BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00005873
         (2060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...   410   e-121
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   410   e-120
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   393   e-107
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp....   372   e-100
emb|CAD20832.1| sigma factor [Spinacia oleracea]                      370   1e-99

>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|296081598|emb|CBI20603.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  410 bits (1053), Expect(2) = e-121
 Identities = 218/385 (56%), Positives = 265/385 (68%)
 Frame = +3

Query: 645  SSCSFDLSNAPAEIVNEPSRVNDTEDDXXXXXXXXXXXXELRKLRRKHTVEKETAASMQE 824
            +S SFDL +AP E + E  + N T DD            E RK +R+  +EK        
Sbjct: 176  TSTSFDLFSAPTEHIRE-CQTNGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFP 234

Query: 825  FASETISKYMQQPKFASARRTQRSRNKRQKIAKNEAEMSTGVKLVAXXXXXXXXXXXXSG 1004
              S+TI K   +P  ++ +RT  SR KR   AKNEAEMS GVKLVA             G
Sbjct: 235  LPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIG 294

Query: 1005 QAPSLSSWAEAAGVEKKELQNRLHYGWHCRDELLRSTRSLVLFIARNYSGLGVAFEDLIQ 1184
               SLS+WAEAAGV+KK LQ +L +GW+CRDELLRST SLVL+IARNY G+GVAFED++Q
Sbjct: 295  HVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQ 354

Query: 1185 AGKLGVLQGAERFDQSRGYKFSTYVQYWVKKSMSTLVARHARGVRIPCTLTKVINQVKKA 1364
            AG LGVLQGAERFD ++GY+FSTYVQYW++KSMSTLVARHARGV+IP TL + I Q++KA
Sbjct: 355  AGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQKA 414

Query: 1365 RKALSTSNGKYPDDIEIAKFTGLPMAKIVSASKCLRVVGSIDQKIGLSINTTFMETTHDT 1544
            RKAL  S+G+YPDD EIAKFTGL +AKI SA  CLRVVGS DQ        T +E T DT
Sbjct: 415  RKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQDCWGATILEFTPDT 474

Query: 1545 SIVSPEESACRQHMINDVYTLLHGLEPREKQVIILRFGLGNHQCKSLEEIGRRFRVSKEW 1724
            SI SPEE   +Q    D++ LL GL+PRE+Q+++LR+G G  Q KSLEEIGRRF VSKEW
Sbjct: 475  SIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRFNVSKEW 534

Query: 1725 IRKIERAALTKLRSADSFKILSHYV 1799
            IRK+E+ AL  LR  +  + L HYV
Sbjct: 535  IRKLEKTALANLRDEEICQNLRHYV 559



 Score = 55.1 bits (131), Expect(2) = e-121
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
 Frame = +2

Query: 128 MGFRLHVKWAGXXXXXXXXXXXXXXXXXXXCRGRDNSYFLARLS---AEYGEAETL-NDT 295
           MGFRL++KW                      +G++ S+   R S       + E+L  D 
Sbjct: 3   MGFRLNLKW-DFPISCPTLTNSPSRLCTSSVQGKEASFDSTRFSFPSVTSEDCESLYKDP 61

Query: 296 SRVQVCSSSH-QLLEKSFVETRELKVVLGKGSGDGLYSLLNDDIQTSNNEDKLGYLTSLQ 472
            +   CSS   Q  E  +     +K+ +GK S   L+ ++N   Q    ED    +  LQ
Sbjct: 62  FKPFACSSGALQTFENDYSAMEAMKMKIGKCSHGDLFKIVNAS-QAPIGEDISASVAGLQ 120

Query: 473 ATQASQYRLLMKNLDMLDYMFSDSH 547
           A++ASQ+ LL++NLD+L+ MF+DS+
Sbjct: 121 ASKASQFSLLLENLDILEEMFADSN 145


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  410 bits (1053), Expect(2) = e-120
 Identities = 218/385 (56%), Positives = 265/385 (68%)
 Frame = +3

Query: 645  SSCSFDLSNAPAEIVNEPSRVNDTEDDXXXXXXXXXXXXELRKLRRKHTVEKETAASMQE 824
            +S SFDL +AP E + E  + N T DD            E RK +R+  +EK        
Sbjct: 226  TSTSFDLFSAPTEHIRE-CQTNGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFP 284

Query: 825  FASETISKYMQQPKFASARRTQRSRNKRQKIAKNEAEMSTGVKLVAXXXXXXXXXXXXSG 1004
              S+TI K   +P  ++ +RT  SR KR   AKNEAEMS GVKLVA             G
Sbjct: 285  LPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIG 344

Query: 1005 QAPSLSSWAEAAGVEKKELQNRLHYGWHCRDELLRSTRSLVLFIARNYSGLGVAFEDLIQ 1184
               SLS+WAEAAGV+KK LQ +L +GW+CRDELLRST SLVL+IARNY G+GVAFED++Q
Sbjct: 345  HVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQ 404

Query: 1185 AGKLGVLQGAERFDQSRGYKFSTYVQYWVKKSMSTLVARHARGVRIPCTLTKVINQVKKA 1364
            AG LGVLQGAERFD ++GY+FSTYVQYW++KSMSTLVARHARGV+IP TL + I Q++KA
Sbjct: 405  AGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQKA 464

