BLASTX nr result

ID: Scutellaria22_contig00001740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00001740
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23...   149   2e-34
ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23...   148   5e-34
ref|NP_001240201.1| uncharacterized protein LOC100809066 [Glycin...   146   2e-33
ref|XP_002329330.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_002516727.1| uv excision repair protein rad23, putative [...   134   8e-30

>ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23-3 [Vitis vinifera]
           gi|297737829|emb|CBI27030.3| unnamed protein product
           [Vitis vinifera]
          Length = 397

 Score =  149 bits (376), Expect = 2e-34
 Identities = 82/138 (59%), Positives = 91/138 (65%), Gaps = 19/138 (13%)
 Frame = -3

Query: 358 YSQAASNLVAGNNLEGAIRQILDMGGGTWDRDLVLRALRAAYNNPERAVDYLYSGI---- 191
           Y QAASNLVAGNN E AI+QILDMGGGTWDRD V+RALRAAYNNPERAV+YLYSGI    
Sbjct: 156 YGQAASNLVAGNNFEEAIQQILDMGGGTWDRDTVVRALRAAYNNPERAVEYLYSGIPEQA 215

Query: 190 ---------------XXXXXXXXXXXXXXXXXXXXPLDLFPQGLPSMGANAGGANTLEFL 56
                                              PLDLFPQG+P++G+N  GA TL+FL
Sbjct: 216 EVPPVARAPASGQAANPPAQSQQPVPAPSSGPNANPLDLFPQGIPNVGSNPAGAGTLDFL 275

Query: 55  RNTPQFQALRAMVQANPQ 2
           RN+ QFQALRAMVQANPQ
Sbjct: 276 RNSQQFQALRAMVQANPQ 293


>ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23-3 isoform 1 [Vitis
           vinifera] gi|296087286|emb|CBI33660.3| unnamed protein
           product [Vitis vinifera]
          Length = 381

 Score =  148 bits (373), Expect = 5e-34
 Identities = 85/140 (60%), Positives = 92/140 (65%), Gaps = 21/140 (15%)
 Frame = -3

Query: 358 YSQAASNLVAGNNLEGAIRQILDMGGGTWDRDLVLRALRAAYNNPERAVDYLYSGI---- 191
           Y QAASNLVAGNNLE  I+QILDMGGG+WDRD V+RALRAAYNNPERAV+YLYSGI    
Sbjct: 141 YGQAASNLVAGNNLEVTIQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQA 200

Query: 190 -----------------XXXXXXXXXXXXXXXXXXXXPLDLFPQGLPSMGANAGGANTLE 62
                                                PLDLFPQGLPSMG+NA  A TL+
Sbjct: 201 EGPPAARPPASGLAVNLPTQAPQGPQTTVASSGPNANPLDLFPQGLPSMGSNA-SAGTLD 259

Query: 61  FLRNTPQFQALRAMVQANPQ 2
           FLRN+PQFQALRAMVQANPQ
Sbjct: 260 FLRNSPQFQALRAMVQANPQ 279


>ref|NP_001240201.1| uncharacterized protein LOC100809066 [Glycine max]
           gi|255644546|gb|ACU22776.1| unknown [Glycine max]
          Length = 392

 Score =  146 bits (369), Expect = 2e-33
 Identities = 81/141 (57%), Positives = 92/141 (65%), Gaps = 22/141 (15%)
 Frame = -3

Query: 358 YSQAASNLVAGNNLEGAIRQILDMGGGTWDRDLVLRALRAAYNNPERAVDYLYSGI---- 191
           Y QAASNLVAG+NLEG I+QILDMGGG+WDRD V+RALRAAYNNPERAV+YLYSGI    
Sbjct: 148 YGQAASNLVAGSNLEGTIQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQA 207

Query: 190 ------------------XXXXXXXXXXXXXXXXXXXXPLDLFPQGLPSMGANAGGANTL 65
                                                 PLDLFPQGLP++G+ A GA +L
Sbjct: 208 EAPPVTREPASAQPANPPAAAPQAAQPASVPSSGPNANPLDLFPQGLPNVGSGAAGAGSL 267

Query: 64  EFLRNTPQFQALRAMVQANPQ 2
           +FLRN+ QFQALRAMVQANPQ
Sbjct: 268 DFLRNSQQFQALRAMVQANPQ 288


>ref|XP_002329330.1| predicted protein [Populus trichocarpa] gi|222870784|gb|EEF07915.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score =  139 bits (349), Expect = 3e-31
 Identities = 79/138 (57%), Positives = 90/138 (65%), Gaps = 19/138 (13%)
 Frame = -3

Query: 358 YSQAASNLVAGNNLEGAIRQILDMGGGTWDRDLVLRALRAAYNNPERAVDYLYSGI---- 191
           Y QAASNLVAG+NLE  I+QILDMGGG+W+R+ V+RALRAA+NNPERAV+YLYSGI    
Sbjct: 145 YGQAASNLVAGSNLEATIQQILDMGGGSWNRETVVRALRAAFNNPERAVEYLYSGIPEQA 204

Query: 190 ---------------XXXXXXXXXXXXXXXXXXXXPLDLFPQGLPSMGANAGGANTLEFL 56
                                              PLDLFPQGLPS G+NAG  N L+FL
Sbjct: 205 EVPPVAQGPASGVAVNPPAQAQQPAAPPSGGPNANPLDLFPQGLPSTGSNAGAGN-LDFL 263

Query: 55  RNTPQFQALRAMVQANPQ 2
           RN+ QFQALRAMVQANPQ
Sbjct: 264 RNSQQFQALRAMVQANPQ 281


>ref|XP_002516727.1| uv excision repair protein rad23, putative [Ricinus communis]
           gi|223544100|gb|EEF45625.1| uv excision repair protein
           rad23, putative [Ricinus communis]
          Length = 381

 Score =  134 bits (337), Expect = 8e-30
 Identities = 76/138 (55%), Positives = 88/138 (63%), Gaps = 19/138 (13%)
 Frame = -3

Query: 358 YSQAASNLVAGNNLEGAIRQILDMGGGTWDRDLVLRALRAAYNNPERAVDYLYSGI---- 191
           Y QAASNLVAG+NLE  ++QILDMGGG+WDR+ V RALRAA+NNPERAV+YLYSGI    
Sbjct: 142 YGQAASNLVAGSNLEATVQQILDMGGGSWDRETVARALRAAFNNPERAVEYLYSGIPEQP 201

Query: 190 ---------------XXXXXXXXXXXXXXXXXXXXPLDLFPQGLPSMGANAGGANTLEFL 56
                                              PLDLFPQGLP++G+    A TL+FL
Sbjct: 202 EVQPLPRAPSSGQAAIPSATAQEPAAPTSGGANANPLDLFPQGLPTIGSTT-SAGTLDFL 260

Query: 55  RNTPQFQALRAMVQANPQ 2
           RN+ QFQALRAMVQANPQ
Sbjct: 261 RNSQQFQALRAMVQANPQ 278


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