BLASTX nr result

ID: Salvia21_contig00041440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00041440
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533966.1| pentatricopeptide repeat-containing protein,...   163   2e-38
ref|XP_002311462.1| predicted protein [Populus trichocarpa] gi|2...   161   4e-38
ref|NP_172798.2| pentatricopeptide repeat-containing protein [Ar...   159   2e-37
ref|XP_002890003.1| binding protein [Arabidopsis lyrata subsp. l...   158   4e-37
ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containi...   157   1e-36

>ref|XP_002533966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526049|gb|EEF28413.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 515

 Score =  163 bits (412), Expect = 2e-38
 Identities = 74/111 (66%), Positives = 91/111 (81%)
 Frame = +3

Query: 3   AYRAFTEMVDRNVVSWTAMITGFVANGDLVSARRLFDLAPERDVVLWNRMVSVHIDLGDM 182
           AYR F EM++RNVV+WT+MI GF+   D+ +ARRLF+LAP+RDVVLWN M+S +ID+GD+
Sbjct: 218 AYRVFGEMIERNVVAWTSMIKGFILCNDIETARRLFELAPQRDVVLWNIMISGYIDIGDL 277

Query: 183 VEAKRLFDMMPCKDLMSYNTLLNGYAKNGDVEGCERLFESMQERNYFSWNG 335
           V A+ LF  MP KD+MS+NTLLNGYA  GD+E CERLFE M ERN FSWNG
Sbjct: 278 VRAQELFHKMPNKDVMSWNTLLNGYANGGDIEACERLFEEMPERNVFSWNG 328


>ref|XP_002311462.1| predicted protein [Populus trichocarpa] gi|222851282|gb|EEE88829.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score =  161 bits (408), Expect = 4e-38
 Identities = 73/110 (66%), Positives = 90/110 (81%)
 Frame = +3

Query: 3   AYRAFTEMVDRNVVSWTAMITGFVANGDLVSARRLFDLAPERDVVLWNRMVSVHIDLGDM 182
           AYR F EM++RNV++WTAMI G++   DLV+ARRLFDLAPERD+VLWN M+S +I+  D+
Sbjct: 105 AYRVFGEMIERNVIAWTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDV 164

Query: 183 VEAKRLFDMMPCKDLMSYNTLLNGYAKNGDVEGCERLFESMQERNYFSWN 332
           + A+ LFD MP KD+MS+NT+LNGYA NGDV  CERLFE M ERN FSWN
Sbjct: 165 IRARELFDKMPNKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWN 214


>ref|NP_172798.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|110741720|dbj|BAE98806.1| hypothetical protein
           [Arabidopsis thaliana] gi|332190892|gb|AEE29013.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 474

 Score =  159 bits (403), Expect = 2e-37
 Identities = 70/111 (63%), Positives = 92/111 (82%)
 Frame = +3

Query: 3   AYRAFTEMVDRNVVSWTAMITGFVANGDLVSARRLFDLAPERDVVLWNRMVSVHIDLGDM 182
           A + F EMV++NVV WT+MI G++ N DLVSARR FDL+PERD+VLWN M+S +I++G+M
Sbjct: 47  ANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNM 106

Query: 183 VEAKRLFDMMPCKDLMSYNTLLNGYAKNGDVEGCERLFESMQERNYFSWNG 335
           +EA+ LFD MPC+D+MS+NT+L GYA  GD+E CER+F+ M ERN FSWNG
Sbjct: 107 LEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNG 157


>ref|XP_002890003.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335845|gb|EFH66262.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 471

 Score =  158 bits (400), Expect = 4e-37
 Identities = 70/111 (63%), Positives = 92/111 (82%)
 Frame = +3

Query: 3   AYRAFTEMVDRNVVSWTAMITGFVANGDLVSARRLFDLAPERDVVLWNRMVSVHIDLGDM 182
           A + F EMV++NVV WT+MI G++ N DLVSARR FDL+PERD+VLWN MV+ +I++G+M
Sbjct: 44  ANKVFCEMVEKNVVIWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMVAGYIEMGNM 103

Query: 183 VEAKRLFDMMPCKDLMSYNTLLNGYAKNGDVEGCERLFESMQERNYFSWNG 335
           +EA+ LFD MPC+D+MS+NT+L GYA  GD+E CER+F+ M ERN FSWNG
Sbjct: 104 MEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDEMLERNVFSWNG 154


>ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like, partial [Cucumis sativus]
          Length = 610

 Score =  157 bits (396), Expect = 1e-36
 Identities = 71/111 (63%), Positives = 90/111 (81%)
 Frame = +3

Query: 3   AYRAFTEMVDRNVVSWTAMITGFVANGDLVSARRLFDLAPERDVVLWNRMVSVHIDLGDM 182
           AY+ F  M++RN+V+WT+MI+G++    +  ARRLFDLAPERDVVLWN MVS +I++GDM
Sbjct: 177 AYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDM 236

Query: 183 VEAKRLFDMMPCKDLMSYNTLLNGYAKNGDVEGCERLFESMQERNYFSWNG 335
             A++LFD MP +D MS+NT+LNGYA NGDVE CE+LFE M ERN FSWNG
Sbjct: 237 KAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNG 287



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/101 (38%), Positives = 63/101 (62%)
 Frame = +3

Query: 3   AYRAFTEMVDRNVVSWTAMITGFVANGDLVSARRLFDLAPERDVVLWNRMVSVHIDLGDM 182
           A R F    +R+VV W  M++G++  GD+ +AR+LFD  P RD + WN M++ + + GD+
Sbjct: 208 ARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDV 267

Query: 183 VEAKRLFDMMPCKDLMSYNTLLNGYAKNGDVEGCERLFESM 305
              ++LF+ MP +++ S+N L+ GYA NG      R F+ M
Sbjct: 268 EACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRM 308


Top