Query: 1365 RKALSTSNGKYPDDIEIAKFTGLPMAKIVSASKCLRVVGSIDQKIGLSINTTFMETTHDT 1544
            RKAL  S+G+YPDD EIAKFTGL +AKI SA  CLRVVGS DQ        T +E T DT
Sbjct: 465  RKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQDCWGATILEFTPDT 524

Query: 1545 SIVSPEESACRQHMINDVYTLLHGLEPREKQVIILRFGLGNHQCKSLEEIGRRFRVSKEW 1724
            SI SPEE   +Q    D++ LL GL+PRE+Q+++LR+G G  Q KSLEEIGRRF VSKEW
Sbjct: 525  SIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRFNVSKEW 584

Query: 1725 IRKIERAALTKLRSADSFKILSHYV 1799
            IRK+E+ AL  LR  +  + L HYV
Sbjct: 585  IRKLEKTALANLRDEEICQNLRHYV 609



 Score = 50.8 bits (120), Expect(2) = e-120
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
 Frame = +2

Query: 221 RGRDNSYFLARLS---AEYGEAETL-NDTSRVQVCSSSH-QLLEKSFVETRELKVVLGKG 385
           +G++ S+   R S       + E+L  D  +   CSS   Q  E  +     +K+ +GK 
Sbjct: 83  QGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGKC 142

Query: 386 SGDGLYSLLNDDIQTSNNEDKLGYLTSLQATQASQYRLLMKNLDMLDYMFSDSH 547
           S   L+ ++N   Q    ED    +  LQA++ASQ+ LL++NLD+L+ MF+DS+
Sbjct: 143 SHGDLFKIVNAS-QAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSN 195


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 560

 Score =  393 bits (1010), Expect = e-107
 Identities = 198/381 (51%), Positives = 272/381 (71%), Gaps = 1/381 (0%)
 Frame = +3

Query: 660  DLSNAPAEIVNEPSRVNDTEDDXXXXXXXXXXXXELRKLRRKH-TVEKETAASMQEFASE 836
            ++S+   EI+ E   +N T  +            E RK RR+  +  K   +      S 
Sbjct: 179  EVSDVHTEIIGE-CNINGTSINNQIKVVVHTAKKEERKSRRERASARKGHKSPSLPLPSR 237

Query: 837  TISKYMQQPKFASARRTQRSRNKRQKIAKNEAEMSTGVKLVAXXXXXXXXXXXXSGQAPS 1016
             I    ++P  +S ++  +S+++R  IA+NEAEM+ G+K++A            + +  S
Sbjct: 238  PIQSGSEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEETERVVS 297

Query: 1017 LSSWAEAAGVEKKELQNRLHYGWHCRDELLRSTRSLVLFIARNYSGLGVAFEDLIQAGKL 1196
            LS WAEAAG++ K LQ +L +GW+CRDEL++STRSLVL+ ARNY G G+A EDL+QAG L
Sbjct: 298  LSCWAEAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRGTGIALEDLLQAGNL 357

Query: 1197 GVLQGAERFDQSRGYKFSTYVQYWVKKSMSTLVARHARGVRIPCTLTKVINQVKKARKAL 1376
            GVL+GAERFD +RGY+FSTYVQYW++KSMS +V+R ARG++IPCTL++ I Q++KARKAL
Sbjct: 358  GVLEGAERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQIPCTLSRAIYQIQKARKAL 417

Query: 1377 STSNGKYPDDIEIAKFTGLPMAKIVSASKCLRVVGSIDQKIGLSINTTFMETTHDTSIVS 1556
            +TSNGKYPDD EIAK+TGL +AKI SAS+CLRVVGSIDQKIG S+N  ++E   DTS+ S
Sbjct: 418  TTSNGKYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKIGESLNAKYLEFLPDTSVQS 477

Query: 1557 PEESACRQHMINDVYTLLHGLEPREKQVIILRFGLGNHQCKSLEEIGRRFRVSKEWIRKI 1736
            PEE   RQHMI D++ LL  L+ RE+QV+ILRFGL ++Q KSLEEIGR F VSKEW+R++
Sbjct: 478  PEEVVMRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHFHVSKEWVRRL 537

Query: 1737 ERAALTKLRSADSFKILSHYV 1799
            E+  +T+LR+ ++ + L HY+
Sbjct: 538  EKRVMTRLRNEETCRNLRHYI 558


>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297323785|gb|EFH54206.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 568

 Score =  372 bits (954), Expect = e-100
 Identities = 194/348 (55%), Positives = 251/348 (72%), Gaps = 2/348 (0%)
 Frame = +3

Query: 762  ELRKLRRKHTVEKETA-ASMQEFASETISKYMQQPKFASARRTQRSRNKRQKIAKNEAEM 938
            +L+K  R+ TV  E            T    +  P+    RR  + R KR++I+KNEAEM
Sbjct: 222  KLKKKARRSTVTAENGDQGSLPMGLRTTWNNIDVPR---VRRPPKYRKKRERISKNEAEM 278

