BLASTX nr result

ID: Scutellaria22_contig00001151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00001151
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chlorop...   298   9e-79
ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chlorop...   297   2e-78
ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chlorop...   295   6e-78
ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus ...   295   8e-78
ref|NP_180936.1| 30S ribosomal protein S5 [Arabidopsis thaliana]...   289   4e-76

>ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine
           max]
          Length = 300

 Score =  298 bits (763), Expect = 9e-79
 Identities = 160/250 (64%), Positives = 177/250 (70%), Gaps = 1/250 (0%)
 Frame = -3

Query: 770 SGDAETIFFES-DPDEVTTFSPPEAPEGFIVPPSFDDDPXXXXXXXXXXXXXIYGPAYSG 594
           S D +T FF++ +P +  TF+PPE PEGF+ PPSFDD P             +YGP YSG
Sbjct: 51  SDDIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFDDGPLETEDEIAAAYEELYGPGYSG 110

Query: 593 ESYLGNDVNVMDSKVKKVTGLGSRNKKEKVRDGFDERVIQXXXXXXXXXXXKQLHFRXXX 414
            S LGNDV VMD+KVKK TG GS  KKEKVRDGF+ERV+Q           KQL FR   
Sbjct: 111 VSVLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERVVQVRRVTKVVKGGKQLRFRAVV 170

Query: 413 XXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVAVPMTKYKTFPHRAEANYGAAKVML 234
                                 VQKSAVNARRNI+ VPMTKY TFPHRA+ +YGAAKVML
Sbjct: 171 VVGDKKGSVGVGVGKAKEVIAAVQKSAVNARRNIIKVPMTKYSTFPHRADGDYGAAKVML 230

Query: 233 RPASPGTGVIAGGAVRIVLELAGVENALGKQLGSNNALNNARATVVAVQMMRQFSEVAEE 54
           RPASPGTGVIAGG+VRIVLE+AGVENALGKQLGSNNALNNARATVVAVQ M+QF EVAEE
Sbjct: 231 RPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAEE 290

Query: 53  RGIPMEELWK 24
           RGIPMEELWK
Sbjct: 291 RGIPMEELWK 300


>ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Cucumis
           sativus] gi|449479289|ref|XP_004155560.1| PREDICTED: 30S
           ribosomal protein S5, chloroplastic-like [Cucumis
           sativus]
          Length = 307

 Score =  297 bits (760), Expect = 2e-78
 Identities = 159/253 (62%), Positives = 177/253 (69%), Gaps = 1/253 (0%)
 Frame = -3

Query: 779 KISSGDAETIFFES-DPDEVTTFSPPEAPEGFIVPPSFDDDPXXXXXXXXXXXXXIYGPA 603
           +  S D +T FF++ +P E   + PPE PEGF+ PPSFD+ P             IYGPA
Sbjct: 55  RAKSSDIDTTFFDNVNPQEDIVYDPPEVPEGFVPPPSFDEGPIETEEEIAAGYEEIYGPA 114

Query: 602 YSGESYLGNDVNVMDSKVKKVTGLGSRNKKEKVRDGFDERVIQXXXXXXXXXXXKQLHFR 423
           YSG S LGND+ VMDSKVKK  G GS+ KK+K RDGFDERV+Q           KQLHFR
Sbjct: 115 YSGVSVLGNDIYVMDSKVKKAGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFR 174

Query: 422 XXXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVAVPMTKYKTFPHRAEANYGAAK 243
                                    VQKSAVNARRNIV VPMTKY TFPHR+E +YGAAK
Sbjct: 175 AIVVVGDKQGQVGVGVGKAKEVITAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAK 234

Query: 242 VMLRPASPGTGVIAGGAVRIVLELAGVENALGKQLGSNNALNNARATVVAVQMMRQFSEV 63
           VMLRPASPGTGVIAGGAVRIVLE+AGVENALGKQLGSNNALNNARATVVAVQ M+QF +V
Sbjct: 235 VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDV 294

Query: 62  AEERGIPMEELWK 24
           A+ERGIPMEELWK
Sbjct: 295 AQERGIPMEELWK 307


>ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine
           max]
          Length = 316

 Score =  295 bits (756), Expect = 6e-78
 Identities = 158/250 (63%), Positives = 176/250 (70%), Gaps = 1/250 (0%)
 Frame = -3

Query: 770 SGDAETIFFES-DPDEVTTFSPPEAPEGFIVPPSFDDDPXXXXXXXXXXXXXIYGPAYSG 594
           S D +T FF++ +P +  TF+PPE PEGF+ PPSFDD P             +YGP YSG
Sbjct: 67  SDDIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFDDGPLETEDEIAAAYEELYGPGYSG 126

Query: 593 ESYLGNDVNVMDSKVKKVTGLGSRNKKEKVRDGFDERVIQXXXXXXXXXXXKQLHFRXXX 414
            S LGNDV VMD+KVKK TG GS  KKEKVRDGF+ERV+Q           KQL FR   
Sbjct: 127 VSVLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERVVQVRRVTKVVKGGKQLRFRAVV 186

Query: 413 XXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVAVPMTKYKTFPHRAEANYGAAKVML 234
                                 VQKSAVNARRNI+ VPMTKY TFPHRA+ +YGAAKVML
Sbjct: 187 VVGDKKGQVGVGVGKAKEVIAAVQKSAVNARRNIIKVPMTKYSTFPHRADGDYGAAKVML 246

