BLASTX nr result
ID: Scutellaria22_contig00008359
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria22_contig00008359
(561 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511070.1| pentatricopeptide repeat-containing protein,... 163 1e-44
ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 166 9e-44
ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|2... 164 3e-43
ref|NP_200988.1| pentatricopeptide repeat-containing protein [Ar... 148 4e-40
ref|XP_002866455.1| hypothetical protein ARALYDRAFT_496347 [Arab... 148 9e-40
>ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550185|gb|EEF51672.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 551
Score = 163 bits (412), Expect(2) = 1e-44
Identities = 84/155 (54%), Positives = 113/155 (72%)
Frame = +2
Query: 95 VAELAFICEAQSLKFGFFADVFVCNTLSCVYCRGGDVDGAKGVFEGTLFKDVVSYNVMID 274
V LA +Q KFGF +D++V N+L VY ++ A VF+ + +DVVSYN ++D
Sbjct: 152 VLSLAQCLHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVVSYNALVD 211
Query: 275 GFVKAGEIDHARELFDEMPQRDAVSWGTLLAGYAKSSRCLEAIDLFDCMVDSKVKFDNVA 454
GFVKAGE ARE+FD MP RD+VSWG+L+AGYA+ S C EAI LFD M+ K++ DN+A
Sbjct: 212 GFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDLMMGLKLEPDNIA 271
Query: 455 LVSALSACAQLGKVEKGRKIHSYIETKGMRLDSYL 559
LVSALSACAQLG++EKG++IH YI+ ++ DS+L
Sbjct: 272 LVSALSACAQLGELEKGKQIHDYIKKNRIQADSFL 306
Score = 42.0 bits (97), Expect(2) = 1e-44
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 6 TALNFFAQMRRKSVSPDFRTFPLVLKAC 89
+AL+FF QMRR SV PDF ++P LKAC
Sbjct: 120 SALHFFLQMRRFSVPPDFHSYPFALKAC 147
>ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 166 bits (420), Expect(2) = 9e-44
Identities = 91/168 (54%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Frame = +2
Query: 65 FPSC--S*SLWVVAELAFICEAQSLKFGFFADVFVCNTLSCVYCRGGDVDGAKGVFEGTL 238
FP C + SL LA +Q+ KFGF AD+FVCNTL VY + A VF T
Sbjct: 132 FPFCLKACSLLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETS 191
Query: 239 FKDVVSYNVMIDGFVKAGEIDHARELFDEMPQRDAVSWGTLLAGYAKS-SRCLEAIDLFD 415
KDVVSYN +I GF+K G+ D AR LFD+MP RDAVSWGTLLAGYA+S C++AI LF+
Sbjct: 192 LKDVVSYNALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFN 251
Query: 416 CMVDSKVKFDNVALVSALSACAQLGKVEKGRKIHSYIETKGMRLDSYL 559
M+ S V+ DN+ALVSALSACAQLG++E+G+ IH YI+ + ++++L
Sbjct: 252 RMLISTVRPDNIALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFL 299
Score = 36.2 bits (82), Expect(2) = 9e-44
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +3
Query: 9 ALNFFAQMRRKSVSPDFRTFPLVLKAC 89
AL F +MRR SV PD TFP LKAC
Sbjct: 113 ALVIFVRMRRLSVPPDTHTFPFCLKAC 139
>ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|222858859|gb|EEE96406.1|
predicted protein [Populus trichocarpa]
Length = 537
Score = 164 bits (415), Expect(2) = 3e-43
Identities = 83/145 (57%), Positives = 109/145 (75%)
Frame = +2
Query: 125 QSLKFGFFADVFVCNTLSCVYCRGGDVDGAKGVFEGTLFKDVVSYNVMIDGFVKAGEIDH 304
Q LKFGF +D++V N+L Y + A VF+ + +DVVSYNV+IDGFVKAG++
Sbjct: 149 QVLKFGFLSDLYVMNSLIHGYMVSDMSNDAYKVFDESPQRDVVSYNVLIDGFVKAGDVVK 208
Query: 305 ARELFDEMPQRDAVSWGTLLAGYAKSSRCLEAIDLFDCMVDSKVKFDNVALVSALSACAQ 484
ARELFD MP RD+VSW T++AG AK C EAI+LFD M+D +++ DNVALVS LSACAQ
Sbjct: 209 ARELFDLMPVRDSVSWNTIIAGCAKGDYCEEAIELFDFMMDLEIRPDNVALVSTLSACAQ 268
Query: 485 LGKVEKGRKIHSYIETKGMRLDSYL 559
LG++EKG+KIH YIE M++D++L
Sbjct: 269 LGELEKGKKIHDYIERNAMKVDTFL 293
Score = 36.6 bits (83), Expect(2) = 3e-43
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3
