BLASTX nr result

ID: Salvia21_contig00042691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00042691
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628741.1| Pentatricopeptide repeat-containing protein ...    67   2e-09
ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]    55   6e-06

>ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522763|gb|AET03217.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 758

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/77 (38%), Positives = 54/77 (70%)
 Frame = +3

Query: 36  IARIFEQKLILLIKSCKTWKQLQQIQSQITINATEHRNHIVSSHFLSKCTELRQTGYARQ 215
           + RI E+K I L++SCK +++L QIQ+QI  +  EH N  V+ +F++ C+  ++  +AR+
Sbjct: 7   VQRIVEEKFITLLRSCKNYERLHQIQAQIVTHGLEH-NDFVAPNFITTCSRFKRIHHARK 65

Query: 216 VFDRLPDRRHTSLWNVM 266
           +FD++P + +T+ WN M
Sbjct: 66  LFDKIP-QPNTATWNAM 81


>ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 623

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/75 (41%), Positives = 51/75 (68%)
 Frame = +3

Query: 42  RIFEQKLILLIKSCKTWKQLQQIQSQITINATEHRNHIVSSHFLSKCTELRQTGYARQVF 221
           R+ E++ I L++SCKT KQ+ QIQ+QI  N  ++ N  ++   ++ C  L++  YARQ+F
Sbjct: 35  RLLEERFISLLQSCKTSKQVHQIQAQIIANGFQY-NEYITPKLVTICATLKRMTYARQLF 93

Query: 222 DRLPDRRHTSLWNVM 266
           D++PD  + +LWN M
Sbjct: 94  DQIPD-PNIALWNSM 107


>emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
          Length = 686

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/65 (41%), Positives = 44/65 (67%)
 Frame = +3

Query: 72  IKSCKTWKQLQQIQSQITINATEHRNHIVSSHFLSKCTELRQTGYARQVFDRLPDRRHTS 251
           ++SCKT KQ+ QIQ+QI  N  ++ N  ++   ++ C  L++  YARQ+FD++PD  + +
Sbjct: 108 MRSCKTSKQVHQIQAQIIANGFQY-NEYITPKLVTICATLKRMTYARQLFDQIPD-PNIA 165

Query: 252 LWNVM 266
           LWN M
Sbjct: 166 LWNSM 170


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