BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00003057
         (4051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR08426.1| phytochrome A [Orobanche minor]                       1819   0.0  
gb|ABA46868.1| phytochrome A [Solanum tuberosum]                     1808   0.0  
sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb...  1803   0.0  
ref|NP_001234490.1| alternative transcript type 3 [Solanum lycop...  1803   0.0  
sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|e...  1800   0.0  

>gb|AAR08426.1| phytochrome A [Orobanche minor]
          Length = 1123

 Score = 1819 bits (4712), Expect = 0.0
 Identities = 905/1119 (80%), Positives = 1002/1119 (89%), Gaps = 5/1119 (0%)
 Frame = -2

Query: 3621 SKQPGQSSINSARSRHSARVVAQTSIDAKLHAXXXXXXXXXXXXXSVRVTNVD---QRPK 3451
            S QPG+SS NSA+SR SAR++AQTSIDAKL A             SVRVTN       P+
Sbjct: 3    SSQPGRSSTNSAQSRQSARIIAQTSIDAKLDADFEESGSSFDYSTSVRVTNYPAGLSEPR 62

Query: 3450 PDKVTTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEHPV 3271
             DKVTT YLHQIQKGK IQ FGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVG+HP+
Sbjct: 63   SDKVTTAYLHQIQKGKLIQQFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPL 122

Query: 3270 LGIGSDIRNVFTAPSAAALHKALGFGEVSLLNPVLVHCKTSGKPFYAIIHRVTGSLIIDF 3091
            LGIGSDIR +FTAPSAAAL KALGFGEVSLLNP+LVHCKTSGKPFYAIIHRVTGSLIIDF
Sbjct: 123  LGIGSDIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDF 182

Query: 3090 EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVMIY 2911
            EPVKPHEVPMTAAGALQSYKLAAKAI  LQ+LP GSIERLCDTMVQ+VFELTGYDRVMIY
Sbjct: 183  EPVKPHEVPMTAAGALQSYKLAAKAIACLQALPGGSIERLCDTMVQQVFELTGYDRVMIY 242

Query: 2910 KFHDDDHGEVLTEVTKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2731
            KFH+DDHGEV TE+TKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ
Sbjct: 243  KFHEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 302

Query: 2730 DENLPIELTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEGSDSTH-PERRKR 2554
            D+NLP +LTLCGSTLRAPH CH QYMENMNSIASLVMSVVVNEGDE+G DS+  P +RKR
Sbjct: 303  DDNLPFDLTLCGSTLRAPHGCHSQYMENMNSIASLVMSVVVNEGDEDGPDSSSGPYKRKR 362

Query: 2553 LWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDML 2374
            LWGLVVCH+T PRF+PFPLRYACEFL QVF+IHVNKELELENQMLEKNILRTQTLLCD+L
Sbjct: 363  LWGLVVCHNTCPRFIPFPLRYACEFLVQVFSIHVNKELELENQMLEKNILRTQTLLCDLL 422

Query: 2373 LRDAPLGIVSQSPNVMDLVKCDGAVLIYKNKKYRLGITPNDFQVRDIVSWLDEYHRDSTG 2194
            LRD PLGIVSQSPNVMDLVKCDGA+L++K  KYRLG+TP DFQ+RDIVSWLDEYH+DSTG
Sbjct: 423  LRDVPLGIVSQSPNVMDLVKCDGAILLHKRTKYRLGLTPTDFQIRDIVSWLDEYHQDSTG 482

Query: 2193 LSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLIWFRSHTAAEVRWGGAKHDPGEKDD 2014
            LSTDSLYDAGFPGALALG+A+CGMAAVKITD+DWL WFRSHTAAE+RWGGAKH+   KDD
Sbjct: 483  LSTDSLYDAGFPGALALGNALCGMAAVKITDEDWLFWFRSHTAAEIRWGGAKHELEAKDD 542

