BLASTX nr result

ID: Scutellaria22_contig00008356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00008356
         (1320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi...   431   e-118
emb|CBI37850.3| unnamed protein product [Vitis vinifera]              431   e-118
ref|XP_002306193.1| predicted protein [Populus trichocarpa] gi|2...   420   e-115
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]...   406   e-111
ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glyc...   396   e-108

>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
          Length = 609

 Score =  431 bits (1109), Expect = e-118
 Identities = 224/331 (67%), Positives = 260/331 (78%), Gaps = 33/331 (9%)
 Frame = -1

Query: 1320 ALSGQPLLGHPVMVKPSEAEKNLVQSTSAASGG---LLGPYSGGARRLYVGNLPATIKED 1150
            ALSGQPLLG PVMVKPSEAEKNLVQST+AA+GG   L+GPYSGGARRLYVGNL   I ED
Sbjct: 278  ALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYSGGARRLYVGNLHFNITED 337

Query: 1149 QLRQVFEPFGIVELVQMPSDPGSGNCKGYAFIQFARLDDAKAAQNLNGQLEIAGRVIKVS 970
            QLRQVFEPFG VELVQ+P+D  +G+CKG+ F+QFARL+DA+AAQ+LNGQL+IAGR IKVS
Sbjct: 338  QLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQSLNGQLDIAGRTIKVS 397

Query: 969  AVTDQAGMQEAGANLADFDDDEGNGLSLNAQSRALLMQKLDRTGTASSFTG--------- 817
             VTDQAG+Q+ GAN  DFDDDEG GLSLNA+SRA+LMQKLDR+GT     G         
Sbjct: 398  VVTDQAGLQDIGANAGDFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNN 457

Query: 816  -------ASVLG-------------QTSGQVLPGLPSAGLSIPALSGPSIDTIGVPSECL 697
                   A +LG             Q     L GLP AGL +PA++ PSIDTIGVPSECL
Sbjct: 458  PGLPLSTAPILGAAPVVSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECL 517

Query: 696  LLKNMFDQNVE-EPDFDLDIKEDVQDEVSKYGRIKHIHVEKNSAGFVYLRFDNTESAVAA 520
            +LKNMFD  +E EPDFDLDIKEDVQDE SK+G +KHI+V+KNSAGFV+LRF+NT++A++A
Sbjct: 518  MLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHIYVDKNSAGFVFLRFENTQAAISA 577

Query: 519  QHALHGRWFAAKMITATFMLPSDYDAKFPGS 427
            Q ALHGRWFA KMITATFMLP +Y+AKFP S
Sbjct: 578  QRALHGRWFAGKMITATFMLPQNYEAKFPDS 608


>emb|CBI37850.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  431 bits (1109), Expect = e-118
 Identities = 224/331 (67%), Positives = 260/331 (78%), Gaps = 33/331 (9%)
 Frame = -1

Query: 1320 ALSGQPLLGHPVMVKPSEAEKNLVQSTSAASGG---LLGPYSGGARRLYVGNLPATIKED 1150
            ALSGQPLLG PVMVKPSEAEKNLVQST+AA+GG   L+GPYSGGARRLYVGNL   I ED
Sbjct: 96   ALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYSGGARRLYVGNLHFNITED 155

Query: 1149 QLRQVFEPFGIVELVQMPSDPGSGNCKGYAFIQFARLDDAKAAQNLNGQLEIAGRVIKVS 970
            QLRQVFEPFG VELVQ+P+D  +G+CKG+ F+QFARL+DA+AAQ+LNGQL+IAGR IKVS
Sbjct: 156  QLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQSLNGQLDIAGRTIKVS 215

Query: 969  AVTDQAGMQEAGANLADFDDDEGNGLSLNAQSRALLMQKLDRTGTASSFTG--------- 817
             VTDQAG+Q+ GAN  DFDDDEG GLSLNA+SRA+LMQKLDR+GT     G         
Sbjct: 216  VVTDQAGLQDIGANAGDFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNN 275

Query: 816  -------ASVLG-------------QTSGQVLPGLPSAGLSIPALSGPSIDTIGVPSECL 697
                   A +LG             Q     L GLP AGL +PA++ PSIDTIGVPSECL
Sbjct: 276  PGLPLSTAPILGAAPVVSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECL 335