Query: 9 ALNFFAQMRRKSVSPDFRTFPLVLKAC 89
AL+FF QMRR SV D +FP LKAC
Sbjct: 108 ALHFFTQMRRLSVPLDSHSFPFTLKAC 134
>ref|NP_200988.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171532|sp|Q9FLS9.1|PP441_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g61800 gi|10176873|dbj|BAB10080.1| unnamed protein
product [Arabidopsis thaliana]
gi|332010136|gb|AED97519.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 499
Score = 148 bits (373), Expect(2) = 4e-40
Identities = 77/145 (53%), Positives = 100/145 (68%)
Frame = +2
Query: 125 QSLKFGFFADVFVCNTLSCVYCRGGDVDGAKGVFEGTLFKDVVSYNVMIDGFVKAGEIDH 304
Q+L+FG +D+F NTL VY +D A +F+ +DVV+YNV+IDG VKA EI
Sbjct: 142 QALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVR 201
Query: 305 ARELFDEMPQRDAVSWGTLLAGYAKSSRCLEAIDLFDCMVDSKVKFDNVALVSALSACAQ 484
ARELFD MP RD VSW +L++GYA+ + C EAI LFD MV +K DNVA+VS LSACAQ
Sbjct: 202 ARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ 261
Query: 485 LGKVEKGRKIHSYIETKGMRLDSYL 559
G +KG+ IH Y + K + +DS+L
Sbjct: 262 SGDWQKGKAIHDYTKRKRLFIDSFL 286
Score = 42.0 bits (97), Expect(2) = 4e-40
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3
Query: 18 FFAQMRRKSVSPDFRTFPLVLKAC 89
FF +MRR+SV PDF TFP V KAC
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKAC 125
Score = 56.6 bits (135), Expect = 3e-06
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Frame = +2
Query: 152 DVFVCNTLSCVYCRGGDVDGAKGVFEGT----LFKDVVSYNVMIDGFVKAGEIDHARELF 319
+V + +TLS + GD K + + T LF D ++D + K G ID A E+F
Sbjct: 249 NVAIVSTLSAC-AQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIF 307
Query: 320 DEMPQRDAVSWGTLLAGYAKSSRCLEAIDLFDCMVDSKVKFDNVALVSALSACAQLGKVE 499
+ + +W ++ G A +D F MV S +K D V +S L C+ G V+
Sbjct: 308 ELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVD 367
Query: 500 KGRKI 514
+ R +
Sbjct: 368 EARNL 372
>ref|XP_002866455.1| hypothetical protein ARALYDRAFT_496347 [Arabidopsis lyrata subsp.
lyrata] gi|297312290|gb|EFH42714.1| hypothetical protein
ARALYDRAFT_496347 [Arabidopsis lyrata subsp. lyrata]
Length = 1401
Score = 148 bits (373), Expect(2) = 9e-40
Identities = 76/145 (52%), Positives = 100/145 (68%)
Frame = +2
Query: 125 QSLKFGFFADVFVCNTLSCVYCRGGDVDGAKGVFEGTLFKDVVSYNVMIDGFVKAGEIDH 304
Q+L+FG +D+F NTL Y + A +F+ +DVV+YNV+IDG VKA EI
Sbjct: 556 QALRFGLLSDLFTLNTLIRAYSLMAPIGSALQLFDENPQRDVVTYNVLIDGLVKACEIVR 615
Query: 305 ARELFDEMPQRDAVSWGTLLAGYAKSSRCLEAIDLFDCMVDSKVKFDNVALVSALSACAQ 484
ARELFD MP RD VSW +L+AGYA+ ++C EAI LFD M+ +K DNVA+VS LSACAQ
Sbjct: 616 ARELFDSMPFRDLVSWNSLIAGYAQMNQCREAISLFDEMIGLGLKPDNVAIVSTLSACAQ 675
Query: 485 LGKVEKGRKIHSYIETKGMRLDSYL 559
G +EKG+ IH Y + K + +DS+L
Sbjct: 676 SGDLEKGKAIHDYTKKKRLFIDSFL 700
Score = 40.8 bits (94), Expect(2) = 9e-40
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3
Query: 18 FFAQMRRKSVSPDFRTFPLVLKAC 89
FF +MRR+SV PDF T+P V KAC
Sbjct: 516 FFVEMRRRSVPPDFHTYPFVFKAC 539
Score = 58.9 bits (141), Expect = 5e-07
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Frame = +2
Query: 152 DVFVCNTLSCVYCRGGDVDGAKGVFEGT----LFKDVVSYNVMIDGFVKAGEIDHARELF 319
+V + +TLS + GD++ K + + T LF D ++D + K G ID A E+F
Sbjct: 663 NVAIVSTLSAC-AQSGDLEKGKAIHDYTKKKRLFIDSFLATGLVDFYAKCGFIDTAMEIF 721
Query: 320 DEMPQRDAVSWGTLLAGYAKSSRCLEAIDLFDCMVDSKVKFDNVALVSALSACAQLGKVE 499
+ +W ++ G A +D F MV S +K D V+ +S L C+ G V
Sbjct: 722 HLSSDKTLFTWNAMITGLAMHGNGELTVDYFHKMVSSGIKPDGVSFISVLVGCSHSGLVG 781
Query: 500 KGRKI 514
+ RK+
Sbjct: 782 EARKL 786