BLASTX nr result

ID: Scutellaria22_contig00004664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00004664
         (1692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein o...   432   e-139
ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycin...   431   e-137
ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [P...   421   e-135
ref|XP_002510744.1| chlorophyll A/B binding protein, putative [R...   423   e-135
ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein o...   423   e-135

>ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
            chloroplastic [Vitis vinifera]
            gi|297745621|emb|CBI40786.3| unnamed protein product
            [Vitis vinifera]
          Length = 331

 Score =  432 bits (1112), Expect(2) = e-139
 Identities = 200/225 (88%), Positives = 211/225 (93%)
 Frame = +2

Query: 416  SMWYGADRPRWLGPITYDYPAYLTGELPGDYGFDIAGLSRDPVALQKYFNFEVLHARWAM 595
            S+WYG +RPRWLGPI YDYPAYLTGELPGDYGFDIAGL +DPVA QKYFNFE+LHARWAM
Sbjct: 107  SLWYGEERPRWLGPIPYDYPAYLTGELPGDYGFDIAGLGKDPVAFQKYFNFEILHARWAM 166

Query: 596  LAALGALIPEVLDLTGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGLHVAGSQGVVIIAIC 775
            LAALGAL+PE+LDL GAFHFVEPVWWRVGYSKLKGDTLDYLGIPG H AGSQGV++IAIC
Sbjct: 167  LAALGALLPELLDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGFHFAGSQGVIVIAIC 226

Query: 776  QALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKN 955
            QALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDP AFEELKVKEIKN
Sbjct: 227  QALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKN 286

Query: 956  GRLAMVAWLGFYTQAALTGKGPIQNLLEHITDPFHNNLLSTMKPL 1090
            GRLAMVAWLGFY QAA TGKGP+QNLL+H+ DPFHNNLLS  K L
Sbjct: 287  GRLAMVAWLGFYIQAAATGKGPVQNLLDHLADPFHNNLLSIFKAL 331



 Score = 92.4 bits (228), Expect(2) = e-139
 Identities = 47/70 (67%), Positives = 56/70 (80%)
 Frame = +1

Query: 127 NFHPTQPFSRFKASWQEVAGVLVFSAIPFTAVKAIANSRVGEELQRRMEEKKQLYRDNSS 306
           N + T  +S  KASWQE+AGVL+FSAIPFTAVKAIANS +GE LQ RMEE K+    NSS
Sbjct: 35  NVNSTSTYSGCKASWQELAGVLIFSAIPFTAVKAIANSPLGESLQSRMEENKKAAVKNSS 94

Query: 307 KFKALSDKAR 336
           KFKAL++KA+
Sbjct: 95  KFKALAEKAK 104


>ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycine max]
            gi|255636882|gb|ACU18774.1| unknown [Glycine max]
          Length = 331

 Score =  431 bits (1108), Expect(2) = e-137
 Identities = 198/222 (89%), Positives = 213/222 (95%)
 Frame = +2

Query: 416  SMWYGADRPRWLGPITYDYPAYLTGELPGDYGFDIAGLSRDPVALQKYFNFEVLHARWAM 595
            S WYG DRPRWLGPI+Y+YP+YLTGELPGDYGFDIAGL +DPVALQKYFNFE+LHARWAM
Sbjct: 103  SFWYGEDRPRWLGPISYEYPSYLTGELPGDYGFDIAGLGQDPVALQKYFNFEILHARWAM 162

Query: 596  LAALGALIPEVLDLTGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGLHVAGSQGVVIIAIC 775
            LA++GALIPE+LDL GAFHFVEPVWWRVGYSKLKGDTLDYLGI GLH AGSQGVV+IAIC
Sbjct: 163  LASVGALIPEILDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIQGLHFAGSQGVVVIAIC 222

Query: 776  QALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKN 955
            QALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLS DPEAFEELKVKEIKN
Sbjct: 223  QALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSNDPEAFEELKVKEIKN 282

Query: 956  GRLAMVAWLGFYTQAALTGKGPIQNLLEHITDPFHNNLLSTM 1081
            GRLAMVAWLGFY QAALTGKGP+QNL++HI+DPFHNNLL ++
Sbjct: 283  GRLAMVAWLGFYVQAALTGKGPVQNLIDHISDPFHNNLLGSL 324



 Score = 85.5 bits (210), Expect(2) = e-137
 Identities = 43/58 (74%), Positives = 50/58 (86%)
 Frame = +1

Query: 163 ASWQEVAGVLVFSAIPFTAVKAIANSRVGEELQRRMEEKKQLYRDNSSKFKALSDKAR 336
           ASWQE+AGVL+FSAIPFTAVKAIANS +GE LQR+MEE+K    +NSS FKAL+ KAR
Sbjct: 43  ASWQELAGVLLFSAIPFTAVKAIANSPLGESLQRKMEERKTFAVENSSTFKALAGKAR 100


>ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa]
            gi|222856453|gb|EEE94000.1| light-harvesting complex II
            protein Lhcb7 [Populus trichocarpa]
          Length = 338

 Score =  421 bits (1083), Expect(2) = e-135
 Identities = 191/223 (85%), Positives = 209/223 (93%)
 Frame = +2

Query: 416  SMWYGADRPRWLGPITYDYPAYLTGELPGDYGFDIAGLSRDPVALQKYFNFEVLHARWAM 595
            S WYG +RPRWLGPI+Y YP YL+GELPGDYGFD+AGL+ DPVA Q+YFNFE+LHARWAM
Sbjct: 114  SFWYGEERPRWLGPISYQYPTYLSGELPGDYGFDVAGLAEDPVAFQRYFNFEILHARWAM 173

Query: 596  LAALGALIPEVLDLTGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGLHVAGSQGVVIIAIC 775
            LAALGALIPEVLDL+GAFHF+EPVWWRVGYSKLKGDTLDYLGIPGLH AG QGV++IA C
Sbjct: 174  LAALGALIPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGGQGVLVIAFC 233

Query: 776  QALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKN 955
            QA+LMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLSKDP +FEELKVKEIKN
Sbjct: 234  QAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGILFDPLNLSKDPVSFEELKVKEIKN 293

Query: 956  GRLAMVAWLGFYTQAALTGKGPIQNLLEHITDPFHNNLLSTMK 1084
            GRLAMVAWLGFY QAALTGKGP++NL+EHI+DP HNNL ST+K
Sbjct: 294  GRLAMVAWLGFYIQAALTGKGPVENLVEHISDPLHNNLFSTLK 336



 Score = 90.5 bits (223), Expect(2) = e-135
 Identities = 46/64 (71%), Positives = 54/64 (84%)
 Frame = +1

Query: 145 PFSRFKASWQEVAGVLVFSAIPFTAVKAIANSRVGEELQRRMEEKKQLYRDNSSKFKALS 324
           P S  KASWQE+AGV++FSAIPFTAVKAIANS +GE LQRR+EE+K+L    SSKFKAL+
Sbjct: 48  PASICKASWQELAGVVIFSAIPFTAVKAIANSPLGESLQRRLEERKKLAVQQSSKFKALA 107

Query: 325 DKAR 336
            KAR
Sbjct: 108 QKAR 111


>ref|XP_002510744.1| chlorophyll A/B binding protein, putative [Ricinus communis]
            gi|223551445|gb|EEF52931.1| chlorophyll A/B binding
            protein, putative [Ricinus communis]
          Length = 329

 Score =  423 bits (1087), Expect(2) = e-135
 Identities = 195/223 (87%), Positives = 209/223 (93%)
 Frame = +2

Query: 416  SMWYGADRPRWLGPITYDYPAYLTGELPGDYGFDIAGLSRDPVALQKYFNFEVLHARWAM 595
            S+WYG +RPRWLGPI YDYPAYLTGELPGDYGFD+AGLS+D VA Q+YFNFE+LHARWAM
Sbjct: 105  SLWYGEERPRWLGPIPYDYPAYLTGELPGDYGFDVAGLSKDSVAFQRYFNFEILHARWAM 164

Query: 596  LAALGALIPEVLDLTGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGLHVAGSQGVVIIAIC 775
            LAALGAL PEVLDL+GAFHF+EPVWWRVGYSKLKGDTLDYLGIPGLH AGSQGV++IAIC
Sbjct: 165  LAALGALAPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGSQGVLVIAIC 224

Query: 776  QALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKN 955
            QALLMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLS D  A EELKVKEIKN
Sbjct: 225  QALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGPLFDPLNLSSDAVALEELKVKEIKN 284

Query: 956  GRLAMVAWLGFYTQAALTGKGPIQNLLEHITDPFHNNLLSTMK 1084
            GRLAMVAWLGFY QAALTGKGP+QNL+EHI+DPFHNNLL  +K
Sbjct: 285  GRLAMVAWLGFYAQAALTGKGPVQNLVEHISDPFHNNLLCVLK 327



 Score = 88.2 bits (217), Expect(2) = e-135
 Identities = 48/74 (64%), Positives = 58/74 (78%)
 Frame = +1

Query: 115 KNLHNFHPTQPFSRFKASWQEVAGVLVFSAIPFTAVKAIANSRVGEELQRRMEEKKQLYR 294
           K L N +P+ P    KASWQE+AGVLVFSAIPFTAVKA+ANS +GE LQRR+EE K++  
Sbjct: 32  KILFNGNPSSPC---KASWQELAGVLVFSAIPFTAVKALANSPLGESLQRRLEESKKVAV 88

Query: 295 DNSSKFKALSDKAR 336
             SSKF+AL+ KAR
Sbjct: 89  KESSKFQALTAKAR 102


>ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
            chloroplastic-like [Cucumis sativus]
          Length = 338

 Score =  423 bits (1088), Expect(2) = e-135
 Identities = 192/222 (86%), Positives = 208/222 (93%)
 Frame = +2

Query: 416  SMWYGADRPRWLGPITYDYPAYLTGELPGDYGFDIAGLSRDPVALQKYFNFEVLHARWAM 595
            S WYG +RPRWLGP+ YDYP YLTGELPGDYGFDIAGLS DPVA QK+FNFE+LHARWAM
Sbjct: 111  SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAM 170

Query: 596  LAALGALIPEVLDLTGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGLHVAGSQGVVIIAIC 775
            LA+LGAL+PE+LD+ GAFHF EP+WWRVGYSKLKGDTLDYLGIPGLH+AGSQGV++IAIC
Sbjct: 171  LASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAIC 230

Query: 776  QALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKN 955
            QA+LMVGPEYARYCGIEALEPLGIYLPGDINYPGG LFDPLNLSKD EAFEELKVKEIKN
Sbjct: 231  QAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAEAFEELKVKEIKN 290

Query: 956  GRLAMVAWLGFYTQAALTGKGPIQNLLEHITDPFHNNLLSTM 1081
            GRLAMVAWLGFY+QAALTGKGP+QNLL HI DPFHNN LS +
Sbjct: 291  GRLAMVAWLGFYSQAALTGKGPVQNLLNHIADPFHNNFLSLL 332



 Score = 87.4 bits (215), Expect(2) = e-135
 Identities = 46/76 (60%), Positives = 57/76 (75%)
 Frame = +1

Query: 109 TAKNLHNFHPTQPFSRFKASWQEVAGVLVFSAIPFTAVKAIANSRVGEELQRRMEEKKQL 288
           T  NL + H     S  +ASWQE+AGVL+FSAIPFTAVKAIANS +G  LQR++E+KK  
Sbjct: 33  TTLNLRSNHSISHRSTCRASWQELAGVLIFSAIPFTAVKAIANSPLGGSLQRQLEKKKNS 92

Query: 289 YRDNSSKFKALSDKAR 336
              NSSKFKAL+++AR
Sbjct: 93  AVANSSKFKALAEEAR 108


Top