BLASTX nr result

ID: Scutellaria22_contig00000677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00000677
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr...   450   e-124
ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C...   444   e-122
ref|XP_002298178.1| light-harvesting complex II protein Lhcb6 [P...   443   e-122
ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein C...   442   e-121
gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia...   442   e-121

>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
          Length = 258

 Score =  450 bits (1157), Expect = e-124
 Identities = 214/257 (83%), Positives = 234/257 (91%), Gaps = 3/257 (1%)
 Frame = +1

Query: 286  ASTSAALVNGLGSTFLSGGKKSQALISAA---RVGTAAAPKRLFVVVAAVAPKKSWLPGV 456
            A+TS A++NGLGS+FLSGG +SQ L++ +   +VG A +P+RL +VVAA APKKSW+PGV
Sbjct: 3    AATSGAVLNGLGSSFLSGGSRSQTLLATSIGGKVGVAVSPRRL-IVVAAAAPKKSWIPGV 61

Query: 457  RGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 636
            RGGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA
Sbjct: 62   RGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 121

Query: 637  WSGIPWFEAGAAPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFNPESQSVEWATPWSKT 816
            WSG+PWFEAGA P A+APFSF          MGWVESKRWVDFFNP+SQSVEWATPWSKT
Sbjct: 122  WSGVPWFEAGADPNAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSKT 181

Query: 817  AENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDSEKLERLKLAEIKHARLAMVAMLI 996
            AENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPD+EKLERLKLAEIKHAR+AM+AMLI
Sbjct: 182  AENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLI 241

Query: 997  FYFEAGQGKTPLGALGL 1047
            FYFEAGQGKTPLGALGL
Sbjct: 242  FYFEAGQGKTPLGALGL 258


>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
            [Vitis vinifera] gi|147804704|emb|CAN71620.1|
            hypothetical protein VITISV_015544 [Vitis vinifera]
          Length = 257

 Score =  444 bits (1142), Expect = e-122
 Identities = 217/258 (84%), Positives = 232/258 (89%), Gaps = 4/258 (1%)
 Frame = +1

Query: 286  ASTSAALVNGLGSTFLSGGKKSQALISA---ARVGTAA-APKRLFVVVAAVAPKKSWLPG 453
            A+TSAA++NGLGS FL+GGK+SQ+L+SA   A+ G A  AP+RL VV AA  PKKSWLPG
Sbjct: 2    AATSAAVLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAA--PKKSWLPG 59

Query: 454  VRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQ 633
            V+ GGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQ
Sbjct: 60   VKAGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ 119

Query: 634  AWSGIPWFEAGAAPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFNPESQSVEWATPWSK 813
            AWSGIPWFEAGAAPGAVAPFSF          MGWVESKRWVDFFNPESQSVEWATPWS+
Sbjct: 120  AWSGIPWFEAGAAPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSR 179

Query: 814  TAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDSEKLERLKLAEIKHARLAMVAML 993
            TAENFANATGEQGYPGGKFFDPL  AGT+KDGVYIPD EKLERLKLAEIKHAR+AM+AML
Sbjct: 180  TAENFANATGEQGYPGGKFFDPLSLAGTIKDGVYIPDVEKLERLKLAEIKHARIAMLAML 239

Query: 994  IFYFEAGQGKTPLGALGL 1047
            IFYFEAGQGKTPLGALGL
Sbjct: 240  IFYFEAGQGKTPLGALGL 257


>ref|XP_002298178.1| light-harvesting complex II protein Lhcb6 [Populus trichocarpa]
            gi|118486723|gb|ABK95197.1| unknown [Populus trichocarpa]
            gi|222845436|gb|EEE82983.1| light-harvesting complex II
            protein Lhcb6 [Populus trichocarpa]
          Length = 257

 Score =  443 bits (1139), Expect = e-122
 Identities = 213/256 (83%), Positives = 228/256 (89%), Gaps = 2/256 (0%)
 Frame = +1

Query: 286  ASTSAALVNGLGSTFLSGGKKSQAL--ISAARVGTAAAPKRLFVVVAAVAPKKSWLPGVR 459
            A+T+ A++NGLGS+FL GGK++QAL  I A+R G+     R  VVVAA  PKKSW+P V+
Sbjct: 2    AATAGAVLNGLGSSFLCGGKRNQALLGIGASRTGSFPVGTRKLVVVAAAQPKKSWIPAVK 61

