BLASTX nr result

ID: Scutellaria22_contig00005628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00005628
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24668.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002273791.1| PREDICTED: uncharacterized protein C3B8.09-l...   109   2e-22
ref|XP_002880057.1| Sas10/U3 ribonucleoprotein family protein [A...    91   7e-17
dbj|BAE98799.1| hypothetical protein [Arabidopsis thaliana]            90   2e-16
ref|NP_850397.1| Sas10/U3 ribonucleoprotein-like protein [Arabid...    90   2e-16

>emb|CBI24668.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  109 bits (273), Expect = 2e-22
 Identities = 56/81 (69%), Positives = 67/81 (82%)
 Frame = -2

Query: 246 GKPTSKGSLEKVIKDEDGMVYEIVKKDLNALTKEEQMDVVYSSAPELIGLLSELNDALEQ 67
           GK TSK   ++  KD+ G  YE VKKDLNAL+KEEQMDVVYSSAPEL+GLLSELNDALEQ
Sbjct: 245 GKTTSKSLADEEAKDDTGTAYEEVKKDLNALSKEEQMDVVYSSAPELVGLLSELNDALEQ 304

Query: 66  LENKVNPLVDKIRGRESAKKG 4
           LE KVNPL+ K++G ++ K+G
Sbjct: 305 LEGKVNPLLAKVKG-QNTKEG 324


>ref|XP_002273791.1| PREDICTED: uncharacterized protein C3B8.09-like [Vitis vinifera]
          Length = 669

 Score =  109 bits (273), Expect = 2e-22
 Identities = 56/81 (69%), Positives = 67/81 (82%)
 Frame = -2

Query: 246 GKPTSKGSLEKVIKDEDGMVYEIVKKDLNALTKEEQMDVVYSSAPELIGLLSELNDALEQ 67
           GK TSK   ++  KD+ G  YE VKKDLNAL+KEEQMDVVYSSAPEL+GLLSELNDALEQ
Sbjct: 195 GKTTSKSLADEEAKDDTGTAYEEVKKDLNALSKEEQMDVVYSSAPELVGLLSELNDALEQ 254

Query: 66  LENKVNPLVDKIRGRESAKKG 4
           LE KVNPL+ K++G ++ K+G
Sbjct: 255 LEGKVNPLLAKVKG-QNTKEG 274


>ref|XP_002880057.1| Sas10/U3 ribonucleoprotein family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325896|gb|EFH56316.1| Sas10/U3
           ribonucleoprotein family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 662

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/82 (53%), Positives = 62/82 (75%)
 Frame = -2

Query: 246 GKPTSKGSLEKVIKDEDGMVYEIVKKDLNALTKEEQMDVVYSSAPELIGLLSELNDALEQ 67
           GK  +K   +K  KD+     E +KKD+N+L+KEEQMDVVYSSAPE++GLLSELN A+E+
Sbjct: 195 GKQATKSITDKKEKDDKDTHVEEIKKDINSLSKEEQMDVVYSSAPEIVGLLSELNYAVEE 254

Query: 66  LENKVNPLVDKIRGRESAKKGG 1
           LE+K+NP++ K++  E +  GG
Sbjct: 255 LESKINPVLSKLKEGEISLNGG 276


>dbj|BAE98799.1| hypothetical protein [Arabidopsis thaliana]
          Length = 383

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/81 (53%), Positives = 62/81 (76%)
 Frame = -2

Query: 246 GKPTSKGSLEKVIKDEDGMVYEIVKKDLNALTKEEQMDVVYSSAPELIGLLSELNDALEQ 67
           GK  +K   +K  K +     E +KKD+N+L+KEEQMDVVYSSAPE++GLLSELNDA+E+
Sbjct: 193 GKQATKSITDKKEKGDKDTHVEEIKKDINSLSKEEQMDVVYSSAPEIVGLLSELNDAVEE 252

Query: 66  LENKVNPLVDKIRGRESAKKG 4
           LE+K+NP+++K++  E +  G
Sbjct: 253 LESKINPVMNKLKEGEISLNG 273


>ref|NP_850397.1| Sas10/U3 ribonucleoprotein-like protein [Arabidopsis thaliana]
           gi|20466446|gb|AAM20540.1| unknown protein [Arabidopsis
           thaliana] gi|22136384|gb|AAM91270.1| unknown protein
           [Arabidopsis thaliana] gi|330255207|gb|AEC10301.1|
           Sas10/U3 ribonucleoprotein-like protein [Arabidopsis
           thaliana]
          Length = 654

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/81 (53%), Positives = 62/81 (76%)
 Frame = -2

Query: 246 GKPTSKGSLEKVIKDEDGMVYEIVKKDLNALTKEEQMDVVYSSAPELIGLLSELNDALEQ 67
           GK  +K   +K  K +     E +KKD+N+L+KEEQMDVVYSSAPE++GLLSELNDA+E+
Sbjct: 193 GKQATKSITDKKEKGDKDTHVEEIKKDINSLSKEEQMDVVYSSAPEIVGLLSELNDAVEE 252

Query: 66  LENKVNPLVDKIRGRESAKKG 4
           LE+K+NP+++K++  E +  G
Sbjct: 253 LESKINPVMNKLKEGEISLNG 273


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