BLASTX nr result

ID: Scutellaria22_contig00004970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00004970
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, ...   145   1e-32
sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal protein L12, ...   145   2e-32
emb|CAA44226.1| ribosomal protein L12-1a [Nicotiana tabacum]          145   2e-32
gb|ABF06704.1| Joka20 [Nicotiana plumbaginifolia]                     145   2e-32
ref|XP_002277258.1| PREDICTED: 50S ribosomal protein L12, chloro...   114   4e-23

>sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|248303|gb|AAB21989.1|
           ribosomal protein L12 [Nicotiana sylvestris]
          Length = 186

 Score =  145 bits (366), Expect = 1e-32
 Identities = 83/131 (63%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
 Frame = +1

Query: 190 PKQSVEFPLKATPTFLRRRASAVRPLAAVDAPEKVVDLGDQISNLTLADAQKLVEYLQDK 369
           PK+++EFP++ TP    RRA+ +RPLAAV+APEKVV LGD+ISNLTLADAQKLVEYLQDK
Sbjct: 28  PKKTLEFPIR-TPKLQNRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDK 86

Query: 370 LG--XXXXXXXXXXXXXXXXXXXXXXXXXKTEFDVVIDDVPSSSRIATIKVVRALTSLPL 543
           LG                           KTEFDVVID+VPS++RIATIK VRALTSL L
Sbjct: 87  LGVTAASFAPAAVVAAPGAAAEAPAVVEEKTEFDVVIDEVPSNARIATIKAVRALTSLAL 146

Query: 544 KEAKELIEGLP 576
           KEAKELIEGLP
Sbjct: 147 KEAKELIEGLP 157


>sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|20018|emb|CAA44214.1|
           ribosomal protein L12-1 [Nicotiana tabacum]
          Length = 186

 Score =  145 bits (365), Expect = 2e-32
 Identities = 83/131 (63%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
 Frame = +1

Query: 190 PKQSVEFPLKATPTFLRRRASAVRPLAAVDAPEKVVDLGDQISNLTLADAQKLVEYLQDK 369
           PK+++EFP++ TP    RRA+ +RPLAAV+APEKVV LGD+ISNLTLADAQKLVEYLQDK
Sbjct: 28  PKKALEFPIR-TPKLHHRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDK 86

Query: 370 LG--XXXXXXXXXXXXXXXXXXXXXXXXXKTEFDVVIDDVPSSSRIATIKVVRALTSLPL 543
           LG                           KTEFDVVID+VPS++RIATIK VRALTSL L
Sbjct: 87  LGVTAASFAPAAVAAAPGAAAEAPAVVEEKTEFDVVIDEVPSNARIATIKAVRALTSLAL 146

Query: 544 KEAKELIEGLP 576
           KEAKELIEGLP
Sbjct: 147 KEAKELIEGLP 157


>emb|CAA44226.1| ribosomal protein L12-1a [Nicotiana tabacum]
          Length = 191

 Score =  145 bits (365), Expect = 2e-32
 Identities = 83/131 (63%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
 Frame = +1

Query: 190 PKQSVEFPLKATPTFLRRRASAVRPLAAVDAPEKVVDLGDQISNLTLADAQKLVEYLQDK 369
           PK+++EFP++ TP    RRA+ +RPLAAV+APEKVV LGD+ISNLTLADAQKLVEYLQDK
Sbjct: 28  PKKALEFPIR-TPKLHHRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDK 86

Query: 370 LG--XXXXXXXXXXXXXXXXXXXXXXXXXKTEFDVVIDDVPSSSRIATIKVVRALTSLPL 543
           LG                           KTEFDVVID+VPS++RIATIK VRALTSL L
Sbjct: 87  LGVTAASFAPAAVAAAPGAAAEAPAVVEEKTEFDVVIDEVPSNARIATIKAVRALTSLAL 146

Query: 544 KEAKELIEGLP 576
           KEAKELIEGLP
Sbjct: 147 KEAKELIEGLP 157


>gb|ABF06704.1| Joka20 [Nicotiana plumbaginifolia]
          Length = 161

 Score =  145 bits (365), Expect = 2e-32
 Identities = 83/131 (63%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
 Frame = +1

Query: 190 PKQSVEFPLKATPTFLRRRASAVRPLAAVDAPEKVVDLGDQISNLTLADAQKLVEYLQDK 369
           PK+++EFP++ TP    RRA+ +RPLAAV+APEKVV LGD+ISNLTLADAQKLVEYLQDK
Sbjct: 28  PKKTLEFPIR-TPKLHHRRATFLRPLAAVEAPEKVVQLGDEISNLTLADAQKLVEYLQDK 86

Query: 370 LG--XXXXXXXXXXXXXXXXXXXXXXXXXKTEFDVVIDDVPSSSRIATIKVVRALTSLPL 543
           LG                           KTEFDVVID+VPS++RIATIK VRALTSL L
Sbjct: 87  LGVTAASFAPAAVVAAPGAAAEAPGVVEEKTEFDVVIDEVPSNARIATIKAVRALTSLAL 146

Query: 544 KEAKELIEGLP 576
           KEAKELIEGLP
Sbjct: 147 KEAKELIEGLP 157


>ref|XP_002277258.1| PREDICTED: 50S ribosomal protein L12, chloroplastic [Vitis
           vinifera]
          Length = 184

 Score =  114 bits (284), Expect = 4e-23
 Identities = 68/133 (51%), Positives = 89/133 (66%), Gaps = 2/133 (1%)
 Frame = +1

Query: 184 NSPKQSVEFPLKATPTFLRRRASAVRPLAAVDAPEKVVDLGDQISNLTLADAQKLVEYLQ 363
           +S KQ+++FP +  P  + R A+ VRP++AV APEK+  +G ++SNLTL +A+ LV++LQ
Sbjct: 25  HSFKQTLDFPFR-NPKIIHR-ATFVRPISAVAAPEKIEKIGTELSNLTLEEARILVDWLQ 82

Query: 364 DKLGXXXXXXXXXXXXXXXXXXXXXXXXX--KTEFDVVIDDVPSSSRIATIKVVRALTSL 537
           DKLG                           KTEFDV+I+DVPS++RIATIK VRALTSL
Sbjct: 83  DKLGVSAAAFAPAAVAVAPGAVADAPAVVEEKTEFDVMIEDVPSNARIATIKAVRALTSL 142

Query: 538 PLKEAKELIEGLP 576
            LKEAKELIEGLP
Sbjct: 143 ALKEAKELIEGLP 155


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