Query: 939  STGVKLVAXXXXXXXXXXXXSGQAPSLSSWAEAAGVEKKELQNRLHYGWHCRDELLRSTR 1118
            STGVK+VA            SG+  SLS WAEAAG+ +K L   LHYGW+CRDELL+STR
Sbjct: 279  STGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLLMRNLHYGWYCRDELLKSTR 338

Query: 1119 SLVLFIARNYSGLGVAFEDLIQAGKLGVLQGAERFDQSRGYKFSTYVQYWVKKSMSTLVA 1298
            SLVLF+ARNY GLG+A EDLIQAG +GVLQGAERFD +RGYKFSTYVQYW++KSMS +V+
Sbjct: 339  SLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSMMVS 398

Query: 1299 RHARGVRIPCTLTKVINQVKKARKALSTSNG-KYPDDIEIAKFTGLPMAKIVSASKCLRV 1475
            RHARGV IP ++ + INQ++KARK L TS+G KYP D +I+K T L + KI +A++CL+V
Sbjct: 399  RHARGVHIPSSIIRTINQIQKARKTLKTSHGIKYPADEDISKLTSLSVKKIRAANQCLKV 458

Query: 1476 VGSIDQKIGLSINTTFMETTHDTSIVSPEESACRQHMINDVYTLLHGLEPREKQVIILRF 1655
            VGSI++K+G   +T F+E T DT++ SPEE+  RQ    D++ LL GLEPREKQV++LR+
Sbjct: 459  VGSIEKKVGDCFSTKFLEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRY 518

Query: 1656 GLGNHQCKSLEEIGRRFRVSKEWIRKIERAALTKLRSADSFKILSHYV 1799
            GL N++ KSLEEIG+  RVSKEWIRKIER A+ KLR   + + L +Y+
Sbjct: 519  GLQNYRPKSLEEIGKLLRVSKEWIRKIERRAMAKLRDQPNAEDLRYYL 566


>emb|CAD20832.1| sigma factor [Spinacia oleracea]
          Length = 548

 Score =  370 bits (949), Expect = 1e-99
 Identities = 186/380 (48%), Positives = 266/380 (70%)
 Frame = +3

Query: 660  DLSNAPAEIVNEPSRVNDTEDDXXXXXXXXXXXXELRKLRRKHTVEKETAASMQEFASET 839
            D+S+ P  ++ E  + N  +D+            E RKLR++  ++  T+      +  +
Sbjct: 170  DMSDLPG-LITEDGKANVRKDNELKKKLVFSKRKEERKLRQERRLQASTSKRCACKSESS 228

Query: 840  ISKYMQQPKFASARRTQRSRNKRQKIAKNEAEMSTGVKLVAXXXXXXXXXXXXSGQAPSL 1019
            I   +      +A++T ++R +R  IAKNEAEMS G+K+VA            +G+A SL
Sbjct: 229  IESSIHHVVSTAAKKT-KARGRRAIIAKNEAEMSRGIKVVAQLEKVKLTLEKETGKAVSL 287

Query: 1020 SSWAEAAGVEKKELQNRLHYGWHCRDELLRSTRSLVLFIARNYSGLGVAFEDLIQAGKLG 1199
            + WAEAAG+++K LQ+ LH+GW+CRDELL+S RSLVL+++R Y GLGVA EDL+QAG +G
Sbjct: 288  NCWAEAAGIDEKVLQHDLHFGWYCRDELLKSGRSLVLYLSRYYRGLGVAHEDLMQAGNIG 347

Query: 1200 VLQGAERFDQSRGYKFSTYVQYWVKKSMSTLVARHARGVRIPCTLTKVINQVKKARKALS 1379
            +LQGAERFD +RGY+FSTYVQYW++K+MS LV+RH RG+++P TL+  IN+V+KARK L 
Sbjct: 348  ILQGAERFDHTRGYQFSTYVQYWIRKAMSQLVSRHGRGIKVPTTLSTTINRVQKARKILK 407

Query: 1380 TSNGKYPDDIEIAKFTGLPMAKIVSASKCLRVVGSIDQKIGLSINTTFMETTHDTSIVSP 1559
             S GK+PDD+E++K TGL + KI SA  CLR+VGS+DQK+G  IN  ++E T DT++  P
Sbjct: 408  RSQGKHPDDVEVSKSTGLSLDKIKSADNCLRIVGSLDQKVGHFINMKYLECTPDTALEMP 467

Query: 1560 EESACRQHMINDVYTLLHGLEPREKQVIILRFGLGNHQCKSLEEIGRRFRVSKEWIRKIE 1739
            E++  +QHM NDV+ LL  L+P+E++V+I R+GL  H C SL E+G+ F VSKEWIRK+E
Sbjct: 468  EKTVMKQHMRNDVHKLLQELDPKERRVLIHRYGLEGH-CMSLHEVGKVFDVSKEWIRKME 526

Query: 1740 RAALTKLRSADSFKILSHYV 1799
            + ALTKLR+  +   L HY+
Sbjct: 527  KRALTKLRTEQNQTNLKHYL 546