BLASTX nr result

ID: Scutellaria22_contig00007751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00007751
         (1777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007353938.1| ribosomal protein L20 (chloroplast) [Tectona...   197   8e-48
gb|ADD30296.1| ribosomal protein L20 [Ehretia acuminata]              197   8e-48
ref|YP_003359382.1| ribosomal protein L20 (chloroplast) [Olea eu...   196   1e-47
ref|YP_004564027.1| ribosomal protein L20 [Olea woodiana subsp. ...   196   1e-47
ref|YP_086989.1| ribosomal protein L20 [Panax ginseng] gi|680530...   195   4e-47

>ref|YP_007353938.1| ribosomal protein L20 (chloroplast) [Tectona grandis]
            gi|438687627|emb|CCP47153.1| ribosomal protein L20
            (chloroplast) [Tectona grandis]
            gi|438688311|emb|CCP47242.1| ribosomal protein L20
            (chloroplast) [Tectona grandis]
            gi|438688435|emb|CCP47331.1| ribosomal protein L20
            (chloroplast) [Tectona grandis]
          Length = 128

 Score =  197 bits (501), Expect = 8e-48
 Identities = 99/110 (90%), Positives = 104/110 (94%)
 Frame = +2

Query: 1337 LFVSSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRCLWITRLNAVIREGGVLYSY 1516
            LF SSFRG+HSRLTRTI+QQKIRALVSAHRDR KQKRNFR LWITR+NAVIRE GV YSY
Sbjct: 19   LFASSFRGSHSRLTRTISQQKIRALVSAHRDRAKQKRNFRRLWITRINAVIRERGVSYSY 78

Query: 1517 SKLIHDLYRGRLLLNRKILAQIAISNRNCLYMISNEIRKEVDWKEYTGII 1666
            SKLIHDLY+ +LLLNRKILAQIAISNRNCLYMISNEIRKEVDWKEYTGII
Sbjct: 79   SKLIHDLYKRQLLLNRKILAQIAISNRNCLYMISNEIRKEVDWKEYTGII 128


>gb|ADD30296.1| ribosomal protein L20 [Ehretia acuminata]
          Length = 128

 Score =  197 bits (501), Expect = 8e-48
 Identities = 99/110 (90%), Positives = 104/110 (94%)
 Frame = +2

Query: 1337 LFVSSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRCLWITRLNAVIREGGVLYSY 1516
            LF SSFRGAHSRLTRTITQQKIRALVSAHRDRD+QKRNFR LWITR+NAVIRE GV YSY
Sbjct: 19   LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKRNFRRLWITRINAVIRERGVSYSY 78

Query: 1517 SKLIHDLYRGRLLLNRKILAQIAISNRNCLYMISNEIRKEVDWKEYTGII 1666
            S+LIHDLY+ +LLLNRKILAQIAISNRNCLYMISNEIRKEVDWKE TGII
Sbjct: 79   SRLIHDLYKKQLLLNRKILAQIAISNRNCLYMISNEIRKEVDWKESTGII 128


>ref|YP_003359382.1| ribosomal protein L20 (chloroplast) [Olea europaea]
            gi|330850766|ref|YP_004376444.1| ribosomal protein L20
            [Olea europaea subsp. europaea]
            gi|334700305|ref|YP_004563804.1| ribosomal protein L20
            [Olea europaea subsp. cuspidata]
            gi|334701911|ref|YP_004564520.1| ribosomal protein L20
            [Olea europaea subsp. maroccana]
            gi|110456627|gb|ABG74754.1| ribosomal protein L20
            [Forsythia europaea] gi|281428710|gb|ADA69949.1|
            ribosomal protein L20 (chloroplast) [Olea europaea]
            gi|291059276|gb|ADD72112.1| ribosomal protein L20 [Olea
            europaea] gi|328795456|emb|CBR30338.1| ribosomal protein
            L20 [Olea europaea subsp. europaea]
            gi|334084424|emb|CBR23853.1| ribosomal protein L20 [Olea
            europaea subsp. cuspidata] gi|334084510|emb|CBR24646.1|
            ribosomal protein L20 [Olea europaea subsp. europaea]
            gi|334084596|emb|CBR30430.1| ribosomal protein L20 [Olea
            europaea subsp. europaea] gi|334084887|emb|CBS29265.1|
            ribosomal protein L20 [Olea europaea subsp. maroccana]
            gi|334084973|emb|CBJ04321.1| ribosomal protein L20 [Olea
            europaea subsp. cuspidata] gi|334085059|emb|CBR23762.1|
            ribosomal protein L20 [Olea europaea subsp. cuspidata]
          Length = 128