Query: 233 RPASPGTGVIAGGAVRIVLELAGVENALGKQLGSNNALNNARATVVAVQMMRQFSEVAEE 54
           RPASPGTGVIAGG+VRIVLE+AGV+NALGKQLGSNNALNNARATV AVQ M+QF EVAEE
Sbjct: 247 RPASPGTGVIAGGSVRIVLEMAGVDNALGKQLGSNNALNNARATVAAVQKMKQFREVAEE 306

Query: 53  RGIPMEELWK 24
           RGIPMEELWK
Sbjct: 307 RGIPMEELWK 316


>ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus communis]
           gi|223549356|gb|EEF50844.1| 30S ribosomal protein S5,
           putative [Ricinus communis]
          Length = 309

 Score =  295 bits (755), Expect = 8e-78
 Identities = 155/251 (61%), Positives = 177/251 (70%), Gaps = 1/251 (0%)
 Frame = -3

Query: 773 SSGDAETIFFES-DPDEVTTFSPPEAPEGFIVPPSFDDDPXXXXXXXXXXXXXIYGPAYS 597
           SS D +T FF++ +P++   F PP  PE F+ PPSFD++P             +YG  YS
Sbjct: 59  SSSDIDTTFFDNLNPEDDIVFDPPTPPEDFVPPPSFDEEPMETEEEIAAAYEDLYGAGYS 118

Query: 596 GESYLGNDVNVMDSKVKKVTGLGSRNKKEKVRDGFDERVIQXXXXXXXXXXXKQLHFRXX 417
           G SYLGNDV VMDSKVKK TG GS+ K+EK+RDGF+ERV+Q           KQLHFR  
Sbjct: 119 GVSYLGNDVYVMDSKVKKTTGFGSKGKREKIRDGFEERVVQVRRVTKVVKGGKQLHFRAI 178

Query: 416 XXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVAVPMTKYKTFPHRAEANYGAAKVM 237
                                  VQKSAVNARRNI+ VPMTKY TFPHR++ +YGAAKVM
Sbjct: 179 VVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNIITVPMTKYLTFPHRSDGDYGAAKVM 238

Query: 236 LRPASPGTGVIAGGAVRIVLELAGVENALGKQLGSNNALNNARATVVAVQMMRQFSEVAE 57
           LRPASPGTGVIAGGAVRIVLE+AGVENALGKQ+GS NALNNARATVVAVQ MRQFS+VA 
Sbjct: 239 LRPASPGTGVIAGGAVRIVLEMAGVENALGKQIGSKNALNNARATVVAVQKMRQFSDVAR 298

Query: 56  ERGIPMEELWK 24
           ERGIPMEELWK
Sbjct: 299 ERGIPMEELWK 309


>ref|NP_180936.1| 30S ribosomal protein S5 [Arabidopsis thaliana]
           gi|75101015|sp|P93014.1|RR5_ARATH RecName: Full=30S
           ribosomal protein S5, chloroplastic; Flags: Precursor
           gi|1707008|gb|AAC69132.1| 30S ribosomal protein S5
           [Arabidopsis thaliana] gi|15450886|gb|AAK96714.1| 30S
           ribosomal protein S5 [Arabidopsis thaliana]
           gi|20259882|gb|AAM13288.1| 30S ribosomal protein S5
           [Arabidopsis thaliana] gi|21593322|gb|AAM65271.1| 30S
           ribosomal protein S5 [Arabidopsis thaliana]
           gi|330253794|gb|AEC08888.1| 30S ribosomal protein S5
           [Arabidopsis thaliana]
          Length = 303

 Score =  289 bits (740), Expect = 4e-76
 Identities = 155/255 (60%), Positives = 176/255 (69%), Gaps = 3/255 (1%)
 Frame = -3

Query: 779 KISSGDAETIFFESDPDEVTT---FSPPEAPEGFIVPPSFDDDPXXXXXXXXXXXXXIYG 609
           K SS D ETIFFE +  E+T    F PP APEGF+ PP FD+               +YG
Sbjct: 49  KASSTDTETIFFEDETPEITANVVFDPPIAPEGFVSPPYFDEGSDETEEEIATAFEELYG 108

Query: 608 PAYSGESYLGNDVNVMDSKVKKVTGLGSRNKKEKVRDGFDERVIQXXXXXXXXXXXKQLH 429
           PAYSGES LG D+ VMDSK KK +G+G + KK+K+RDGF+ERV+Q           KQL 
Sbjct: 109 PAYSGESMLGKDIYVMDSKHKKSSGIGGKPKKDKIRDGFEERVVQVRRVTKVVKGGKQLK 168

Query: 428 FRXXXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNIVAVPMTKYKTFPHRAEANYGA 249
           FR                         VQKSA++ARRNIV VPMTKY TFPHR+E +YGA
Sbjct: 169 FRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIVQVPMTKYSTFPHRSEGDYGA 228

Query: 248 AKVMLRPASPGTGVIAGGAVRIVLELAGVENALGKQLGSNNALNNARATVVAVQMMRQFS 69
           AKVMLRPASPGTGVIAGGAVRIVLE+AGVENALGKQLGSNNALNNARAT+ AVQ MRQF 
Sbjct: 229 AKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATLAAVQQMRQFR 288

Query: 68  EVAEERGIPMEELWK 24
           +VA+ERGIPMEELWK
Sbjct: 289 DVAQERGIPMEELWK 303


Top