BLASTX nr result

ID: Scutellaria22_contig00002245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00002245
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306429.1| high mobility group family [Populus trichoca...   114   3e-23
gb|ABK94286.1| unknown [Populus trichocarpa]                          112   9e-23
gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]       111   2e-22
emb|CAA05365.1| high mobility group protein [Solanum tuberosum]       107   5e-21
gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirs...   105   2e-20

>ref|XP_002306429.1| high mobility group family [Populus trichocarpa]
           gi|222855878|gb|EEE93425.1| high mobility group family
           [Populus trichocarpa]
          Length = 144

 Score =  114 bits (285), Expect = 3e-23
 Identities = 57/84 (67%), Positives = 61/84 (72%)
 Frame = +1

Query: 358 SAFFVFMEDFRKIYKEKHPNNKSVAAVGKAGGDKWKSLTDEEKAPYVXXXXXXXXXXXXX 537
           SAFFVFMEDFRK YKE HPNNKSVAAVGKAGGDKWKSL++ EKAPY              
Sbjct: 44  SAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLSEAEKAPYAAKAEKRKFEYNKD 103

Query: 538 XXXXNRKLAGEGDDESDKSKSEVN 609
               N++LAG  DDESDKSKSEVN
Sbjct: 104 MAAYNKRLAGGNDDESDKSKSEVN 127


>gb|ABK94286.1| unknown [Populus trichocarpa]
          Length = 144

 Score =  112 bits (281), Expect = 9e-23
 Identities = 56/84 (66%), Positives = 61/84 (72%)
 Frame = +1

Query: 358 SAFFVFMEDFRKIYKEKHPNNKSVAAVGKAGGDKWKSLTDEEKAPYVXXXXXXXXXXXXX 537
           SAFFVFMEDFRK YKE HPNNKSVAAVGKAGGDKWKSL++ EKAP+              
Sbjct: 44  SAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLSEAEKAPFAAKAEKRKFEYNKD 103

Query: 538 XXXXNRKLAGEGDDESDKSKSEVN 609
               N++LAG  DDESDKSKSEVN
Sbjct: 104 MAAYNKRLAGGNDDESDKSKSEVN 127


>gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
          Length = 146

 Score =  111 bits (278), Expect = 2e-22
 Identities = 57/86 (66%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
 Frame = +1

Query: 358 SAFFVFMEDFRKIYKEKHPNNKSVAAVGKAGGDKWKSLTDEEKAPYVXXXXXXXXXXXXX 537
           SAFFVFMEDFRK YKEKHPNNKSVAAVGKAGGDKWK LTD EKAP++             
Sbjct: 41  SAFFVFMEDFRKTYKEKHPNNKSVAAVGKAGGDKWKQLTDAEKAPFIAKAEKRKQEYEKS 100

Query: 538 XXXXNRKLAGEG--DDESDKSKSEVN 609
               NRK AGE   ++ESDKS+SEVN
Sbjct: 101 MQAYNRKQAGEAADEEESDKSRSEVN 126


>emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
          Length = 141

 Score =  107 bits (266), Expect = 5e-21
 Identities = 57/86 (66%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
 Frame = +1

Query: 358 SAFFVFMEDFRKIYKEKHPNNKSVAAVGKAGGDKWKSLTDEEKAPYVXXXXXXXXXXXXX 537
           SAFFVFME+FRK YKEKHPNNKSVA VGKAGGDKWK L+DEEKAPY              
Sbjct: 41  SAFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKN 100

Query: 538 XXXXNRKL-AGEGDD-ESDKSKSEVN 609
               N+KL AG+ DD ESDKSKSEV+
Sbjct: 101 MDAYNKKLAAGDADDEESDKSKSEVH 126


>gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirsutum]
          Length = 139

 Score =  105 bits (261), Expect = 2e-20
 Identities = 55/85 (64%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
 Frame = +1

Query: 358 SAFFVFMEDFRKIYKEKHPNNKSVAAVGKAGGDKWKSLTDEEKAPYVXXXXXXXXXXXXX 537
           SAFFVFME+FRK YKE +P+N+SV+AVGKAGG+KWKS+TD EKAPYV             
Sbjct: 43  SAFFVFMEEFRKQYKEANPDNRSVSAVGKAGGEKWKSMTDAEKAPYVQKAEKRKSEYNKK 102

Query: 538 XXXXNRKLAGEG-DDESDKSKSEVN 609
               N KLAG G DDESDKSKSEVN
Sbjct: 103 MQAYNLKLAGGGNDDESDKSKSEVN 127


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