BLASTX nr result

ID: Scutellaria22_contig00002035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00002035
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34828.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    55   6e-06

>emb|CBI34828.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
 Frame = +2

Query: 239 CATTVPRTHFATSISKPF----SPSLRQTHFS----PSFVSLKSKNPPFKIVPLVAQTSD 394
           C T+VP T F T    P        +R  H S     S+VSLK+K  P  +VP VAQTSD
Sbjct: 5   CLTSVPTTLFTTKTPHPLLSLPPKPVRLFHLSCSCSSSWVSLKTKTSPTTLVPFVAQTSD 64

Query: 395 WAQQEEGETEE 427
           WAQQEE E ++
Sbjct: 65  WAQQEEEEEKD 75


>ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
           vinifera]
          Length = 312

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/68 (48%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
 Frame = +2

Query: 239 CATTVPRTHFATSISKPF----SPSLRQTHFS----PSFVSLKSKNPPFKIVPLVAQTSD 394
           C T+VP T F T    P        +R  H S     S+VSLK+K  P  +VP VAQTSD
Sbjct: 17  CLTSVPTTLFTTKTPHPLLSLPPKPVRLFHLSCSCSSSWVSLKTKTSPTTLVPFVAQTSD 76

Query: 395 WAQQEEGE 418
           WAQQEE E
Sbjct: 77  WAQQEEEE 84


Top