Query: 2013 GRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAFKEADYLESDTKAIHTKL 1834
            GRKMHPRSSF+AFLEVVKTRSLPWKD+EMD IHSLQLILRNA+KE++  + +++ IH +L
Sbjct: 543  GRKMHPRSSFRAFLEVVKTRSLPWKDYEMDGIHSLQLILRNAYKESEEKDLESREIHARL 602

Query: 1833 NDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLPVDEATGKH 1654
            N+LQIDG++E+EAVTSEMVRLIETA+VPI +V VDGLVNGWNTKI+DLTGL V EA G H
Sbjct: 603  NELQIDGVKEIEAVTSEMVRLIETATVPIFSVGVDGLVNGWNTKISDLTGLSVVEAIGMH 662

Query: 1653 FLTLVEESSADSVSKMLQLALEGKEERNVQFEIKTHGRRSESGPISLVVNACASRDIKDN 1474
            FL LVE+SSAD+VSKML LAL+GKEE +VQFEIKTHG+RSESGPISL+VNACAS+D+K+N
Sbjct: 663  FLALVEDSSADTVSKMLGLALQGKEEHDVQFEIKTHGQRSESGPISLIVNACASKDVKEN 722

Query: 1473 VVGVCFIAQDVTAQKNMMDKFTKIEGDYRAXXXXXXXXXXXIFGTDEFGWCSEWNAAMTK 1294
            VVGVCFIAQD+T QK+MMDKFT+IEGDYR+           IFGTDEFGWCSEWNAAM K
Sbjct: 723  VVGVCFIAQDITTQKSMMDKFTRIEGDYRSIIQNPNPLIPPIFGTDEFGWCSEWNAAMIK 782

Query: 1293 LSGWSRDDVINKMLLGEIFGMNRACCRLKNQEAFVNLGIVLNNAVTGQDNEKLPFGFFSR 1114
            LSGW R+ VI+KMLLGE+FG+N+ACCRLKNQEA+VNLG+VLNN VTGQ++ K+ FGFFSR
Sbjct: 783  LSGWGREAVIDKMLLGEVFGLNKACCRLKNQEAYVNLGVVLNNTVTGQESGKVSFGFFSR 842

Query: 1113 TGKYVECLLCVSKKLDEEGVVTGVFCFXXXXXXXXXXXLHVQRLSEQTALKRLRVLSYIR 934
            +GKYV CLLCVSKK+D EG VTG+FCF           LH+QR+SEQTA KRLRVL+YIR
Sbjct: 843  SGKYVACLLCVSKKVDSEGSVTGLFCFLQLASPELQQALHIQRISEQTASKRLRVLAYIR 902

Query: 933  REIRNPLSGIIFSRKMMEGTNLDDEQKNLLRTSVYCQRQLNKILDDTDLDHIIEGYLDLE 754
            REIR+PLSGIIFSRK+MEGT+L+DEQKN++RTS++CQ Q+NKIL+DTDLDHIIEGYLDLE
Sbjct: 903  REIRSPLSGIIFSRKLMEGTDLNDEQKNIVRTSLHCQSQMNKILEDTDLDHIIEGYLDLE 962

Query: 753  MVEFKLHEVLIVSISQVMLKSNGKGIMIVDNLPPNLSTETLYGDSLRLQQVLAAFLLTAV 574
            MVEFKLHEVLI SISQV+ KSNGKGI IVDNL PNLS ETLYGDSLRLQQVLAAFLL AV
Sbjct: 963  MVEFKLHEVLIASISQVISKSNGKGIKIVDNLAPNLSNETLYGDSLRLQQVLAAFLLIAV 1022

Query: 573  TSTPSGGQLAIAASMTKDSIGESVQLGHLEFRITHTGGGVPQELLNQMFGD-AVDASEDG 397
             STPSGGQL +AA++ KDSIGE VQLG LE RITH GGGVPQE+LNQMFGD   DASEDG
Sbjct: 1023 DSTPSGGQLGVAATLAKDSIGEFVQLGRLECRITH-GGGVPQEILNQMFGDEPTDASEDG 1081

