BLASTX nr result

ID: Scutellaria22_contig00009364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00009364
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002868689.1| GTP binding protein [Arabidopsis lyrata subs...    73   2e-11
ref|NP_198806.2| Small GTP-binding protein [Arabidopsis thaliana...    72   6e-11
emb|CBI22168.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002277245.1| PREDICTED: translation factor GUF1 homolog, ...    60   2e-07
ref|XP_003533605.1| PREDICTED: translation factor GUF1 homolog, ...    58   9e-07

>ref|XP_002868689.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314525|gb|EFH44948.1| GTP binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 663

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/87 (45%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
 Frame = -3

Query: 253 MSSLHRASKALKSQRILFNLVSSNYKCSRLGLVSYSNSILGWNQCAFFASHFRE---DPS 83
           M S++RASK LKS R  F+++ ++ K +R      + + +G  Q   F+S  R+   +P+
Sbjct: 1   MGSMYRASKTLKSSRQAFSILFNSLKSNR-----QTPTCIGLYQAYGFSSDSRQSSKEPT 55

Query: 82  IDLNQYPSDNIRNFSIIAHVDHGKSTL 2
           IDL ++PS+ IRNFSIIAH+DHGKSTL
Sbjct: 56  IDLTKFPSEKIRNFSIIAHIDHGKSTL 82


>ref|NP_198806.2| Small GTP-binding protein [Arabidopsis thaliana]
           gi|75171453|sp|Q9FLE4.1|GUF1_ARATH RecName:
           Full=Translation factor GUF1 homolog, mitochondrial;
           AltName: Full=Elongation factor 4 homolog; Short=EF-4;
           AltName: Full=GTPase GUF1 homolog; AltName:
           Full=Ribosomal back-translocase; Flags: Precursor
           gi|10176983|dbj|BAB10215.1| GTP-binding membrane protein
           LepA homolog [Arabidopsis thaliana]
           gi|56461750|gb|AAV91331.1| At5g39900 [Arabidopsis
           thaliana] gi|56790232|gb|AAW30033.1| At5g39900
           [Arabidopsis thaliana] gi|332007106|gb|AED94489.1| Small
           GTP-binding protein [Arabidopsis thaliana]
          Length = 663

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
 Frame = -3

Query: 253 MSSLHRASKALKSQR----ILFNLVSSNYKCSRLGLVSYSNSILGWNQCAFFASHFRE-- 92
           M S++RASK LKS R    ILFN ++SN +         + + +G  Q   F+S  R+  
Sbjct: 1   MGSMYRASKTLKSSRQALSILFNSLNSNRQ---------NPTCIGLYQAYGFSSDSRQSS 51

Query: 91  -DPSIDLNQYPSDNIRNFSIIAHVDHGKSTL 2
            +P+IDL ++PS+ IRNFSIIAH+DHGKSTL
Sbjct: 52  KEPTIDLTKFPSEKIRNFSIIAHIDHGKSTL 82


>emb|CBI22168.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
 Frame = -3

Query: 253 MSSLHRASKALKSQRILFNLVSSNYKCSRLGLVSYSNSILGWNQ--CAFFASHFREDPSI 80
           M  L+ ASK LKS + L  L+         GL+ + +   GW+   C+    + R D S+
Sbjct: 1   MGYLNGASKTLKSPKYLSLLLK--------GLLGWHH--FGWSHTFCSRSLQNSR-DSSV 49

Query: 79  DLNQYPSDNIRNFSIIAHVDHGKSTL 2
           DL+QYP + IRNFSIIAHVDHGKSTL
Sbjct: 50  DLSQYPPERIRNFSIIAHVDHGKSTL 75


>ref|XP_002277245.1| PREDICTED: translation factor GUF1 homolog, mitochondrial [Vitis
           vinifera]
          Length = 681

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/94 (44%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
 Frame = -3

Query: 253 MSSLHRASKALKSQRILFNLVSSNYKC-SRLGLVSYSNSI---LGWNQCAF---FASHFR 95
           M  L+ ASK LKS + L  L        S    V+  N +   LGW+   +   F S   
Sbjct: 1   MGYLNGASKTLKSPKYLSLLCRHRSSAFSPFSPVTGCNPVKGLLGWHHFGWSHTFCSRSL 60

Query: 94  E---DPSIDLNQYPSDNIRNFSIIAHVDHGKSTL 2
           +   D S+DL+QYP + IRNFSIIAHVDHGKSTL
Sbjct: 61  QNSRDSSVDLSQYPPERIRNFSIIAHVDHGKSTL 94


>ref|XP_003533605.1| PREDICTED: translation factor GUF1 homolog, mitochondrial-like
           [Glycine max]
          Length = 675

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
 Frame = -3

Query: 253 MSSLHRASKALKSQRILFNLVSSNYKCSRLG--LVSYSNSILGWNQCAFFA--SHFREDP 86
           M  L +ASK L+    L  L +SN+  + L   +     S+     C+     S  RE  
Sbjct: 1   MGYLSKASKTLRQSNYLSLLCNSNFNFNPLTNRITHERFSVTRALLCSQTRQNSTTREKS 60

Query: 85  SIDLNQYPSDNIRNFSIIAHVDHGKSTL 2
           +IDL+QYP + +RNFSIIAHVDHGKSTL
Sbjct: 61  TIDLSQYPKELVRNFSIIAHVDHGKSTL 88


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