BLASTX nr result

ID: Salvia21_contig00042303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00042303
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01934.1| hypothetical protein [Beta vulgaris]                   162   3e-38
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]    160   8e-38
gb|AAL06413.1|AF378049_1 reverse transcriptase [Pisum sativum]        160   8e-38
gb|ABG37658.1| integrase [Populus trichocarpa]                        160   8e-38
gb|AAL06415.1|AF378051_1 reverse transcriptase [Pisum sativum]        158   5e-37

>gb|ACY01934.1| hypothetical protein [Beta vulgaris]
          Length = 1717

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/99 (75%), Positives = 88/99 (88%)
 Frame = +3

Query: 3    VVRKEVLKLLDAGIIFAISNSEWVSPTQVVAKKGGITVIKDEHNELIATRLVNGWRMCID 182
            VV+KEV+KLLDAGII+ IS+S+WVSP QVV KKGG TV+K+E NELIATR+V GWRMCID
Sbjct: 889  VVKKEVMKLLDAGIIYPISDSKWVSPVQVVPKKGGTTVVKNEKNELIATRVVTGWRMCID 948

Query: 183  YRMLNTATRKDHFPLPFIDQMLDRLAGYEFYCFLDGYSG 299
            YR LN AT+KDHFPLPFIDQML+RLA +  +C+LDGYSG
Sbjct: 949  YRKLNVATKKDHFPLPFIDQMLERLACHSHFCYLDGYSG 987


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/98 (76%), Positives = 85/98 (86%)
 Frame = +3

Query: 6    VRKEVLKLLDAGIIFAISNSEWVSPTQVVAKKGGITVIKDEHNELIATRLVNGWRMCIDY 185
            VRK++LK LD GII+ IS+S WVSP QVV KK GITVI++E NELI TR+  GWR+CIDY
Sbjct: 849  VRKDILKCLDHGIIYPISDSSWVSPVQVVPKKSGITVIQNEANELIPTRIQTGWRVCIDY 908

Query: 186  RMLNTATRKDHFPLPFIDQMLDRLAGYEFYCFLDGYSG 299
            R LN ATRKDHFPLPFIDQML+RLAG+EFYCFLDGYSG
Sbjct: 909  RKLNLATRKDHFPLPFIDQMLERLAGHEFYCFLDGYSG 946


>gb|AAL06413.1|AF378049_1 reverse transcriptase [Pisum sativum]
          Length = 254

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/98 (76%), Positives = 86/98 (87%)
 Frame = +3

Query: 6   VRKEVLKLLDAGIIFAISNSEWVSPTQVVAKKGGITVIKDEHNELIATRLVNGWRMCIDY 185
           VRKEVLKLLD+G+I+ IS+S WVSP  VV KKGG +VI +E NELI TR V GWR+CID+
Sbjct: 1   VRKEVLKLLDSGMIYPISDSSWVSPVHVVPKKGGTSVILNEKNELIPTRTVTGWRVCIDH 60

Query: 186 RMLNTATRKDHFPLPFIDQMLDRLAGYEFYCFLDGYSG 299
           R LNTATRKDHFPLPFIDQML+RLAG+E+YCFLDGYSG
Sbjct: 61  RRLNTATRKDHFPLPFIDQMLERLAGHEYYCFLDGYSG 98


>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score =  160 bits (406), Expect = 8e-38
 Identities = 73/99 (73%), Positives = 87/99 (87%)
 Frame = +3

Query: 3   VVRKEVLKLLDAGIIFAISNSEWVSPTQVVAKKGGITVIKDEHNELIATRLVNGWRMCID 182
           VV+ EV+KLLD GII+ IS+S+WVSPTQVV KK G+TVI +E NELI TR + GWRMCID
Sbjct: 341 VVKNEVIKLLDNGIIYPISDSKWVSPTQVVPKKSGVTVITNEKNELIPTRTITGWRMCID 400

Query: 183 YRMLNTATRKDHFPLPFIDQMLDRLAGYEFYCFLDGYSG 299
           YR LN+ TRKDHFPLPF+DQ+L+R+AG+EFYCFLDGYSG
Sbjct: 401 YRKLNSMTRKDHFPLPFMDQILERVAGHEFYCFLDGYSG 439


>gb|AAL06415.1|AF378051_1 reverse transcriptase [Pisum sativum]
          Length = 254

 Score =  158 bits (399), Expect = 5e-37
 Identities = 72/98 (73%), Positives = 86/98 (87%)
 Frame = +3

Query: 6   VRKEVLKLLDAGIIFAISNSEWVSPTQVVAKKGGITVIKDEHNELIATRLVNGWRMCIDY 185
           VRKEV KLLDAG+I+ IS+S WVSP  VV KKGGITVI+++ +ELI T++  GWRMCIDY
Sbjct: 1   VRKEVFKLLDAGMIYPISDSPWVSPVHVVPKKGGITVIRNDKDELIPTKVETGWRMCIDY 60

Query: 186 RMLNTATRKDHFPLPFIDQMLDRLAGYEFYCFLDGYSG 299
           R LNTATRKDHFPLPF+DQML+RL+G ++YCFLDGYSG
Sbjct: 61  RRLNTATRKDHFPLPFMDQMLERLSGQQYYCFLDGYSG 98


Top