Query: 396  ISLFISRKLVKLMNGEVQYLREAGRSTFIISVELAISNK 280
            ISLFISRKLVKLM G++QYLREAGRSTFIISVE+AISNK
Sbjct: 1082 ISLFISRKLVKLMKGDIQYLREAGRSTFIISVEIAISNK 1120


>gb|ABA46868.1| phytochrome A [Solanum tuberosum]
          Length = 1123

 Score = 1808 bits (4684), Expect = 0.0
 Identities = 892/1119 (79%), Positives = 999/1119 (89%), Gaps = 5/1119 (0%)
 Frame = -2

Query: 3621 SKQPGQSSINSARSRHSARVVAQTSIDAKLHAXXXXXXXXXXXXXSVRVTNV---DQRPK 3451
            S +P QSS  S+RS+HSAR++AQTSIDAKLHA             SVRVT+V   ++RPK
Sbjct: 3    SSRPSQSSATSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEERPK 62

Query: 3450 PDKVTTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEHPV 3271
             DKVTT YLHQIQKGK IQPFG LLALDEKT +VIA+SENAPEMLTMVSHAVPSVGEHPV
Sbjct: 63   SDKVTTAYLHQIQKGKFIQPFGSLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPV 122

Query: 3270 LGIGSDIRNVFTAPSAAALHKALGFGEVSLLNPVLVHCKTSGKPFYAIIHRVTGSLIIDF 3091
            LGIG+DIR +FT PS AAL KALGFGEVSLLNPVLVHCK SGKPFYAI+HRVTGSLIIDF
Sbjct: 123  LGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDF 182

Query: 3090 EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVMIY 2911
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTMVQEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGY 242

Query: 2910 KFHDDDHGEVLTEVTKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2731
            KFHDDDHGEV++E+TKPGLEPY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKVVQ
Sbjct: 243  KFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 2730 DENLPIELTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEG--SDSTHPERRK 2557
            DE LP +LTLCGSTLRAPH CHLQYMENMNS+ASLVM+VVVN+GDEEG  SDS+  ++RK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMNSVASLVMAVVVNDGDEEGESSDSSQSQKRK 362

Query: 2556 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 2377
            RLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELENQ LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDM 422

Query: 2376 LLRDAPLGIVSQSPNVMDLVKCDGAVLIYKNKKYRLGITPNDFQVRDIVSWLDEYHRDST 2197
            L+RDAPLGIVSQSPN+MDLVKCDGA L+YKNK +RLG+ P+DFQ+ DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDST 482

Query: 2196 GLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLIWFRSHTAAEVRWGGAKHDPGEKD 2017
            GLSTDSLYDAGFPGALALGDAVCGMAAV+I+DKDWL W+RSHTAAEVRWGGAKH+PGEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKD 542

Query: 2016 DGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAFKEADYLESDTKAIHTK 1837
            DGRKMHPRSSFKAFLEVVKTRS+PWKD+EMDAIHSLQLILRNAFK+AD + S+T +IHTK
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTNSIHTK 602

Query: 1836 LNDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLPVDEATGK 1657
            LNDL+IDG+QELEAVT+EM+RLIETASVPI AVDVDG VNGWNTK+A+LTGLPVDEA GK
Sbjct: 603  LNDLRIDGMQELEAVTAEMIRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGK 662

Query: 1656 HFLTLVEESSADSVSKMLQLALEGKEERNVQFEIKTHGRRSESGPISLVVNACASRDIKD 1477
            H LTLVE+SS D+V+KML+LAL+GKEERNV+FEIK HG   +S PISL+VNACAS+D++D
Sbjct: 663  HLLTLVEDSSVDTVNKMLELALQGKEERNVEFEIKAHGPSRDSSPISLIVNACASKDVRD 722

Query: 1476 NVVGVCFIAQDVTAQKNMMDKFTKIEGDYRAXXXXXXXXXXXIFGTDEFGWCSEWNAAMT 1297
            +VVGVCFIAQD+T QK++MDKFT+IEGDYRA           IFGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 1296 KLSGWSRDDVINKMLLGEIFGMNRACCRLKNQEAFVNLGIVLNNAVTGQDNEKLPFGFFS 1117
            KL+GW RDDV++KMLLGE+FG   ACCRLKNQEAFVN G++LNNA+TGQ++EK+PFGFF 
Sbjct: 783  KLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFG 842

