BLASTX nr result

ID: Scutellaria22_contig00005348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00005348
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-l...   327   4e-87
ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co...   322   1e-85
ref|XP_002306300.1| predicted protein [Populus trichocarpa] gi|2...   315   8e-84
ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-l...   314   2e-83
gb|ACJ84516.1| unknown [Medicago truncatula] gi|388501418|gb|AFK...   313   5e-83

>ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 215

 Score =  327 bits (837), Expect = 4e-87
 Identities = 161/210 (76%), Positives = 171/210 (81%)
 Frame = +2

Query: 26  VYGGEIPDEGEXXXXXXXXXXXXXXXXXXXXXXXXXXRLKEMEDEAAALREMQAKVEKEM 205
           VYGGEIPDEGE                          RLKEME+EAAALREMQAKV+KE+
Sbjct: 8   VYGGEIPDEGEMEGDIDMSAADDDAAVKELDEMKR--RLKEMEEEAAALREMQAKVDKEI 65

Query: 206 GAVQDPXXXXXXXXXKEEVDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ 385
           G+VQDP         KEE DSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ
Sbjct: 66  GSVQDPANSAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ 125

Query: 386 PKGFAYVEFIEQEAIQEALQLNESELHGRQLKVMMKRTNVPGMKQYRPRRFNPYMAYGYR 565
           PKGFAYVEF+E EA+QEAL LNESELHGRQLKV+ KRTNVPGMKQYRPRRFNPYMAYG+R
Sbjct: 126 PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGFR 185

Query: 566 RPYTPPYFYSPYGYGKVPRFRRPSRYMPYY 655
           RPYTPPYFYSPYGYGKVPRFRRP+RYMPY+
Sbjct: 186 RPYTPPYFYSPYGYGKVPRFRRPNRYMPYH 215


>ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
           gi|223528706|gb|EEF30719.1| poly-A binding protein,
           putative [Ricinus communis]
          Length = 218

 Score =  322 bits (824), Expect = 1e-85
 Identities = 161/211 (76%), Positives = 166/211 (78%), Gaps = 1/211 (0%)
 Frame = +2

Query: 26  VYGGEIPD-EGEXXXXXXXXXXXXXXXXXXXXXXXXXXRLKEMEDEAAALREMQAKVEKE 202
           VYGGEIPD EG+                          RLKEME+EAAALREMQAKVEKE
Sbjct: 8   VYGGEIPDMEGDIDPHNVDMDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67

Query: 203 MGAVQDPXXXXXXXXXKEEVDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 382
           MGAVQDP         KEE DSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 68  MGAVQDPASAAANQANKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 127

Query: 383 QPKGFAYVEFIEQEAIQEALQLNESELHGRQLKVMMKRTNVPGMKQYRPRRFNPYMAYGY 562
           QPKGFAYVEF+E EAIQEAL LNESELHGRQLKV+ KRTNVPGMKQYRPRRFNPYM Y +
Sbjct: 128 QPKGFAYVEFLEVEAIQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMGYRF 187

Query: 563 RRPYTPPYFYSPYGYGKVPRFRRPSRYMPYY 655
           RRPY PPYFYSPYGYGK PRFRRP RYMPYY
Sbjct: 188 RRPYVPPYFYSPYGYGKAPRFRRPMRYMPYY 218


>ref|XP_002306300.1| predicted protein [Populus trichocarpa] gi|222855749|gb|EEE93296.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  315 bits (808), Expect = 8e-84
 Identities = 158/211 (74%), Positives = 164/211 (77%), Gaps = 1/211 (0%)
 Frame = +2

Query: 26  VYGGEIPD-EGEXXXXXXXXXXXXXXXXXXXXXXXXXXRLKEMEDEAAALREMQAKVEKE 202
           VYGGEIPD EG+                          RLKEME+EAAALREMQAKVEKE
Sbjct: 8   VYGGEIPDVEGDMDPHNADVDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKE 67

