BLASTX nr result

ID: Scutellaria22_contig00004838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00004838
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275875.1| PREDICTED: transcription factor tau subunit ...   366   6e-99
emb|CBI24753.3| unnamed protein product [Vitis vinifera]              342   1e-91
ref|XP_003537671.1| PREDICTED: general transcription factor 3C p...   298   1e-78
ref|XP_003622988.1| General transcription factor 3C polypeptide ...   280   5e-73
ref|NP_190510.3| Transcription factor IIIC, subunit 5 [Arabidops...   280   5e-73

>ref|XP_002275875.1| PREDICTED: transcription factor tau subunit sfc1-like [Vitis
           vinifera]
          Length = 568

 Score =  366 bits (939), Expect = 6e-99
 Identities = 186/293 (63%), Positives = 221/293 (75%)
 Frame = -3

Query: 881 MGIIKDGSISGVLPSSSEAFAVHYPGYPSSTQRAIETLGGTQGILKVRAEKSNKLKLHFR 702
           MG+I++GSISG +PS+ EAF+VHYP YPSST RAIETLGGTQ I K R+ +SNKL+LHFR
Sbjct: 1   MGVIEEGSISGYIPSN-EAFSVHYPAYPSSTARAIETLGGTQAIRKARSSQSNKLELHFR 59

Query: 701 PEDPYSHPAFGKLQPCNNFLLRISKKKVKDIQNGSTEHIIEPDHTILASSEVKAQIKDGA 522
           PEDPYSHPAFG+LQPCNN LLRISKKK  D Q+ S          +    EV+AQI    
Sbjct: 60  PEDPYSHPAFGELQPCNNLLLRISKKKSTDGQSES----------VATGEEVEAQISGEV 109

Query: 521 EEQLSMDIVARVSEAYFFDGMVDYQHVLAVHAHTTQRRKRNLADIEPQLEYVDLADVDQE 342
             +L  DI+ARVSEAY F+GMVDYQHVL VHA   +R+KRN A++EP LE  DL DVDQE
Sbjct: 110 PIRLCADIIARVSEAYHFNGMVDYQHVLPVHADVARRKKRNWAEVEPHLEKGDLVDVDQE 169

Query: 341 DLMMLVPPLFSLKDHPEKVIFKPSGDPSLKKKPVGVVKPRSEMKIEQCLAIDFNIKEIPK 162
           DLM+L+PPLFS KD PEK++ +PS   +LKKK  GVV+ R EM IE CLAIDF IKEIPK
Sbjct: 170 DLMILLPPLFSPKDVPEKLVLRPSMTLNLKKKQEGVVQQRWEMGIEPCLAIDFEIKEIPK 229

Query: 161 KVNWEDSIPRNSDLWQWQTAVCELFEERPIWVKNSLAEHLLDRGLKIGNNILR 3
           KVNWE  IP+ S+ W+WQ AV  LF+ERPIW K +L E LLD+GL +G+  LR
Sbjct: 230 KVNWEQYIPKGSEQWEWQMAVSNLFDERPIWPKGALTERLLDKGLNVGDYTLR 282


>emb|CBI24753.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score =  342 bits (876), Expect = 1e-91
 Identities = 183/331 (55%), Positives = 220/331 (66%), Gaps = 38/331 (11%)
 Frame = -3

Query: 881 MGIIKDGSISGVLPSSSEAFAVHYPGYPSSTQRAIETLGGTQGILKVRAEKSNKLKLHFR 702
           MG+I++GSISG +PS+ EAF+VHYP YPSST RAIETLGGTQ I K R+ +SNKL+LHFR
Sbjct: 1   MGVIEEGSISGYIPSN-EAFSVHYPAYPSSTARAIETLGGTQAIRKARSSQSNKLELHFR 59

Query: 701 PEDPYSHPAFGKLQPCNNFLLRISKKKVKDIQNGSTEHIIEPDHTILASSEVKAQIKDGA 522
           PEDPYSHPAFG+LQPCNN LLRISKKK  D Q+             ++S   K+QI    
Sbjct: 60  PEDPYSHPAFGELQPCNNLLLRISKKKSTDGQSAE-----------VSSKVSKSQISGEV 108

Query: 521 EEQLSMDIVARVSEAYFFDGMVDYQHVLAVHAHTTQRRKRNLADIEPQLEYVDLADVDQE 342
             +L  DI+ARVSEAY F+GMVDYQHVL VHA   +R+KRN A++EP LE  DL DVDQE
Sbjct: 109 PIRLCADIIARVSEAYHFNGMVDYQHVLPVHADVARRKKRNWAEVEPHLEKGDLVDVDQE 168