Query: 1116 RTGKYVECLLCVSKKLDEEGVVTGVFCFXXXXXXXXXXXLHVQRLSEQTALKRLRVLSYI 937
            R GKYVECLLCVSK+LD+EG VTG+FCF           LHVQRLSEQTALKRL+VL+YI
Sbjct: 843  RYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYI 902

Query: 936  RREIRNPLSGIIFSRKMMEGTNLDDEQKNLLRTSVYCQRQLNKILDDTDLDHIIEGYLDL 757
            RR+I+NPLSGIIFS KM+EGT+L +EQKN+L TS  CQRQLNKILDDTDLD IIEGYLDL
Sbjct: 903  RRQIKNPLSGIIFSWKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIEGYLDL 962

Query: 756  EMVEFKLHEVLIVSISQVMLKSNGKGIMIVDNLPPNLSTETLYGDSLRLQQVLAAFLLTA 577
            EM+EFKLHEVL+ SISQVM+KSNGK IMI +++  +L  ETLYGDS RLQQVLA FLL +
Sbjct: 963  EMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVS 1022

Query: 576  VTSTPSGGQLAIAASMTKDSIGESVQLGHLEFRITHTGGGVPQELLNQMFGDAVDASEDG 397
            V STPSGGQL+I+  +TKD IGESVQL  LEFRI HTGGGVP+ELL+QM G  VDASE+G
Sbjct: 1023 VNSTPSGGQLSISGRLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMLGSEVDASEEG 1082

Query: 396  ISLFISRKLVKLMNGEVQYLREAGRSTFIISVELAISNK 280
            I L +SRKLVKLMNGEVQYLREAGRSTFIISVELA++ K
Sbjct: 1083 IFLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVATK 1121


>sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb|AAB21533.2| type A
            phytochrome [Solanum tuberosum]
          Length = 1123

 Score = 1803 bits (4670), Expect = 0.0
 Identities = 891/1119 (79%), Positives = 997/1119 (89%), Gaps = 5/1119 (0%)
 Frame = -2

Query: 3621 SKQPGQSSINSARSRHSARVVAQTSIDAKLHAXXXXXXXXXXXXXSVRVTNV---DQRPK 3451
            S +P QSS  S+RS+HSAR++AQTSIDAKLHA             SVRVTNV   +QRPK
Sbjct: 3    SSRPSQSSTTSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQRPK 62

Query: 3450 PDKVTTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEHPV 3271
             DKVTT YLHQIQKGK IQPFGCLLALDEKT +VIA+SENAPEMLTMVSHAVPSVGEHPV
Sbjct: 63   SDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPV 122

Query: 3270 LGIGSDIRNVFTAPSAAALHKALGFGEVSLLNPVLVHCKTSGKPFYAIIHRVTGSLIIDF 3091
            LGIG DIR +FT PS AAL KALGFGEVSLLNPVLVHCK SGKPFYAI+HRVTGSLIIDF
Sbjct: 123  LGIGIDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDF 182

Query: 3090 EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVMIY 2911
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTMVQEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGY 242

Query: 2910 KFHDDDHGEVLTEVTKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2731
            KFHDDDHGEV++E+TKPGLEPY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKVVQ
Sbjct: 243  KFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 2730 DENLPIELTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEG--SDSTHPERRK 2557
            DE LP +LTLCGSTLRAPH CHLQYMENMNSIASLVM+VVVN+GDEEG  SDS+  ++RK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRK 362

Query: 2556 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 2377
            RLWGLVV H+T+PRF PFPLRYACEFLAQVFAI VNKELELENQ LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVSHNTTPRFAPFPLRYACEFLAQVFAILVNKELELENQFLEKNILRTQTLLCDM 422