Query: 696  LLKNMFDQNVE-EPDFDLDIKEDVQDEVSKYGRIKHIHVEKNSAGFVYLRFDNTESAVAA 520
            +LKNMFD  +E EPDFDLDIKEDVQDE SK+G +KHI+V+KNSAGFV+LRF+NT++A++A
Sbjct: 336  MLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHIYVDKNSAGFVFLRFENTQAAISA 395

Query: 519  QHALHGRWFAAKMITATFMLPSDYDAKFPGS 427
            Q ALHGRWFA KMITATFMLP +Y+AKFP S
Sbjct: 396  QRALHGRWFAGKMITATFMLPQNYEAKFPDS 426


>ref|XP_002306193.1| predicted protein [Populus trichocarpa] gi|222849157|gb|EEE86704.1|
            predicted protein [Populus trichocarpa]
          Length = 348

 Score =  420 bits (1079), Expect = e-115
 Identities = 221/322 (68%), Positives = 254/322 (78%), Gaps = 24/322 (7%)
 Frame = -1

Query: 1320 ALSGQPLLGHPVMVKPSEAEKNLVQSTSAA-SGGLLGPYSGGARRLYVGNLPATIKEDQL 1144
            ALSGQ LLG PVMVKPSEAEKNLVQST+A  SGGL GPYSGGARRLYVGNL   I EDQL
Sbjct: 27   ALSGQLLLGQPVMVKPSEAEKNLVQSTTAVTSGGLTGPYSGGARRLYVGNLHFNITEDQL 86

Query: 1143 RQVFEPFGIVELVQMPSDPGSGNCKGYAFIQFARLDDAKAAQNLNGQLEIAGRVIKVSAV 964
            RQVFEPFG VELVQ+P D  SG+CKG+ F+QFARL+DA+ A NLNGQ+EIAGR IKVSAV
Sbjct: 87   RQVFEPFGAVELVQLPHDE-SGHCKGFGFVQFARLEDARNALNLNGQVEIAGRPIKVSAV 145

Query: 963  TDQAGMQEAGANLADFDDDEGNGLSLNAQSRALLMQKLDRTGTASSFTG---------AS 811
            TDQ G Q+ G N+ DFDDDEG GL+LNA+SRALLMQKLDRTGTASS  G         A 
Sbjct: 146  TDQTGTQDGGTNVGDFDDDEGGGLALNARSRALLMQKLDRTGTASSIAGSLGTPTLPTAP 205

Query: 810  VLGQT-----------SGQV--LPGLPSAGLSIPALSGPSIDTIGVPSECLLLKNMFDQN 670
            +LG T           SG V  +PGLP  GL +PA + P++DTIGVPS+CL LKNMFD  
Sbjct: 206  ILGATPVVSPAVAPLLSGSVPAIPGLPVPGLQLPATAIPTMDTIGVPSDCLFLKNMFDPK 265

Query: 669  VE-EPDFDLDIKEDVQDEVSKYGRIKHIHVEKNSAGFVYLRFDNTESAVAAQHALHGRWF 493
             E EPDFDLDIKEDVQ+E S++G +KHI+V+KNSAGFVY+RF+N ++A+ AQHALHGRWF
Sbjct: 266  TETEPDFDLDIKEDVQEECSRFGNVKHIYVDKNSAGFVYMRFENMQAAINAQHALHGRWF 325

Query: 492  AAKMITATFMLPSDYDAKFPGS 427
            A K+ITATFM+P  Y+AKFP S
Sbjct: 326  AGKLITATFMVPQTYEAKFPDS 347


>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
            gi|223544486|gb|EEF46005.1| splicing factor, putative
            [Ricinus communis]
          Length = 609

 Score =  406 bits (1043), Expect = e-111
 Identities = 216/327 (66%), Positives = 249/327 (76%), Gaps = 29/327 (8%)
 Frame = -1

Query: 1320 ALSGQPLLGHPVMVKPSEAEKNLVQSTSAASGGLLGPYSGGARRLYVGNLPATIKEDQLR 1141
            ALSGQPLLG PVMVKPSEAEKNLVQST+  + G  GPYSGGARRLYVGNL   I EDQLR
Sbjct: 285  ALSGQPLLGQPVMVKPSEAEKNLVQSTTTVNAGS-GPYSGGARRLYVGNLHFNITEDQLR 343