Query: 203 MGAVQDPXXXXXXXXXKEEVDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 382
           MGAVQDP         +EE DSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG
Sbjct: 68  MGAVQDPATAAANQANREEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG 127

Query: 383 QPKGFAYVEFIEQEAIQEALQLNESELHGRQLKVMMKRTNVPGMKQYRPRRFNPYMAYGY 562
           QPKGFAYVEF+E EA+QEAL LNESELHGRQLKV  KRTNVPGMKQYRPRR NPYM Y +
Sbjct: 128 QPKGFAYVEFLEVEAVQEALALNESELHGRQLKVSPKRTNVPGMKQYRPRRINPYMGYRF 187

Query: 563 RRPYTPPYFYSPYGYGKVPRFRRPSRYMPYY 655
           RRPY PPYFYSPYGYGKVPRFRR  RYMPYY
Sbjct: 188 RRPYAPPYFYSPYGYGKVPRFRRSMRYMPYY 218


>ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 220

 Score =  314 bits (805), Expect = 2e-83
 Identities = 159/214 (74%), Positives = 168/214 (78%), Gaps = 4/214 (1%)
 Frame = +2

Query: 26  VYGGEIPDEGEXXXXXXXXXXXXXXXXXXXXXXXXXX----RLKEMEDEAAALREMQAKV 193
           VYGGEIPDEGE                              RLKEME+EAAALREMQAKV
Sbjct: 8   VYGGEIPDEGEMEGDIDMSAADDEAAVDDDAAVKELDEMKRRLKEMEEEAAALREMQAKV 67

Query: 194 EKEMGAVQDPXXXXXXXXXKEEVDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 373
           EKE+G+VQDP         KEE D+RSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD
Sbjct: 68  EKEIGSVQDPANAAASQANKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 127

Query: 374 KFGQPKGFAYVEFIEQEAIQEALQLNESELHGRQLKVMMKRTNVPGMKQYRPRRFNPYMA 553
           KFGQPKGFAYVEF+E EA+QEAL LNESELHGRQLKV+ KRTNVPGMKQYRPR FNPYMA
Sbjct: 128 KFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRCFNPYMA 187

Query: 554 YGYRRPYTPPYFYSPYGYGKVPRFRRPSRYMPYY 655
           YG+RRPYT PY YSPYGYGKVPRFRRP+RYMPYY
Sbjct: 188 YGFRRPYT-PYLYSPYGYGKVPRFRRPNRYMPYY 220


>gb|ACJ84516.1| unknown [Medicago truncatula] gi|388501418|gb|AFK38775.1| unknown
           [Medicago truncatula]
          Length = 216

 Score =  313 bits (801), Expect = 5e-83
 Identities = 154/210 (73%), Positives = 165/210 (78%)
 Frame = +2

Query: 26  VYGGEIPDEGEXXXXXXXXXXXXXXXXXXXXXXXXXXRLKEMEDEAAALREMQAKVEKEM 205
           VYGGEIPD  E                          RLKEME+EAAALREM AKVEKE+
Sbjct: 8   VYGGEIPDVAEMEGDVDMSAADDEAGGMKELDEMRR-RLKEMEEEAAALREMHAKVEKEI 66

Query: 206 GAVQDPXXXXXXXXXKEEVDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ 385
           G+VQDP         KEE D+RSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ
Sbjct: 67  GSVQDPASVAASQENKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQ 126

Query: 386 PKGFAYVEFIEQEAIQEALQLNESELHGRQLKVMMKRTNVPGMKQYRPRRFNPYMAYGYR 565
           PKGFAYVEF+E EA+QEAL L+ESELHGRQLKV+ KRTNVPGMKQYRPRRFNPYMAYG+R
Sbjct: 127 PKGFAYVEFVETEAVQEALLLSESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGFR 186

Query: 566 RPYTPPYFYSPYGYGKVPRFRRPSRYMPYY 655
           RPY PPY YSPYGYGK PR+RRP+RYMPYY
Sbjct: 187 RPYAPPYMYSPYGYGKAPRYRRPNRYMPYY 216


Top