Query: 341 DLMMLVPPLFSLKDHPEKVIFKPSGDPSLKKKPVGVVKPRSEMKIEQCLAIDFNIKE--- 171
           DLM+L+PPLFS KD PEK++ +PS   +LKKK  GVV+ R EM IE CLAIDF IK+   
Sbjct: 169 DLMILLPPLFSPKDVPEKLVLRPSMTLNLKKKQEGVVQQRWEMGIEPCLAIDFEIKDILI 228

Query: 170 -----------------------------------IPKKVNWEDSIPRNSDLWQWQTAVC 96
                                              IPKKVNWE  IP+ S+ W+WQ AV 
Sbjct: 229 IYCLYRMCITSHMTSFSRIPLKLLVTPLLTKVVEIIPKKVNWEQYIPKGSEQWEWQMAVS 288

Query: 95  ELFEERPIWVKNSLAEHLLDRGLKIGNNILR 3
            LF+ERPIW K +L E LLD+GL +G+  LR
Sbjct: 289 NLFDERPIWPKGALTERLLDKGLNVGDYTLR 319


>ref|XP_003537671.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           [Glycine max]
          Length = 547

 Score =  298 bits (764), Expect = 1e-78
 Identities = 158/294 (53%), Positives = 198/294 (67%), Gaps = 1/294 (0%)
 Frame = -3

Query: 881 MGIIKDGSISGVLPSSSEAFAVHYPGYPSSTQRAIETLGGTQGILKVRAEKSNKLKLHFR 702
           MG+IKDG+ISGVLP   + F VHYP YPSS  RA++TLGG Q I K R  KSNKL+L FR
Sbjct: 1   MGVIKDGTISGVLPEP-QGFMVHYPAYPSSISRAVDTLGGIQAIQKARCSKSNKLELRFR 59

Query: 701 PEDPYSHPAFGKLQPCNNFLLRISKKKVKDIQNGSTEHIIEPDHTILASSEVKAQIKDGA 522
           PEDPYSHPAFG+L+P N+ LL+ISK K              P H   ASS      +D  
Sbjct: 60  PEDPYSHPAFGELRPTNSLLLKISKTKPPP-----------PVHDAEASSSSTNGEQD-Q 107

Query: 521 EEQLSMDIVARVSEAYFFDGMVDYQHVLAVHAHTTQRRKRNLADIEP-QLEYVDLADVDQ 345
           E  L  DIVAR  EAYFF GM DYQHV+ VHA   +R+KRN +++E    +     D+D 
Sbjct: 108 EGSLCADIVARFPEAYFFYGMADYQHVIPVHADVARRKKRNWSELEELHFDKGGFMDLDH 167

Query: 344 EDLMMLVPPLFSLKDHPEKVIFKPSGDPSLKKKPVGVVKPRSEMKIEQCLAIDFNIKEIP 165
           ED+M++VPP+F+ KD PE ++ +P+   S KKKP  VV+P  EM +E  LAIDF+IKEIP
Sbjct: 168 EDVMIIVPPIFAPKDVPENLVLRPATMSSSKKKPEEVVQPHFEMDMEPVLAIDFDIKEIP 227

Query: 164 KKVNWEDSIPRNSDLWQWQTAVCELFEERPIWVKNSLAEHLLDRGLKIGNNILR 3
           KKVNWE+ IP+ SD W+ Q  V  +F+ERPIW KNSL E LLD+GL   +++LR
Sbjct: 228 KKVNWEEYIPQGSDQWELQMVVSRMFDERPIWSKNSLTELLLDKGLSFSHSMLR 281


>ref|XP_003622988.1| General transcription factor 3C polypeptide [Medicago truncatula]
           gi|355498003|gb|AES79206.1| General transcription factor
           3C polypeptide [Medicago truncatula]
          Length = 612

 Score =  280 bits (715), Expect = 5e-73
 Identities = 152/325 (46%), Positives = 203/325 (62%), Gaps = 32/325 (9%)
 Frame = -3

Query: 881 MGIIKDGSISGVLPSSSEAFAVHYPGYPSSTQRAIETLGGTQGILKVRAEKSNKLKLHFR 702
           MG+IKDG+ISGVLP   + F VHYPGYPS+T RA++TLGG+QGILK R+ ++NKL+L FR
Sbjct: 6   MGVIKDGTISGVLPEP-QGFLVHYPGYPSTTSRAVDTLGGSQGILKARSSQANKLELRFR 64