 Score =  196 bits (499), Expect = 1e-47
 Identities = 100/110 (90%), Positives = 103/110 (93%)
 Frame = +2

Query: 1337 LFVSSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRCLWITRLNAVIREGGVLYSY 1516
            LF SSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFR LWITR+NAVIRE GV YSY
Sbjct: 19   LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRRLWITRINAVIRERGVSYSY 78

Query: 1517 SKLIHDLYRGRLLLNRKILAQIAISNRNCLYMISNEIRKEVDWKEYTGII 1666
            SKLIHDLY+ +LLLNRKILAQIAISNRNCLYMISNEI KEVDWKE TGII
Sbjct: 79   SKLIHDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEVDWKESTGII 128


>ref|YP_004564027.1| ribosomal protein L20 [Olea woodiana subsp. woodiana]
            gi|110456698|gb|ABG74807.1| ribosomal protein L20
            [Jasminum abyssinicum] gi|334084682|emb|CBS29375.1|
            ribosomal protein L20 [Olea woodiana subsp. woodiana]
          Length = 128

 Score =  196 bits (499), Expect = 1e-47
 Identities = 100/110 (90%), Positives = 103/110 (93%)
 Frame = +2

Query: 1337 LFVSSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRCLWITRLNAVIREGGVLYSY 1516
            LF SSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFR LWITR+NAVIRE GV YSY
Sbjct: 19   LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRRLWITRINAVIREKGVSYSY 78

Query: 1517 SKLIHDLYRGRLLLNRKILAQIAISNRNCLYMISNEIRKEVDWKEYTGII 1666
            SKLIHDLY+ +LLLNRKILAQIAISNRNCLYMISNEI KEVDWKE TGII
Sbjct: 79   SKLIHDLYKRQLLLNRKILAQIAISNRNCLYMISNEIIKEVDWKESTGII 128


>ref|YP_086989.1| ribosomal protein L20 [Panax ginseng]
            gi|68053097|sp|Q68RY3.1|RK20_PANGI RecName: Full=50S
            ribosomal protein L20, chloroplastic
            gi|51235336|gb|AAT98532.1| ribosomal protein L20 [Panax
            ginseng]
          Length = 128

 Score =  195 bits (495), Expect = 4e-47
 Identities = 97/110 (88%), Positives = 104/110 (94%)
 Frame = +2

Query: 1337 LFVSSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRCLWITRLNAVIREGGVLYSY 1516
            LF SSFRGAHSRLTRTITQQKIRALVS+HRDRD+QKRNFR LWITR+NAVIREGGV YSY
Sbjct: 19   LFASSFRGAHSRLTRTITQQKIRALVSSHRDRDRQKRNFRRLWITRINAVIREGGVSYSY 78

Query: 1517 SKLIHDLYRGRLLLNRKILAQIAISNRNCLYMISNEIRKEVDWKEYTGII 1666
            S+LIHDLY+ +LLLNRKILAQIAISN+NCLYMISNEI KEVDWKE TGII
Sbjct: 79   SRLIHDLYKKQLLLNRKILAQIAISNKNCLYMISNEIIKEVDWKESTGII 128


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