BLASTX nr result

ID: Scutellaria22_contig00008776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00008776
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37781.1| unknown [Lotus japonicus]                               69   3e-11
ref|XP_003612650.1| F-box family protein [Medicago truncatula] g...    66   5e-11
ref|XP_003612646.1| F-box family protein [Medicago truncatula] g...    66   8e-11
ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-10
ref|XP_002330355.1| predicted protein [Populus trichocarpa] gi|2...    61   7e-10

>gb|AFK37781.1| unknown [Lotus japonicus]
          Length = 489

 Score = 68.6 bits (166), Expect(2) = 3e-11
 Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
 Frame = +3

Query: 177 LNGNLHWLAYNSEGVPLISCLDLETELFSSCPSPPC-ERRAPSSWRLFAFEDCLCVCNLK 353
           ++G LHW+  +  G   I C D E+E F S P+PPC  +    S  +      L +C+  
Sbjct: 285 VSGALHWIG-SYHGTLSILCFDFESERFRSFPTPPCLYQSCTESITMGELRGSLYICDSF 343

Query: 354 SSGD-IVVWLMKEYGDGRSWTKEFTVSNIPDFANKTCDVVRPIKVFKGGDVLMVWEKH 524
           S G   V+W+MKEYG   SWTK F+   +  +      +  P+K FK G  ++++  +
Sbjct: 344 SKGTPFVMWIMKEYGFKESWTKIFSFDTMSSYRWPFGGLYWPVKHFKNGSAILMYHSY 401



 Score = 25.4 bits (54), Expect(2) = 3e-11
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = +2

Query: 89  EVYTLGIGSWRSIELDT 139
           EV+TLG  +WR++E+++
Sbjct: 257 EVHTLGTSTWRNVEVNS 273


>ref|XP_003612650.1| F-box family protein [Medicago truncatula]
           gi|355513985|gb|AES95608.1| F-box family protein
           [Medicago truncatula]
          Length = 441

 Score = 65.9 bits (159), Expect(2) = 5e-11
 Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
 Frame = +3

Query: 177 LNGNLHWLAYNSEG-VPLISCLDLETELFSSCPSPPCERRAPSSWRLFAFEDCLCVCNLK 353
           +NG LHW+ Y+ +     I C + E+E F S PSPP       S  +   +  L +C   
Sbjct: 250 VNGALHWINYDDKNKTRSILCFNFESEKFQSFPSPPHPHHKRLSITMVELKGFLYICE-S 308

Query: 354 SSGDIVVWLMKEYGDGRSWTKEFTVSNIPDFANKTCDVVRPIKVFK-GGDVLMV 512
           +    VVWLMK+YG G SWT+ F   N          + RP+K F+ GG  L++
Sbjct: 309 TVNSCVVWLMKKYGIGESWTRVFCSDNFNGIP-LCFGLCRPVKHFENGGGALLI 361



 Score = 27.3 bits (59), Expect(2) = 5e-11
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +2

Query: 5   QHKVVKFNRECIGDQDTPKWKRFTDYDC-EVYTLGIGSWRSIELD 136
           ++KV++  + C G      W   +D    E++TLG  +WR++E+D
Sbjct: 198 EYKVIRMWKRCDG------WCYKSDVMVVEMHTLGTATWRNVEVD 236


>ref|XP_003612646.1| F-box family protein [Medicago truncatula]
           gi|355513981|gb|AES95604.1| F-box family protein
           [Medicago truncatula]
          Length = 441

 Score = 65.9 bits (159), Expect(2) = 8e-11
 Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
 Frame = +3

Query: 177 LNGNLHWLAYNSEG-VPLISCLDLETELFSSCPSPPCERRAPSSWRLFAFEDCLCVCNLK 353
           +NG LHW+ Y+ +     I C + E+E F S PSPP       S  +   +  L +C   
Sbjct: 250 VNGALHWINYDDKNKTRSILCFNFESEKFQSFPSPPHPHHKRLSITMVELKGFLYICE-S 308

Query: 354 SSGDIVVWLMKEYGDGRSWTKEFTVSNIPDFANKTCDVVRPIKVFK-GGDVLMV 512
           +    VVWLMK+YG G SWT+ F   N          + RP+K F+ GG  L++
Sbjct: 309 TVNSCVVWLMKKYGIGESWTRVFCSDNFNGIP-LCFGLCRPVKHFENGGGALLI 361



 Score = 26.6 bits (57), Expect(2) = 8e-11
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +2

Query: 5   QHKVVKFNRECIGDQDTPKWKRFTDYDC-EVYTLGIGSWRSIELD 136
           ++KV++  + C G      W   +D    E++TLG  +WR++E+D
Sbjct: 198 EYKVIRMWKRCDG------WCYKSDVMVVEMHTLGTTTWRNVEVD 236


>ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
 Frame = +3

Query: 168 GVFLNGNLHWLAY--NSEGVPLISCLDLETELFSSCPSPPCERRAPSSWRLFAFEDCLCV 341
           GV LNG LHW+    + E   LI  LD++++       P   RR  +   L    DCL +
Sbjct: 236 GVSLNGALHWILNLDDYEDADLICALDIDSKKIRPMSPPNGFRRDTTEMTLGVLRDCLFI 295

Query: 342 CNLKSSGDIVVWLMKEYGDGRSWTKEFTVSNIPDFANKTCDVVRPIKVFKGGDVLMVWEK 521
           C+  +  ++ +W+MKEYG   SWTKE  ++     +N     ++PI V K G+VL+  + 
Sbjct: 296 CDSMTLYNLDIWVMKEYGVKDSWTKEIVIAKTSLPSNLQNSFLQPIMVSKDGEVLISSDS 355

Query: 522 HFLLLLQND*NHTKN*YDSGTCSWSYGHFPSHL 620
           +  +            YD G+ S++    PS +
Sbjct: 356 NVFVW-----------YDPGSKSFTKVTLPSRV 377


>ref|XP_002330355.1| predicted protein [Populus trichocarpa] gi|222871559|gb|EEF08690.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 61.2 bits (147), Expect(2) = 7e-10
 Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
 Frame = +3

Query: 174 FLNGNLHW-LAYNSEGVPLISCLDLETELFSSCPSPPCERRAPSSWRLFAFEDCLCVCNL 350
           F+ G++HW L    + V  I   + E E FS    PP  R       L AFE CL V   
Sbjct: 198 FVCGSIHWELRDEDDCVNSIGSFNFENEQFSELSLPP--RYDEGDVTLTAFEGCLGVSFF 255

Query: 351 KSSGD--IVVWLMKEYGDGRSWTKEFTVSNIPDFANKTCDVVRPIKVFKGGDVLMVWEKH 524
            +  D    +W+MKEYG+  SWTK+FTV N+  FA     +  P+     G +LM+  + 
Sbjct: 256 HTYSDPQYEIWIMKEYGNKESWTKQFTVKNL-GFAK----LYDPLIFLNNGLILMMQYRE 310

Query: 525 FLL 533
           F++
Sbjct: 311 FVV 313



 Score = 28.1 bits (61), Expect(2) = 7e-10
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 83  DCEVYTLGIGSWRSIE 130
           + E+YT+G G WRSI+
Sbjct: 169 EAEIYTIGTGKWRSIQ 184


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