BLASTX nr result

ID: Scutellaria22_contig00002168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00002168
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ38371.1| HMG-protein [Plantago major]                          157   3e-36
gb|AFK49192.1| unknown [Lotus japonicus]                              127   5e-27
ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-l...   126   8e-27
dbj|BAJ33790.1| unnamed protein product [Thellungiella halophila]     123   7e-26
gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]              122   2e-25

>emb|CAJ38371.1| HMG-protein [Plantago major]
          Length = 212

 Score =  157 bits (398), Expect = 3e-36
 Identities = 94/150 (62%), Positives = 100/150 (66%), Gaps = 4/150 (2%)
 Frame = -2

Query: 972 LLDMKTGSRSKVATRKETKQVLKPVDDRKVGKRKAA--PXXXXXXXXXXXXXXXXXXXXX 799
           LL+MKTG RSK A RKET   LKPVDDRKVGKRKAA  P                     
Sbjct: 44  LLEMKTGGRSKAAVRKET---LKPVDDRKVGKRKAAAAPKVKKPAAKKDKKAKKDPNKPK 100

Query: 798 XXXSAFFVFLEEFRKTFKKENPNIKAVSAVGKAGGEKWKSMTXXXXXXXXXXXXKRKVEY 619
              SAFFVFLEEFR+TFKKENPNIKAVSAVGKAGGEKWKS+T            KRK EY
Sbjct: 101 RPPSAFFVFLEEFRQTFKKENPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRKSEY 160

Query: 618 GKLMNAYNKKQQESS--ADEGSEKSASEIH 535
            KLMNAYNKKQ+ S+  ADEGSEKS SE+H
Sbjct: 161 EKLMNAYNKKQESSADEADEGSEKSRSEVH 190


>gb|AFK49192.1| unknown [Lotus japonicus]
          Length = 173

 Score =  127 bits (319), Expect = 5e-27
 Identities = 73/133 (54%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
 Frame = -2

Query: 927 KETKQVLKPVDDRKVGKRKAAPXXXXXXXXXXXXXXXXXXXXXXXXSAFFVFLEEFRKTF 748
           K +K+VLKPVDDRKVGKRKAA                         SAFFVFLE+FRKTF
Sbjct: 9   KTSKEVLKPVDDRKVGKRKAAVKPDKGTAGKAKKAKKDPNKPKRPPSAFFVFLEDFRKTF 68

Query: 747 KKENPNIKAVSAVGKAGGEKWKSMTXXXXXXXXXXXXKRKVEYGKLMNAYNKKQQESS-- 574
           K ENPN+K VSAVGKAGGEKWKS+T            KRK EY KL+NAYN KQ  ++  
Sbjct: 69  KAENPNVKGVSAVGKAGGEKWKSLTKAEKAPYEAKAAKRKAEYEKLINAYNNKQASTADD 128

Query: 573 ADEGSEKSASEIH 535
            DE S+KS SEI+
Sbjct: 129 VDEESDKSKSEIN 141


>ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera]
           gi|147815135|emb|CAN74566.1| hypothetical protein
           VITISV_023651 [Vitis vinifera]
           gi|297740214|emb|CBI30396.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  126 bits (317), Expect = 8e-27
 Identities = 71/137 (51%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
 Frame = -2

Query: 951 SRSKVATRKETKQVLKPVDDRKVGKRKAA---PXXXXXXXXXXXXXXXXXXXXXXXXSAF 781
           ++ K A R++TK+ LKP +DRK+GKRKAA                            SAF
Sbjct: 4   AKGKGAARRDTKEALKPAEDRKIGKRKAAVKAEKSSKRATTKDKKAKKDPNKPKRPPSAF 63

Query: 780 FVFLEEFRKTFKKENPNIKAVSAVGKAGGEKWKSMTXXXXXXXXXXXXKRKVEYGKLMNA 601
           FVFLEEFRK FKKENPN+KAVSAVGKAGGE+WKS++            K+K EY K+MNA
Sbjct: 64  FVFLEEFRKVFKKENPNVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEYEKIMNA 123

Query: 600 YNKKQQESSADEGSEKS 550
           YNKK QES+AD+G E+S
Sbjct: 124 YNKK-QESTADDGDEES 139


>dbj|BAJ33790.1| unnamed protein product [Thellungiella halophila]
          Length = 185

 Score =  123 bits (309), Expect = 7e-26
 Identities = 78/145 (53%), Positives = 89/145 (61%), Gaps = 2/145 (1%)
 Frame = -2

Query: 963 MKTGS-RSKVATRKETKQVLKPVDDRKVGKRKA-APXXXXXXXXXXXXXXXXXXXXXXXX 790
           MKT   + KV T KET   LKPVDDRKVGKRKA A                         
Sbjct: 1   MKTAKGKDKVKTTKET---LKPVDDRKVGKRKAPAAKATKRETRKEKRAKKDPNKPKRAP 57

Query: 789 SAFFVFLEEFRKTFKKENPNIKAVSAVGKAGGEKWKSMTXXXXXXXXXXXXKRKVEYGKL 610
           SAFFVFLE+FR+TFKKENPN+KAVSAVGKAGG+KWKSM+            KRK EY KL
Sbjct: 58  SAFFVFLEDFRQTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKL 117

Query: 609 MNAYNKKQQESSADEGSEKSASEIH 535
           M+AYNK  +E S  + SEKS SE++
Sbjct: 118 MDAYNKNMEEGS--DESEKSRSEVN 140


>gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]
          Length = 165

 Score =  122 bits (305), Expect = 2e-25
 Identities = 71/144 (49%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
 Frame = -2

Query: 951 SRSKVATRKETKQVLKPVDDRKVGKRKA---APXXXXXXXXXXXXXXXXXXXXXXXXSAF 781
           +R K A +K+  +V+KPV+DR  GKRKA   A                         SAF
Sbjct: 4   TRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAF 63

Query: 780 FVFLEEFRKTFKKENPNIKAVSAVGKAGGEKWKSMTXXXXXXXXXXXXKRKVEYGKLMNA 601
           FVFLEEFRK +K+E+PN+KAVSAVGKAGGEKWKS+T            KRK++Y KLM A
Sbjct: 64  FVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTA 123

Query: 600 YNKKQQ--ESSADEGSEKSASEIH 535
           YNKKQ+  E   +E SEKS SE+H
Sbjct: 124 YNKKQESTEDEDEEESEKSKSEVH 147


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