BLASTX nr result

ID: Salvia21_contig00042250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00042250
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   129   2e-28
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   124   8e-27
gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ...   122   4e-26
emb|CAN70510.1| hypothetical protein VITISV_023158 [Vitis vinifera]   120   2e-25
gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]              119   2e-25

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  129 bits (324), Expect = 2e-28
 Identities = 57/97 (58%), Positives = 72/97 (74%)
 Frame = -1

Query: 293  TDGQTEVLNRCLETYLRCFSSEQPKFWSKWLSWAEFCYNTGFHTAAGTTPFEVVYGKPPP 114
            TDGQTEV+NRCLETYLRCF ++QPK W+ W+ WAE+ +NT +H A G TPFE+VYG+PPP
Sbjct: 1031 TDGQTEVVNRCLETYLRCFIADQPKNWASWIPWAEYWFNTSYHAATGHTPFEMVYGRPPP 1090

Query: 113  RIVSFLPGEIRVQALAESLRSRDQILSHLRFHLERAQ 3
             I  ++ GE RV+A+   L  RD+ L  LR  L RAQ
Sbjct: 1091 VITRWVQGETRVEAVQRELLDRDEALKQLREQLLRAQ 1127


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  124 bits (311), Expect = 8e-27
 Identities = 54/97 (55%), Positives = 75/97 (77%)
 Frame = -1

Query: 293  TDGQTEVLNRCLETYLRCFSSEQPKFWSKWLSWAEFCYNTGFHTAAGTTPFEVVYGKPPP 114
            +DGQTEV+NRCLETYLRC   ++P+ WSKWL+ AE+ YNT +H+++  TPFE+VYG+ PP
Sbjct: 1250 SDGQTEVVNRCLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQVPP 1309

Query: 113  RIVSFLPGEIRVQALAESLRSRDQILSHLRFHLERAQ 3
              + +LPGE +V  +A SL+ R+ +L  L+FHL RAQ
Sbjct: 1310 VHLPYLPGESKVAVVARSLQEREDMLLFLKFHLMRAQ 1346


>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/97 (59%), Positives = 68/97 (70%)
 Frame = -1

Query: 293  TDGQTEVLNRCLETYLRCFSSEQPKFWSKWLSWAEFCYNTGFHTAAGTTPFEVVYGKPPP 114
            TDGQTEVLNRC+ETYLRCF+S  P+ W K+LSWAE  YNT FHTA   TPF+VVYG+ PP
Sbjct: 2440 TDGQTEVLNRCMETYLRCFASSHPRTWHKFLSWAELWYNTSFHTALKATPFQVVYGREPP 2499

Query: 113  RIVSFLPGEIRVQALAESLRSRDQILSHLRFHLERAQ 3
             IV F  G      L  +LR RD +L  ++ HL RAQ
Sbjct: 2500 AIVRFEEGSTNNYDLEMALRERDAMLVQIQQHLLRAQ 2536


>emb|CAN70510.1| hypothetical protein VITISV_023158 [Vitis vinifera]
          Length = 790

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/97 (56%), Positives = 70/97 (72%)
 Frame = -1

Query: 293 TDGQTEVLNRCLETYLRCFSSEQPKFWSKWLSWAEFCYNTGFHTAAGTTPFEVVYGKPPP 114
           ++GQTEV+NR LE YLRCF  +QP+ W KW+ WAEF YNT  H++   TPFE VYG PPP
Sbjct: 554 SNGQTEVVNRTLEQYLRCFVGDQPQKWLKWIPWAEFSYNTSTHSSTKMTPFEAVYGIPPP 613

Query: 113 RIVSFLPGEIRVQALAESLRSRDQILSHLRFHLERAQ 3
           R+++++PG   VQA+ E LR RD IL  LR +L  AQ
Sbjct: 614 RLLAYVPGTSHVQAVDEYLRDRDAILRELRXNLLLAQ 650


>gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]
          Length = 2749

 Score =  119 bits (299), Expect = 2e-25
 Identities = 53/97 (54%), Positives = 68/97 (70%)
 Frame = -1

Query: 293  TDGQTEVLNRCLETYLRCFSSEQPKFWSKWLSWAEFCYNTGFHTAAGTTPFEVVYGKPPP 114
            TDGQ+EV+N+ +  YLRC + ++P+ W  WLSWAE+CYNT FHTA   TPFEVVYG+PPP
Sbjct: 1591 TDGQSEVVNKVIAMYLRCVTGDRPRAWVDWLSWAEYCYNTSFHTALRATPFEVVYGRPPP 1650

Query: 113  RIVSFLPGEIRVQALAESLRSRDQILSHLRFHLERAQ 3
             I+ +  G  R  A  E LR RD IL+ +R  L +AQ
Sbjct: 1651 PILPYQAGSARTAAAEELLRDRDNILAEVRQRLVQAQ 1687


Top