BLASTX nr result
ID: Scutellaria22_contig00003425
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria22_contig00003425
(349 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565787.1| light-harvesting complex II chlorophyll a/b bin... 211 1e-57
ref|XP_002879498.1| LHB1B1 [Arabidopsis lyrata subsp. lyrata] gi... 211 1e-57
ref|NP_565786.1| light-harvesting complex II chlorophyll a/b bin... 211 1e-57
ref|XP_002893588.1| hypothetical protein ARALYDRAFT_473203 [Arab... 211 1e-57
ref|XP_002890838.1| hypothetical protein ARALYDRAFT_473204 [Arab... 211 1e-57
>ref|NP_565787.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
gi|11908034|gb|AAG41446.1|AF326864_1 putative
photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|12642854|gb|AAK00369.1|AF339687_1 putative
photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana] gi|16366|emb|CAA45789.1|
photosystem II type I chlorophyll a /b binding protein
[Arabidopsis thaliana] gi|3128229|gb|AAC26709.1|
putative photosystem II type I chlorophyll a/b binding
protein [Arabidopsis thaliana]
gi|20197164|gb|AAM14951.1| putative photosystem II type
I chlorophyll a b binding protein [Arabidopsis thaliana]
gi|21539563|gb|AAM53334.1| putative photosystem II type
I chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|25083751|gb|AAN72114.1| putative photosystem II type
I chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|330253879|gb|AEC08973.1| light-harvesting complex II
chlorophyll a/b binding protein 1 [Arabidopsis thaliana]
Length = 266
Score = 211 bits (537), Expect(2) = 1e-57
Identities = 101/108 (93%), Positives = 103/108 (95%)
Frame = -1
Query: 325 LGPVLR*APSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 146
LGP PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEL
Sbjct: 58 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 117
Query: 145 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQV 2
LARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQV
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQV 165
Score = 37.0 bits (84), Expect(2) = 1e-57
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 348 YGPDRVKYLGPFSGEP 301
YG DRVKYLGPFSGEP
Sbjct: 50 YGSDRVKYLGPFSGEP 65
>ref|XP_002879498.1| LHB1B1 [Arabidopsis lyrata subsp. lyrata]
gi|297325337|gb|EFH55757.1| LHB1B1 [Arabidopsis lyrata
subsp. lyrata]
Length = 266
Score = 211 bits (537), Expect(2) = 1e-57
Identities = 101/108 (93%), Positives = 103/108 (95%)
Frame = -1
Query: 325 LGPVLR*APSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 146
LGP PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEL
Sbjct: 58 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 117
Query: 145 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQV 2
LARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQV
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQV 165
Score = 37.0 bits (84), Expect(2) = 1e-57
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 348 YGPDRVKYLGPFSGEP 301
YG DRVKYLGPFSGEP
Sbjct: 50 YGSDRVKYLGPFSGEP 65
>ref|NP_565786.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
gi|13926260|gb|AAK49602.1|AF372886_1 At2g34420/T31E10.24
[Arabidopsis thaliana]
gi|16226426|gb|AAL16165.1|AF428397_1 At2g34420/T31E10.24
[Arabidopsis thaliana]
gi|16930391|gb|AAL31882.1|AF419548_1 At2g34420/T31E10.24
[Arabidopsis thaliana]
gi|16930467|gb|AAL31919.1|AF419587_1 At2g34420/T31E10.24
[Arabidopsis thaliana] gi|16364|emb|CAA45790.1|
photosystem II type I chlorophyll a /b binding protein
[Arabidopsis thaliana] gi|3128230|gb|AAC26710.1|
photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana] gi|14517452|gb|AAK62616.1|
At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|15027899|gb|AAK76480.1| putative photosystem II type
I chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|17473689|gb|AAL38301.1| photosystem II type I
chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|19310503|gb|AAL84985.1| At2g34420/T31E10.24
[Arabidopsis thaliana] gi|19310521|gb|AAL84994.1|
At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|20148517|gb|AAM10149.1| photosystem II type I
chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|20197168|gb|AAM14954.1| photosystem II type I
chlorophyll a b binding protein [Arabidopsis thaliana]
gi|23296426|gb|AAN13114.1| putative photosystem II type
I chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|110739111|dbj|BAF01472.1| photosystem II type I
chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|330253878|gb|AEC08972.1| light-harvesting complex II
chlorophyll a/b binding protein 1 [Arabidopsis thaliana]
Length = 265
Score = 211 bits (537), Expect(2) = 1e-57
Identities = 101/108 (93%), Positives = 103/108 (95%)
Frame = -1
Query: 325 LGPVLR*APSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 146
LGP PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEL
Sbjct: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 116
Query: 145 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQV 2
LARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQV
Sbjct: 117 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQV 164
Score = 37.0 bits (84), Expect(2) = 1e-57
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 348 YGPDRVKYLGPFSGEP 301
YG DRVKYLGPFSGEP
Sbjct: 49 YGSDRVKYLGPFSGEP 64
>ref|XP_002893588.1| hypothetical protein ARALYDRAFT_473203 [Arabidopsis lyrata subsp.
lyrata] gi|297339430|gb|EFH69847.1| hypothetical protein
ARALYDRAFT_473203 [Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 211 bits (537), Expect(2) = 1e-57
Identities = 101/108 (93%), Positives = 103/108 (95%)
Frame = -1
Query: 325 LGPVLR*APSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 146
LGP PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEL
Sbjct: 54 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 113
Query: 145 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQV 2
LARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQV
Sbjct: 114 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQV 161
Score = 37.0 bits (84), Expect(2) = 1e-57
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 348 YGPDRVKYLGPFSGEP 301
YG DRVKYLGPFSGEP
Sbjct: 46 YGSDRVKYLGPFSGEP 61
>ref|XP_002890838.1| hypothetical protein ARALYDRAFT_473204 [Arabidopsis lyrata subsp.
lyrata] gi|297336680|gb|EFH67097.1| hypothetical protein
ARALYDRAFT_473204 [Arabidopsis lyrata subsp. lyrata]
Length = 262
Score = 211 bits (537), Expect(2) = 1e-57
Identities = 101/108 (93%), Positives = 103/108 (95%)
Frame = -1
Query: 325 LGPVLR*APSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 146
LGP PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEL
Sbjct: 54 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 113
Query: 145 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQV 2
LARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWATQV
Sbjct: 114 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQV 161
Score = 37.0 bits (84), Expect(2) = 1e-57
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 348 YGPDRVKYLGPFSGEP 301
YG DRVKYLGPFSGEP
Sbjct: 46 YGSDRVKYLGPFSGEP 61