Query: 1140 QVFEPFGIVELVQMPSDPGSGNCKGYAFIQFARLDDAKAAQNLNGQLEIAGRVIKVSAVT 961
            QVFEPFGIVELVQ+P D  +G+CKG+ F+QFARL+DAK A NLNGQ+EIAGR IKVS VT
Sbjct: 344  QVFEPFGIVELVQLPLDE-TGHCKGFGFVQFARLEDAKNALNLNGQVEIAGRPIKVSTVT 402

Query: 960  DQAGMQEAGANLADFDDDEGNGLSLNAQSRALLMQKLDRTGTASSFTG------------ 817
            DQ GMQ++  N  DFDDDEG GL+LNA+SRA+LMQKLDR+GTASS  G            
Sbjct: 403  DQTGMQDSTTNAGDFDDDEGGGLALNARSRAILMQKLDRSGTASSIAGSLGTSAASTGLA 462

Query: 816  ---ASVLGQT-------------SGQVLPGLPSAGLSIPALSGPSIDTIGVPSECLLLKN 685
               A +LG               S    PGLP A + +P  + PS+DTIGVPSECLLLKN
Sbjct: 463  VPTAPILGAAPVIPPIVAPLISGSAPAFPGLPGASVQLPG-AIPSVDTIGVPSECLLLKN 521

Query: 684  MFDQNVE-EPDFDLDIKEDVQDEVSKYGRIKHIHVEKNSAGFVYLRFDNTESAVAAQHAL 508
            MFD ++E EPDFDLDIKEDVQ E SK+G ++HI+V+KNSAGFVYLRF+NT+SA++AQ AL
Sbjct: 522  MFDPSIETEPDFDLDIKEDVQLECSKFGNLQHIYVDKNSAGFVYLRFENTQSAISAQRAL 581

Query: 507  HGRWFAAKMITATFMLPSDYDAKFPGS 427
            HGRWFA KMITATFM+P  Y+ KFP S
Sbjct: 582  HGRWFAGKMITATFMVPQVYETKFPDS 608


>ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 597

 Score =  396 bits (1017), Expect = e-108
 Identities = 213/316 (67%), Positives = 248/316 (78%), Gaps = 18/316 (5%)
 Frame = -1

Query: 1320 ALSGQPLLGHPVMVKPSEAEKNLVQST-SAASG--GLLGPYSGGARRLYVGNLPATIKED 1150
            ALSGQPLLG PVMVKPSEAEKNLVQST S A+G  GL+GPYSGGAR+LYVGNL  +I E 
Sbjct: 282  ALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHVSITEA 341

Query: 1149 QLRQVFEPFGIVELVQMPSDPGSGNCKGYAFIQFARLDDAKAAQNLNGQLEIAGRVIKVS 970
             +R+VFE FG VELVQ+P D  SG+CKG+ F+QFARL+DA+ AQ+LNGQLEI GR IKVS
Sbjct: 342  DIRRVFEAFGQVELVQLPLDE-SGHCKGFGFVQFARLEDARNAQSLNGQLEIGGRTIKVS 400

Query: 969  AVTDQAGMQEAGANLADFDDDEGNGLSLNAQSRALLMQKLDRTGTASSFTGA---SVLGQ 799
            AVTDQ+GMQE G N  DFDDDEG GLSLNA SRA+LMQKLDR+GTASS  G+   S +  
Sbjct: 401  AVTDQSGMQEVGGNTGDFDDDEGGGLSLNACSRAILMQKLDRSGTASSMVGSIGNSGVNN 460

Query: 798  T------SGQVLP-----GLPSAGLSIPALSGPSIDTIGVPSECLLLKNMFDQNVE-EPD 655
            T      +G +L      GL   GL IP  + PSID IGVPSECL+LKNMFD   E EPD
Sbjct: 461  TGLNLPATGNILAAAPVGGLAGGGLQIPTATIPSIDPIGVPSECLMLKNMFDPKDETEPD 520

Query: 654  FDLDIKEDVQDEVSKYGRIKHIHVEKNSAGFVYLRFDNTESAVAAQHALHGRWFAAKMIT 475
            FDLDIKEDV+ E SK+G +KHI+V+K SAGFVYLRF++T+SA++AQ ALHGRWFA KMIT
Sbjct: 521  FDLDIKEDVEAECSKFGALKHIYVDKKSAGFVYLRFEDTQSAISAQQALHGRWFAGKMIT 580

Query: 474  ATFMLPSDYDAKFPGS 427
            A+FM+P  Y+ KFP S
Sbjct: 581  ASFMVPQSYEDKFPDS 596


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