Query: 2376 LLRDAPLGIVSQSPNVMDLVKCDGAVLIYKNKKYRLGITPNDFQVRDIVSWLDEYHRDST 2197
            L+RDAPLGIVSQSPN+MDL+KCDGA L+YKNK +RLG+ P+DFQ+ DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDST 482

Query: 2196 GLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLIWFRSHTAAEVRWGGAKHDPGEKD 2017
            GLSTDSLYDAGFPGALALGDAVCGMAAV+I+DKDWL W+RSHTAAEVRWGGAKH+PGEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKD 542

Query: 2016 DGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAFKEADYLESDTKAIHTK 1837
            DGRKMHPRSSFK FLEVVKTRS+PWKD+EMD IHSLQLILRNAFK+AD + S+T +IHTK
Sbjct: 543  DGRKMHPRSSFKGFLEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIHTK 602

Query: 1836 LNDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLPVDEATGK 1657
            LNDL+IDG+QELEAVT+EMVRLIETASVPI AVDVDG VNGWNTK+A+LTGLPVDEA GK
Sbjct: 603  LNDLKIDGMQELEAVTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGK 662

Query: 1656 HFLTLVEESSADSVSKMLQLALEGKEERNVQFEIKTHGRRSESGPISLVVNACASRDIKD 1477
            H LTLVE+SS D+V+KML+LAL+G+EERNV+FEIKTHG   +S PISL+VNACAS+D++D
Sbjct: 663  HLLTLVEDSSVDTVNKMLELALQGQEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRD 722

Query: 1476 NVVGVCFIAQDVTAQKNMMDKFTKIEGDYRAXXXXXXXXXXXIFGTDEFGWCSEWNAAMT 1297
            +VVGVCFIAQD+T QK++MDKFT+IEGDYRA           IFGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 1296 KLSGWSRDDVINKMLLGEIFGMNRACCRLKNQEAFVNLGIVLNNAVTGQDNEKLPFGFFS 1117
             L+GW RDDV++KMLLGE+FG   ACCRLKNQEAFVN G++LNNA+TGQ++EK+PFGFF+
Sbjct: 783  MLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFA 842

Query: 1116 RTGKYVECLLCVSKKLDEEGVVTGVFCFXXXXXXXXXXXLHVQRLSEQTALKRLRVLSYI 937
            R GKYVECLLCVSK+LD+EG VTG+FCF           LHVQRLSEQTALKRL+VL+YI
Sbjct: 843  RYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYI 902

Query: 936  RREIRNPLSGIIFSRKMMEGTNLDDEQKNLLRTSVYCQRQLNKILDDTDLDHIIEGYLDL 757
            RR+IRNPLSGIIFSRKM+EGT+L +EQKN+L TS  CQRQL+KILDDTDLD IIEGYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGYLDL 962

Query: 756  EMVEFKLHEVLIVSISQVMLKSNGKGIMIVDNLPPNLSTETLYGDSLRLQQVLAAFLLTA 577
            EM+EFKLHEVL+ SISQVM+KSNGK IMI +++  +L  ETLYGDS RLQQVLA FLL +
Sbjct: 963  EMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVS 1022

Query: 576  VTSTPSGGQLAIAASMTKDSIGESVQLGHLEFRITHTGGGVPQELLNQMFGDAVDASEDG 397
            V STPSGG+L+I+  +TKD IGESVQL  LEFRI HTGGGVP+ELL+QMFG   DASE+G
Sbjct: 1023 VNSTPSGGKLSISGKLTKDRIGESVQLALLEFRIRHTGGGVPEELLSQMFGSEADASEEG 1082

Query: 396  ISLFISRKLVKLMNGEVQYLREAGRSTFIISVELAISNK 280
            ISL +SRKLVKLMNGEVQYLREAGRSTFIISVELA++ K
Sbjct: 1083 ISLLVSRKLVKLMNGEVQYLREAGRSTFIISVELAVATK 1121


