BLASTX nr result

ID: Scutellaria22_contig00008982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00008982
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90572.1| ribosomal protein L32 [Solanum tuberosum]              100   2e-19
dbj|BAG80685.1| ribosomal protein L32 [Populus alba]                   95   5e-18
gb|AAF87043.1|AC006535_21 T24P13.12 [Arabidopsis thaliana]             94   9e-18
ref|NP_564259.1| ribosomal L.2-like protein [Arabidopsis thalian...    94   9e-18
ref|XP_002316112.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17

>gb|AFW90572.1| ribosomal protein L32 [Solanum tuberosum]
          Length = 132

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/86 (58%), Positives = 65/86 (75%)
 Frame = +1

Query: 13  RRLAHSLAQPAPLGTAINHQINNSLPPFVLPEDHEDNNWSIEKPDSPFFGGAMELMAVPK 192
           RR  H  ++PAPL + ++ ++  + P  VLPE+  ++N     P+SPF  G+MELMAVPK
Sbjct: 22  RRFIHITSRPAPLDSVVD-RLTATSPSLVLPENENNSNMF---PNSPFNWGSMELMAVPK 77

Query: 193 RKVTPHKRGIRNGPKALKPVPVIIRC 270
           +KV+PHKRGIRNGPKALKPVPVIIRC
Sbjct: 78  KKVSPHKRGIRNGPKALKPVPVIIRC 103


>dbj|BAG80685.1| ribosomal protein L32 [Populus alba]
          Length = 138

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 52/94 (55%), Positives = 60/94 (63%), Gaps = 6/94 (6%)
 Frame = +1

Query: 7   GFRRLAHSLAQPAPLGTAINHQINNSLPPFVLPEDHEDNNWSIEKPDSPF------FGGA 168
           G R+  H +A   PL  A+   I  + P F LPE   + + S    D  F      FGG+
Sbjct: 21  GIRKWTHVVAMAPPLDGALESSI--AAPQFTLPEFDANQDTSKNSSDFGFTFPGFSFGGS 78

Query: 169 MELMAVPKRKVTPHKRGIRNGPKALKPVPVIIRC 270
           MELMAVPKRKVTPHKRGIRNGPKALKP+PVIIRC
Sbjct: 79  MELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRC 112


>gb|AAF87043.1|AC006535_21 T24P13.12 [Arabidopsis thaliana]
          Length = 235

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 6/92 (6%)
 Frame = +1

Query: 13  RRLAHSLAQPAPLGTAINHQINNSLPPFVLPEDHEDNNWSIEKPDSPF------FGGAME 174
           R L+H  A P+PL  A +  I  S+PP VLPE  ++    IE+    F      F G+ME
Sbjct: 136 RSLSHVAAMPSPLNGAFDRPI--SMPPLVLPEFDQNQPGLIEEKSFGFGLPSFAFNGSME 193

Query: 175 LMAVPKRKVTPHKRGIRNGPKALKPVPVIIRC 270
           LMAVPK+K++ HKRGIRNGPKALKPVPVIIRC
Sbjct: 194 LMAVPKKKISKHKRGIRNGPKALKPVPVIIRC 225


>ref|NP_564259.1| ribosomal L.2-like protein [Arabidopsis thaliana]
           gi|16226298|gb|AAL16127.1|AF428295_1 At1g26740/T24P13_11
           [Arabidopsis thaliana] gi|23308289|gb|AAN18114.1|
           At1g26740/T24P13_11 [Arabidopsis thaliana]
           gi|332192605|gb|AEE30726.1| ribosomal L.2-like protein
           [Arabidopsis thaliana]
          Length = 134

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 6/92 (6%)
 Frame = +1

Query: 13  RRLAHSLAQPAPLGTAINHQINNSLPPFVLPEDHEDNNWSIEKPDSPF------FGGAME 174
           R L+H  A P+PL  A +  I  S+PP VLPE  ++    IE+    F      F G+ME
Sbjct: 22  RSLSHVAAMPSPLNGAFDRPI--SMPPLVLPEFDQNQPGLIEEKSFGFGLPSFAFNGSME 79

Query: 175 LMAVPKRKVTPHKRGIRNGPKALKPVPVIIRC 270
           LMAVPK+K++ HKRGIRNGPKALKPVPVIIRC
Sbjct: 80  LMAVPKKKISKHKRGIRNGPKALKPVPVIIRC 111


>ref|XP_002316112.1| predicted protein [Populus trichocarpa]
           gi|224112197|ref|XP_002316116.1| predicted protein
           [Populus trichocarpa] gi|222865152|gb|EEF02283.1|
           predicted protein [Populus trichocarpa]
           gi|222865156|gb|EEF02287.1| predicted protein [Populus
           trichocarpa]
          Length = 138

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 52/94 (55%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
 Frame = +1

Query: 7   GFRRLAHSLAQPAPLGTAINHQINNSLPPFVLPEDHEDNNWSIEKPDSPF------FGGA 168
           G R+  H +A   PL  A+   I +  P F LPE   + + S    D  F      FGG+
Sbjct: 21  GIRKWTHVVAMAPPLDGALESSIAS--PQFTLPEFDANQDTSNNSSDFGFTFPGFSFGGS 78

Query: 169 MELMAVPKRKVTPHKRGIRNGPKALKPVPVIIRC 270
           MELMAVPKRKVTPHKRGIRNGPKALKP PVIIRC
Sbjct: 79  MELMAVPKRKVTPHKRGIRNGPKALKPTPVIIRC 112


Top