BLASTX nr result

ID: Salvia21_contig00041211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00041211
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281425.1| PREDICTED: putative nuclease HARBI1 [Vitis v...    57   2e-06
ref|XP_003543499.1| PREDICTED: putative nuclease HARBI1-like [Gl...    56   3e-06

>ref|XP_002281425.1| PREDICTED: putative nuclease HARBI1 [Vitis vinifera]
           gi|297746131|emb|CBI16187.3| unnamed protein product
           [Vitis vinifera]
          Length = 384

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/68 (47%), Positives = 37/68 (54%)
 Frame = +3

Query: 105 MGPVRGNXXXXXXXXXXXXNSLISGSSEEGCTEWWEVLLKTIAGSPSSSQILDNFRSTFK 284
           MGPVRG                   SSEEG  +WW+   K IAG  SSS+ LD F S FK
Sbjct: 1   MGPVRGYKKRRKIEKREE-------SSEEGSVDWWDEFSKRIAGLLSSSKGLDKFESVFK 53

Query: 285 VSRKTFDY 308
           +SRKTF+Y
Sbjct: 54  ISRKTFNY 61


>ref|XP_003543499.1| PREDICTED: putative nuclease HARBI1-like [Glycine max]
          Length = 393

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/70 (47%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = +3

Query: 105 MGPVRGNXXXXXXXXXXXXNSLISGSSE-EGCTEWWEVLLKTIAG-SPSSSQILDNFRST 278
           MGPVRG             N   SGS E EG  +WW+ L K + G   S S+ LDNF S 
Sbjct: 1   MGPVRGFKKKRKPEKKHDKNGSGSGSPEGEGPVDWWDDLSKRMNGLQQSPSKCLDNFESV 60

Query: 279 FKVSRKTFDY 308
           FK+SRKTF+Y
Sbjct: 61  FKISRKTFEY 70


Top