>ref|NP_001234490.1| alternative transcript type 3 [Solanum lycopersicum]
            gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
            gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
            gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
            gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
          Length = 1123

 Score = 1803 bits (4670), Expect = 0.0
 Identities = 889/1117 (79%), Positives = 1000/1117 (89%), Gaps = 5/1117 (0%)
 Frame = -2

Query: 3621 SKQPGQSSINSARSRHSARVVAQTSIDAKLHAXXXXXXXXXXXXXSVRVTNV---DQRPK 3451
            S +P QSS  S+RS+HSAR+VAQTSIDAKLHA             SVRVT+V   +++PK
Sbjct: 3    SSRPSQSSTTSSRSKHSARIVAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEEKPK 62

Query: 3450 PDKVTTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEHPV 3271
             DKVTT YLHQIQKGK IQPFGCLLALDEKT +VIA+SENAPEMLTMVSHAVPSVGEHPV
Sbjct: 63   SDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPV 122

Query: 3270 LGIGSDIRNVFTAPSAAALHKALGFGEVSLLNPVLVHCKTSGKPFYAIIHRVTGSLIIDF 3091
            LGIG+DIR +FT PS AAL KALGFGEVSLLNPVLVHCK SGKPFYAI+HRVTGSLI+DF
Sbjct: 123  LGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLILDF 182

Query: 3090 EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVMIY 2911
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQSLPSGS+ERLCDTMVQEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGY 242

Query: 2910 KFHDDDHGEVLTEVTKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2731
            KFH+DDHGEV++E+TKPGLEPY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKVVQ
Sbjct: 243  KFHEDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 2730 DENLPIELTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEG--SDSTHPERRK 2557
            DE LP +LTLCGSTLRAPH CHLQYMENMNSIASLVM+VVVN+GDEEG  SDS+  ++RK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRK 362

Query: 2556 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 2377
            RLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELENQ LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDM 422

Query: 2376 LLRDAPLGIVSQSPNVMDLVKCDGAVLIYKNKKYRLGITPNDFQVRDIVSWLDEYHRDST 2197
            L+RDAPLGIVSQSPN+MDLVKCDGA L+YKNK +RLG+ P+DFQ++DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMNPSDFQLQDIVSWLCEYHTDST 482

Query: 2196 GLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLIWFRSHTAAEVRWGGAKHDPGEKD 2017
            GLSTDSLYDAGFPGALALGDAVCGMAAV+I+DKDWL WFRSHTAAEVRWGGAKH+PGEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKD 542

Query: 2016 DGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAFKEADYLESDTKAIHTK 1837
            DGRKMHPRSSFKAFLEVVKTRS+PWKD+EMDAIHSLQLILRNAFK+A+ + S+T +I+ K
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDAEVVNSNTNSIYKK 602

Query: 1836 LNDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLPVDEATGK 1657
            LNDL+IDG+QELE+VT+EMVRLIETA VPILAVDVDG VNGWNTKIA+LTGLPVDEA GK
Sbjct: 603  LNDLKIDGMQELESVTAEMVRLIETALVPILAVDVDGQVNGWNTKIAELTGLPVDEAIGK 662

Query: 1656 HFLTLVEESSADSVSKMLQLALEGKEERNVQFEIKTHGRRSESGPISLVVNACASRDIKD 1477
            H LTLVE+SS D+V+KML+LAL+GKEE+NV+FEIKTHG   +S PISL+VNACAS+D++D
Sbjct: 663  HLLTLVEDSSVDTVNKMLELALQGKEEKNVEFEIKTHGPSRDSSPISLIVNACASKDVRD 722

Query: 1476 NVVGVCFIAQDVTAQKNMMDKFTKIEGDYRAXXXXXXXXXXXIFGTDEFGWCSEWNAAMT 1297
            NVVGVCF+A D+T QK++MDKFT+IEGDYRA           IFGTD+FGWCSEWN AMT
Sbjct: 723  NVVGVCFMAHDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNTAMT 782

