFLRSNQGRIKVKK 12
            VH+ERTKHIDVRYHFLRS + RIKVKK
Sbjct: 1250 VHHERTKHIDVRYHFLRSEK-RIKVKK 1275



 Score = 41.6 bits (96), Expect(4) = 1e-14
 Identities = 23/37 (62%), Positives = 25/37 (67%)
 Frame = -3

Query: 255  GGFVASQKATLQPILTLSTR*V*CITLIEAAK*GIWL 145
            GG V S KATLQP +TLST     + L EAAK GIWL
Sbjct: 1183 GGSVVSWKATLQPTVTLSTTEAEYMALTEAAKEGIWL 1219



 Score = 32.0 bits (71), Expect(4) = 1e-14
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -1

Query: 320  GYGDSNYAGDVRSGKSMTNY 261
            GY DS+YAGDV + +SMT Y
Sbjct: 1159 GYSDSDYAGDVDTRRSMTGY 1178



 Score = 21.6 bits (44), Expect(4) = 1e-14
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 142  LKGLVNELCPPHDYTTMF 89
            LKGLV++L   HD  T++
Sbjct: 1219 LKGLVSDLGLHHDQATVY 1236


>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549746|gb|ABA92543.1|
            retrotransposon protein, putative, Ty1-copia subclass,
            expressed [Oryza sativa Japonica Group]
          Length = 1170

 Score = 36.6 bits (83), Expect(3) = 7e-06
 Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 2/27 (7%)
 Frame = -1

Query: 86   YERTKHIDVRYHFLRS--NQGRIKVKK 12
            +ERTKHID+RYHF+R    +G +KV K
Sbjct: 1113 HERTKHIDLRYHFIRGVITEGEVKVCK 1139



 Score = 28.9 bits (63), Expect(3) = 7e-06
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -3

Query: 255  GGFVASQKATLQPILTLSTR*V*CITLIEAAK*GIWL 145
            GG   S K +LQ I+ LST     + + EA K  IWL
Sbjct: 1044 GGCAVSWKTSLQAIVALSTTEAEYMAISEACKEAIWL 1080



 Score = 28.1 bits (61), Expect(3) = 7e-06
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 320  GYGDSNYAGDVRSGKSMTNYFLVV 249
            GY DS++AGD+   +S+T+Y   +
Sbjct: 1020 GYVDSDFAGDLNRRRSLTDYVFTI 1043


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score = 36.2 bits (82), Expect(3) = 9e-06
 Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 2/27 (7%)
 Frame = -1

Query: 86   YERTKHIDVRYHFLRS--NQGRIKVKK 12
            +ERTKHIDVRYHF+R    +G +KV K
Sbjct: 1154 HERTKHIDVRYHFIRGVIAEGDVKVCK 1180



 Score = 30.0 bits (66), Expect(3) = 9e-06
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -3

Query: 255  GGFVASQKATLQPILTLSTR*V*CITLIEAAK*GIWL 145
            GG   S KA+LQ  + LST  V  + + EA K  IWL
Sbjct: 1085 GGCAVSWKASLQATVALSTTEVEYMAISEACKEAIWL 1121



 Score = 26.9 bits (58), Expect(3) = 9e-06
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 320  GYGDSNYAGDVRSGKSMTNYFLVV 249
            GY DS++AGD+   +S+T Y   +
Sbjct: 1061 GYVDSDFAGDLDRRRSLTGYVFTI 1084