BLASTX nr result

ID: Scutellaria22_contig00001643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00001643
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_002511070.1| pentatricopeptide repeat-containing protein,...    82   4e-14
ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]         62   4e-08
emb|CBI36352.3| unnamed protein product [Vitis vinifera]               62   4e-08

>ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|222858859|gb|EEE96406.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/86 (46%), Positives = 59/86 (68%)
 Frame = +3

Query: 3   VMQVRPEDGGVYSVLAHLYANSEXXXXXXXXXXXXXXXXGIRKSAGCSLIELDGISHEFV 182
           +M+++P+DGGVYS+LA++YAN+E                 + K AG SLI+LDG++HEF+
Sbjct: 451 LMELKPDDGGVYSILANVYANAERWEDVMNIRRSLSSNRVVTKIAGFSLIQLDGVAHEFI 510

Query: 183 SGDCLHPWTKEIYFVLNGLELHQSQL 260
           +GD LH  + +IY VLNG+  HQS+L
Sbjct: 511 AGDSLHSESDKIYLVLNGIREHQSEL 536


>ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550185|gb|EEF51672.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 551

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 37/85 (43%), Positives = 58/85 (68%)
 Frame = +3

Query: 3   VMQVRPEDGGVYSVLAHLYANSEXXXXXXXXXXXXXXXXGIRKSAGCSLIELDGISHEFV 182
           VM+++PEDGGVYS+LA++YAN++                 ++K+AG S I+L G++HEF+
Sbjct: 464 VMELKPEDGGVYSILANVYANADRWEDVVKIRRSMSSNRAVKKNAGRSSIQLGGLTHEFL 523

Query: 183 SGDCLHPWTKEIYFVLNGLELHQSQ 257
           +G+ LH  + EIY VL+G+  HQS+
Sbjct: 524 AGESLHAQSSEIYMVLDGIREHQSE 548


>ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|222866487|gb|EEF03618.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/74 (44%), Positives = 44/74 (59%)
 Frame = +3

Query: 21  EDGGVYSVLAHLYANSEXXXXXXXXXXXXXXXXGIRKSAGCSLIELDGISHEFVSGDCLH 200
           +  GVY +L+ +YA++                 GI K  GCSLIE+DG++HEF +GD  H
Sbjct: 435 DSSGVYVLLSRVYASASRWNDVGLVRKLMTNN-GILKEPGCSLIEVDGVTHEFFAGDTSH 493

Query: 201 PWTKEIYFVLNGLE 242
           P TKEIY VLN +E
Sbjct: 494 PQTKEIYQVLNVVE 507


>gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
          Length = 649

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/79 (40%), Positives = 47/79 (59%)
 Frame = +3

Query: 3   VMQVRPEDGGVYSVLAHLYANSEXXXXXXXXXXXXXXXXGIRKSAGCSLIELDGISHEFV 182
           ++Q+ PE+  VY++L+++YA                   GI+K  GCSLIE++GI HEFV
Sbjct: 472 LLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEK-GIKKEPGCSLIEMNGIIHEFV 530

Query: 183 SGDCLHPWTKEIYFVLNGL 239
           +GD  HP +KEIY  L  +
Sbjct: 531 AGDQSHPMSKEIYCKLESI 549


>emb|CBI36352.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/81 (38%), Positives = 49/81 (60%)
 Frame = +3

Query: 3   VMQVRPEDGGVYSVLAHLYANSEXXXXXXXXXXXXXXXXGIRKSAGCSLIELDGISHEFV 182
           ++++ PE+G VY +L ++YA                   GI+K+ GCSLIE++G  HEFV
Sbjct: 428 ILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDR-GIKKTPGCSLIEMNGSVHEFV 486

Query: 183 SGDCLHPWTKEIYFVLNGLEL 245
           +GD +HP +KEIY  L+ + +
Sbjct: 487 AGDQVHPQSKEIYSKLDEMSV 507


Top