Query: 1296 KLSGWSRDDVINKMLLGEIFGMNRACCRLKNQEAFVNLGIVLNNAVTGQDNEKLPFGFFS 1117
            KL+GW RDDV++KMLLGE+FG   ACCRLKNQEAFVN G+VLNNA+TGQ++EK+PFGFF+
Sbjct: 783  KLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAITGQESEKIPFGFFA 842

Query: 1116 RTGKYVECLLCVSKKLDEEGVVTGVFCFXXXXXXXXXXXLHVQRLSEQTALKRLRVLSYI 937
            R GKYVECLLCVSK+LD+EG VTG+FCF           L+VQRLSEQTALKRL+VL+YI
Sbjct: 843  RYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALYVQRLSEQTALKRLKVLAYI 902

Query: 936  RREIRNPLSGIIFSRKMMEGTNLDDEQKNLLRTSVYCQRQLNKILDDTDLDHIIEGYLDL 757
            RR+IRNPLSGIIFSRKM+EGT+L +EQKN+L TS  CQRQLNKILDDTDLD II+GYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIDGYLDL 962

Query: 756  EMVEFKLHEVLIVSISQVMLKSNGKGIMIVDNLPPNLSTETLYGDSLRLQQVLAAFLLTA 577
            EM+EFKLHEVL+ SISQVM+KSNGK IMI +++  +L  ETLYGDS RLQQVLA FLL +
Sbjct: 963  EMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVS 1022

Query: 576  VTSTPSGGQLAIAASMTKDSIGESVQLGHLEFRITHTGGGVPQELLNQMFGDAVDASEDG 397
            V +TPSGGQL+I+  +TKD IGESVQL  LEFRI HTGGGVP+ELL QMFG   DASE+G
Sbjct: 1023 VNATPSGGQLSISGRLTKDRIGESVQLALLEFRIRHTGGGVPEELLGQMFGSEADASEEG 1082

Query: 396  ISLFISRKLVKLMNGEVQYLREAGRSTFIISVELAIS 286
            ISL +SRKLVKLMNGEVQYLREAG+STFIISVELA++
Sbjct: 1083 ISLLVSRKLVKLMNGEVQYLREAGQSTFIISVELAVA 1119


>sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|emb|CAA47284.1| type-A
            phytochrome [Nicotiana tabacum]
          Length = 1124

 Score = 1800 bits (4663), Expect = 0.0
 Identities = 891/1119 (79%), Positives = 998/1119 (89%), Gaps = 5/1119 (0%)
 Frame = -2

Query: 3621 SKQPGQSSINSARSRHSARVVAQTSIDAKLHAXXXXXXXXXXXXXSVRVTNV---DQRPK 3451
            S +P QSS  SARS+HSAR++AQT+IDAKLHA             SVRVT+V   +++PK
Sbjct: 3    SSRPSQSSTTSARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERKPK 62

Query: 3450 PDKVTTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGEHPV 3271
             D+VTT YL+QIQKGK IQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVGE P 
Sbjct: 63   SDRVTTAYLNQIQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPA 122

Query: 3270 LGIGSDIRNVFTAPSAAALHKALGFGEVSLLNPVLVHCKTSGKPFYAIIHRVTGSLIIDF 3091
            LGIG+DIR +FT PSAAAL KALGFGEVSLLNPVLVHCKTSGKP+YAI+HRVTGSLIIDF
Sbjct: 123  LGIGTDIRTIFTGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLIIDF 182

Query: 3090 EPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSIERLCDTMVQEVFELTGYDRVMIY 2911
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGS+ERLCDTMVQEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTY 242

Query: 2910 KFHDDDHGEVLTEVTKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2731
            KFHDDDHGEV+ E+TKPGL+PY+GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKVVQ
Sbjct: 243  KFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 2730 DENLPIELTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEG--SDSTHPERRK 2557
            DE LP +LTLCGSTLRAPH CHLQYMENM+SIASLVM+VVVN+GDEEG  SDST  ++RK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRK 362

Query: 2556 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 2377
            RLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELE+Q+LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDM 422