Query: 701 PEDPYSHPAFGKLQPCNNFLLRISKKKVKDIQNGST-------EHIIEPDHTILASSEVK 543
           PEDPY HPAFG+ +P N  LL+ISK+K+ D    +T       EH ++ D+     SE  
Sbjct: 65  PEDPYCHPAFGERRPTNALLLKISKRKLPDDDGATTSNSMCGMEHGMQADN---VESEHG 121

Query: 542 AQIKDGAEEQLSMDIVARVSEAYFFDGMVDYQHVLAVHAHTTQRRKRNLAD-IEPQLEYV 366
           A  K   E  L  DIV RV EAYFF+GM DYQ+V+ VHA   +R+KRN ++  E  L   
Sbjct: 122 AADKVDEEANLCADIVGRVPEAYFFEGMADYQYVVPVHADVAKRKKRNWSEPEETHLAKG 181

Query: 365 DLADVDQEDLMMLVPPLFSLKDHPEKVIFKPSGDPSLKKKPVGVVKPRSEMKIEQCLAID 186
              DVD ED+M++VPP+F+ KD PE ++ +P    S KKK   +V P  E+ +E  LA+D
Sbjct: 182 GRIDVDHEDIMIIVPPIFAPKDMPEDLLLRPPTVSSSKKKEEEIVHPHFEIDMEPVLALD 241

Query: 185 F------------------------NIKEIPKKVNWEDSIPRNSDLWQWQTAVCELFEER 78
           F                         + +IPKKVNWE+ IP+ S+ W+ Q AV  +F+E+
Sbjct: 242 FFQIKDILKENISKHIALLWFSFDLAVLQIPKKVNWEEYIPQGSEQWESQMAVSRMFDEK 301

Query: 77  PIWVKNSLAEHLLDRGLKIGNNILR 3
           PIW KNSL E LLD+GL   + + R
Sbjct: 302 PIWSKNSLTERLLDKGLSFSHGMFR 326


>ref|NP_190510.3| Transcription factor IIIC, subunit 5 [Arabidopsis thaliana]
           gi|332645018|gb|AEE78539.1| Transcription factor IIIC,
           subunit 5 [Arabidopsis thaliana]
          Length = 574

 Score =  280 bits (715), Expect = 5e-73
 Identities = 142/292 (48%), Positives = 191/292 (65%)
 Frame = -3

Query: 881 MGIIKDGSISGVLPSSSEAFAVHYPGYPSSTQRAIETLGGTQGILKVRAEKSNKLKLHFR 702
           MGII++G+ISG LPS  EAF VH+PGYPSS  RAIETLGG QGI + R   SNKL+L FR
Sbjct: 1   MGIIEEGTISGTLPSK-EAFVVHFPGYPSSISRAIETLGGIQGITQARESISNKLELRFR 59

Query: 701 PEDPYSHPAFGKLQPCNNFLLRISKKKVKDIQNGSTEHIIEPDHTILASSEVKAQIKDGA 522
           PEDPY+HPA G+ +PC+ FLLRISK+   DI+   ++ +++    +             A
Sbjct: 60  PEDPYAHPALGEQRPCSGFLLRISKQ---DIKKPESQSVLDTSRDVCLEE---------A 107

Query: 521 EEQLSMDIVARVSEAYFFDGMVDYQHVLAVHAHTTQRRKRNLADIEPQLEYVDLADVDQE 342
              L  DIVAR+SE++ FDGM DYQHV+ +HA   Q++KR   D++P     DL  +  E
Sbjct: 108 SPVLCADIVARLSESFHFDGMADYQHVIPIHADIAQQKKRKWMDVDPLTGKSDLMGLADE 167

Query: 341 DLMMLVPPLFSLKDHPEKVIFKPSGDPSLKKKPVGVVKPRSEMKIEQCLAIDFNIKEIPK 162
           D+MML+P  F+ KD P+ V  KP      KKK     +   E+ +    AIDF++KEIPK
Sbjct: 168 DVMMLLPQFFAPKDIPDNVALKPPATSGPKKKDDAATQNFYEIDVGPVFAIDFSVKEIPK 227

Query: 161 KVNWEDSIPRNSDLWQWQTAVCELFEERPIWVKNSLAEHLLDRGLKIGNNIL 6
           K+ WED + R+S+ WQWQ AV  LFEERPIW ++S+ + LLD+GLK  +++L
Sbjct: 228 KLKWEDFVSRSSNHWQWQVAVSALFEERPIWTRDSVVQRLLDKGLKCTHHML 279


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