BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00001451
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   246   7e-63
ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   234   2e-59
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   234   3e-59
ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   229   1e-57
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]    229   1e-57

>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
            vinifera]
          Length = 288

 Score =  246 bits (628), Expect = 7e-63
 Identities = 139/255 (54%), Positives = 162/255 (63%), Gaps = 12/255 (4%)
 Frame = -3

Query: 1097 SRFIKNVAFSSEVEEDENIDFGGEKEPVFSPELNVFVGNLPXXXXXXXXXXXXXXXXXXX 918
            SRF++NVA SS+ E+DE++    E EP FSP+L +FVGN                     
Sbjct: 59   SRFVRNVAVSSDYEQDEDV-LSDEGEPSFSPDLKLFVGN--------------------- 96

Query: 917  XXXFVGNLPFTVDSAVLAGLFQQVGTVEKVEVIYDKFTGRSRGFGFVTMATVXXXXXXXX 738
                   LPF VDSA LAGLF+Q G VE VEVIYDK TGRSRGFGFVTM+TV        
Sbjct: 97   -------LPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQ 149

Query: 737  QFNGYELEGRVLRVNCGPPPAKXXXXXXXXXXXXXXRP------------MDNSNKLHVG 594
            QFNGYELEGR LRVN GPPPA+                            ++++N+++VG
Sbjct: 150  QFNGYELEGRQLRVNSGPPPARRENSNFRGENSNFRGENTNFRGPRGGANLNSTNRIYVG 209

Query: 593  NLSWGVDNLALETLFSEHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEELDGAD 414
            NLSWGVD+LALETLFSE G V EARV+YDRE GRSRGFGFVTY+S EEVN AIE LDG D
Sbjct: 210  NLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVD 269

Query: 413  LDGRPIRVSPAGDRP 369
            L+GR IRV+ A  RP
Sbjct: 270  LNGRSIRVTMAEARP 284


>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
            sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
            kDa ribonucleoprotein, chloroplastic-like [Cucumis
            sativus]
          Length = 278

 Score =  234 bits (598), Expect = 2e-59
 Identities = 130/244 (53%), Positives = 159/244 (65%), Gaps = 1/244 (0%)
 Frame = -3

Query: 1097 SRFIKNVAFSSEVEEDEN-IDFGGEKEPVFSPELNVFVGNLPXXXXXXXXXXXXXXXXXX 921
            SRF++NVA SS+  ++E  ++  G+ +  ++P+L +FVGN                    
Sbjct: 61   SRFVRNVAVSSDYGQEEGTLEVDGD-DSSYAPDLKLFVGN-------------------- 99

Query: 920  XXXXFVGNLPFTVDSAVLAGLFQQVGTVEKVEVIYDKFTGRSRGFGFVTMATVXXXXXXX 741
                    LPFTVDSA LAGLF+  G VE+VEVIYDK TGRSRGFGFVTM+TV       
Sbjct: 100  --------LPFTVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAA 151

Query: 740  XQFNGYELEGRVLRVNCGPPPAKXXXXXXXXXXXXXXRPMDNSNKLHVGNLSWGVDNLAL 561
             QFNGYEL+GR+LRVN GPPP K                 DN N++HV NL+WGVD+L L
Sbjct: 152  QQFNGYELDGRLLRVNYGPPPPKRDDSSFRGSRNASR--FDNRNRVHVSNLAWGVDDLTL 209

Query: 560  ETLFSEHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGRPIRVSPA 381
            E LF E GNV EA+VVYDR++G+SRGFGFVTY+S EEVN AI+ LDG DLDGRPIRV+ A
Sbjct: 210  ENLFREKGNVLEAKVVYDRDSGKSRGFGFVTYNSAEEVNEAIQSLDGVDLDGRPIRVTQA 269

Query: 380  GDRP 369
              RP
Sbjct: 270  EARP 273


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
            Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
            29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  234 bits (597), Expect = 3e-59
 Identities = 132/245 (53%), Positives = 157/245 (64%), Gaps = 2/245 (0%)
 Frame = -3

Query: 1097 SRFIKNVAFSS--EVEEDENIDFGGEKEPVFSPELNVFVGNLPXXXXXXXXXXXXXXXXX 924
            SRF++ V  S   ++E+ E+ D G E+E  FSP+L +FVGN                   
Sbjct: 53   SRFVRKVTLSDFDQIEDVEDGDDGVEEERNFSPDLKIFVGN------------------- 93