Query: 2376 LLRDAPLGIVSQSPNVMDLVKCDGAVLIYKNKKYRLGITPNDFQVRDIVSWLDEYHRDST 2197
            L+R APLGIVSQSPN+MDLVKCDGA L+YKNK +RLG+TP+DFQ+ DIVSWL EYH DST
Sbjct: 423  LMRVAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDST 482

Query: 2196 GLSTDSLYDAGFPGALALGDAVCGMAAVKITDKDWLIWFRSHTAAEVRWGGAKHDPGEKD 2017
            GLSTDSLYDAGFPGALALGD VCGMAAV+I+DK WL W+RSHTAAEVRWGGAKH+PGEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKD 542

Query: 2016 DGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAFKEADYLESDTKAIHTK 1837
            DGRKMHPRSSFKAFLEVVKTRS+PWKD+EMDAIHSLQLILRNA K+AD ++S+T  IHTK
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTK 602

Query: 1836 LNDLQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLPVDEATGK 1657
            LNDL+IDG+QELEAVT+EMVRLIETASVPI AVDVDG +NGWNTKIA+LTGLPVDEA G 
Sbjct: 603  LNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGN 662

Query: 1656 HFLTLVEESSADSVSKMLQLALEGKEERNVQFEIKTHGRRSESGPISLVVNACASRDIKD 1477
            H LTLVE+SS D+VSKML+LAL+GKEERNV+FEIKTHG   +S PISL+VNACASRD+ D
Sbjct: 663  HLLTLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDVGD 722

Query: 1476 NVVGVCFIAQDVTAQKNMMDKFTKIEGDYRAXXXXXXXXXXXIFGTDEFGWCSEWNAAMT 1297
            +VVGVCFIAQD+T QKN+MDKFT+IEGDYRA           IFGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 1296 KLSGWSRDDVINKMLLGEIFGMNRACCRLKNQEAFVNLGIVLNNAVTGQDNEKLPFGFFS 1117
            KL+GW RDDVI+KMLLGE+FG   ACCRLKNQEAFVN G+VLNNA+TGQ+  K+ FGFF+
Sbjct: 783  KLTGWRRDDVIDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGFFA 842

Query: 1116 RTGKYVECLLCVSKKLDEEGVVTGVFCFXXXXXXXXXXXLHVQRLSEQTALKRLRVLSYI 937
            R GKYVECLLCVSK+LD EG VTG+FCF           LH+QRLSEQTALKRL+VL+YI
Sbjct: 843  RNGKYVECLLCVSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYI 902

Query: 936  RREIRNPLSGIIFSRKMMEGTNLDDEQKNLLRTSVYCQRQLNKILDDTDLDHIIEGYLDL 757
            RR+IRNPLSGIIFSRKM+EGTNL +EQKN+LRTS  CQRQLNKILDDTDLD II+GYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYLDL 962

Query: 756  EMVEFKLHEVLIVSISQVMLKSNGKGIMIVDNLPPNLSTETLYGDSLRLQQVLAAFLLTA 577
            EM+EFKLHEVL+ SISQ+M+KSNGK IMIV+++  +L  ETLYGDS RLQQVLA FLL  
Sbjct: 963  EMLEFKLHEVLVASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQVLANFLLVC 1022

Query: 576  VTSTPSGGQLAIAASMTKDSIGESVQLGHLEFRITHTGGGVPQELLNQMFGDAVDASEDG 397
            V STPSGGQL+I+ ++TKD IGESVQL  LE RI+HTGGGVP+ELL+QMFG   +ASE+G
Sbjct: 1023 VNSTPSGGQLSISGTLTKDRIGESVQLALLEVRISHTGGGVPEELLSQMFGTEAEASEEG 1082

Query: 396  ISLFISRKLVKLMNGEVQYLREAGRSTFIISVELAISNK 280
            ISL ISRKLVKLMNGEVQYLREAGRSTFIISVELA++ K
Sbjct: 1083 ISLLISRKLVKLMNGEVQYLREAGRSTFIISVELAVATK 1121