Query: 460  GGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 639
            GGG+LVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW
Sbjct: 62   GGGSLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 121

Query: 640  SGIPWFEAGAAPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFNPESQSVEWATPWSKTA 819
            SGIPWFEAGA PGA+APFSF          MGWVESKRWVDFFNPESQSVEWATPWSKTA
Sbjct: 122  SGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSKTA 181

Query: 820  ENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDSEKLERLKLAEIKHARLAMVAMLIF 999
            ENFANATG+QGYPGGKFFDPLGFAGTLKDGVYIPD EKLERLK+AEIKHARLAMVAMLIF
Sbjct: 182  ENFANATGDQGYPGGKFFDPLGFAGTLKDGVYIPDVEKLERLKVAEIKHARLAMVAMLIF 241

Query: 1000 YFEAGQGKTPLGALGL 1047
            YFEAGQGKTPLGALGL
Sbjct: 242  YFEAGQGKTPLGALGL 257


>ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
            [Glycine max]
          Length = 261

 Score =  442 bits (1136), Expect = e-121
 Identities = 213/260 (81%), Positives = 233/260 (89%), Gaps = 6/260 (2%)
 Frame = +1

Query: 286  ASTSAALVNGLGSTFLSGGKKSQALISAA---RVGTAA---APKRLFVVVAAVAPKKSWL 447
            A+TS A++NGLGS+FLSGG +SQ L++ A   +VG AA   +P+RL +VVAA APKKSWL
Sbjct: 3    AATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRL-IVVAAAAPKKSWL 61

Query: 448  PGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV 627
            PGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV
Sbjct: 62   PGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV 121

Query: 628  GQAWSGIPWFEAGAAPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFNPESQSVEWATPW 807
            GQAWSG+PWFEAGA P A+APFSF          MGWVESKRWVDFFNP+SQSVEWATPW
Sbjct: 122  GQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPW 181

Query: 808  SKTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDSEKLERLKLAEIKHARLAMVA 987
            S+T+ENFANATGEQGYPGGKFFDPL  AGT+KDGVYIPD+EKLERLKLAEIKHAR+AM+A
Sbjct: 182  SRTSENFANATGEQGYPGGKFFDPLSLAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLA 241

Query: 988  MLIFYFEAGQGKTPLGALGL 1047
            MLIFYFEAGQGKTPLGALGL
Sbjct: 242  MLIFYFEAGQGKTPLGALGL 261


>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
          Length = 257

 Score =  442 bits (1136), Expect = e-121
 Identities = 213/257 (82%), Positives = 229/257 (89%), Gaps = 3/257 (1%)
 Frame = +1

Query: 286  ASTSAALVNGLGSTFLSGGKKSQALISA---ARVGTAAAPKRLFVVVAAVAPKKSWLPGV 456
            A+TSAA++NGL S+FL+GGK SQAL+ A   AR+G  A PKR  +V AA APKKSW+P V
Sbjct: 2    ATTSAAVLNGLSSSFLTGGKNSQALLGAPVAARIGGLATPKRC-IVAAAAAPKKSWIPAV 60

Query: 457  RGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 636
            +GGGNL+DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA
Sbjct: 61   KGGGNLLDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 120

Query: 637  WSGIPWFEAGAAPGAVAPFSFXXXXXXXXXXMGWVESKRWVDFFNPESQSVEWATPWSKT 816
            WSGIPWFEAGA PGA+APFSF          MGWVESKRWVDFFNPESQSVEWATPWSKT
Sbjct: 121  WSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSKT 180

Query: 817  AENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDSEKLERLKLAEIKHARLAMVAMLI 996
            AENFAN TGEQGYPGGKFFDPL  AGTL+DGVYIPD+EKLERLK+AEIKHARLAM+AMLI
Sbjct: 181  AENFANFTGEQGYPGGKFFDPLSLAGTLQDGVYIPDTEKLERLKVAEIKHARLAMLAMLI 240

Query: 997  FYFEAGQGKTPLGALGL 1047
            FYFEAGQGKTPLGALGL
Sbjct: 241  FYFEAGQGKTPLGALGL 257


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