Query: 923  XXXXXFVGNLPFTVDSAVLAGLFQQVGTVEKVEVIYDKFTGRSRGFGFVTMATVXXXXXX 744
                     LPF+ DSA LA LF++ G VE VEVIYDK TGRSRGFGFVTM++       
Sbjct: 94   ---------LPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAA 144

Query: 743  XXQFNGYELEGRVLRVNCGPPPAKXXXXXXXXXXXXXXRPMDNSNKLHVGNLSWGVDNLA 564
              QFNGYEL+GR LRVN GPPP K                 D+SN+++VGNL+WGVD  A
Sbjct: 145  CQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGS-FDSSNRVYVGNLAWGVDQDA 203

Query: 563  LETLFSEHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGRPIRVSP 384
            LETLFSE G V +A+VVYDR++GRSRGFGFVTYSS EEVNNAIE LDG DL+GR IRVSP
Sbjct: 204  LETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSP 263

Query: 383  AGDRP 369
            A  RP
Sbjct: 264  AEARP 268


>ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
          Length = 275

 Score =  229 bits (583), Expect = 1e-57
 Identities = 127/247 (51%), Positives = 158/247 (63%), Gaps = 4/247 (1%)
 Frame = -3

Query: 1097 SRFIKNVAFSSEVEEDENIDFGGEKEPVFSPELNVFVGNLPXXXXXXXXXXXXXXXXXXX 918
            SRF+ +V  SS++ ++E+    G+  P FSP+L +FVGN                     
Sbjct: 55   SRFVPHVVVSSDLGQEEDTFSDGDG-PSFSPDLKLFVGN--------------------- 92

Query: 917  XXXFVGNLPFTVDSAVLAGLFQQVGTVEKVEVIYDKFTGRSRGFGFVTMATVXXXXXXXX 738
                   LPF VDSA LA LF+  G VE VEVIYDK TGRSRGFGFVTM++V        
Sbjct: 93   -------LPFNVDSAQLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAAAQ 145

Query: 737  QFNGYELEGRVLRVNCGPPPAKXXXXXXXXXXXXXXR----PMDNSNKLHVGNLSWGVDN 570
            QFNGYEL+GR LRVN GPPPA+                   P D+ N++HV NL+WGVDN
Sbjct: 146  QFNGYELDGRALRVNSGPPPARNESAPRFRGGSSFGSRGGGPSDSENRVHVSNLAWGVDN 205

Query: 569  LALETLFSEHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGRPIRV 390
            +AL++LF E GNV EARV+YDRE+GRSRGFGFVT+SSP+EVN+AI+ L+G DL+GR IRV
Sbjct: 206  VALKSLFREQGNVLEARVIYDRESGRSRGFGFVTFSSPDEVNSAIQSLNGVDLNGRAIRV 265

Query: 389  SPAGDRP 369
            S A  +P
Sbjct: 266  SLADSKP 272


>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
          Length = 289

 Score =  229 bits (583), Expect = 1e-57
 Identities = 133/258 (51%), Positives = 155/258 (60%), Gaps = 13/258 (5%)
 Frame = -3

Query: 1103 PISRFIKNVAFSSE--VEEDENIDFGGEKEPVFSPELNVFVGNLPXXXXXXXXXXXXXXX 930
            P SRF++NVA +SE  VEED   D    KE  FS +L +FVGN                 
Sbjct: 55   PASRFVRNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGN----------------- 97

Query: 929  XXXXXXXFVGNLPFTVDSAVLAGLFQQVGTVEKVEVIYDKFTGRSRGFGFVTMATVXXXX 750
                       LPF VDSA LA LF+  G VE VEVIYDK TGRSRGFGFVTM++V    
Sbjct: 98   -----------LPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVE 146

Query: 749  XXXXQFNGYELEGRVLRVNCGPPPAKXXXXXXXXXXXXXXRP-----------MDNSNKL 603
                QFNGYEL+GR LRVN GPPP K                             + N++
Sbjct: 147  AAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRV 206

Query: 602  HVGNLSWGVDNLALETLFSEHGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEELD 423
            +VGNLSWGVD++ALE+LFSE G V EARV+YDR++GRS+GFGFVTY S +EV NAI+ LD
Sbjct: 207  YVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLD 266

Query: 422  GADLDGRPIRVSPAGDRP 369
            GADLDGR IRVS A  RP
Sbjct: 267  GADLDGRQIRVSEAEARP 284